data_8F10
#
_model_server_result.job_id            CswD3d4_IIIs49nNabMHQw 
_model_server_result.datetime_utc      '2024-11-29 18:42:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f10 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":101}' 
#
_entry.id    8F10 
#
_exptl.entry_id    8F10 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.214 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N,N'-(1,4-phenylene)diacetamide" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.44 
_cell.angle_gamma         90 
_cell.entry_id            8F10 
_cell.length_a            28.15 
_cell.length_b            39.92 
_cell.length_c            42.36 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F10 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C DAL 4 B DAL 3 1_555 B N DTR 5 B DTR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale2 B C DTR 5 B DTR 4 1_555 B N DSG 6 B DSG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 B C DSG 6 B DSG 5 1_555 B N DHI 7 B DHI 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 B C DHI 7 B DHI 6 1_555 B N DCY 8 B DCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 B C DCY 8 B DCY 7 1_555 B N DGL 9 B DGL 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale6 B SG DCY 8 B DCY 7 1_555 I CH WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? 
covale ? covale7 B C DGL 9 B DGL 8 1_555 B N DTY 10 B DTY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale8 B C DTY 10 B DTY 9 1_555 B N DAL 11 B DAL 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 B C DAL 11 B DAL 10 1_555 B N DAL 12 B DAL 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale10 B C DAL 12 B DAL 11 1_555 B N DPN 13 B DPN 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale11 B C DPN 13 B DPN 12 1_555 B N DVA 14 B DVA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale12 B C DVA 14 B DVA 13 1_555 B N DCY 15 B DCY 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale13 B C DCY 15 B DCY 14 1_555 B N DSN 16 B DSN 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale14 B SG DCY 15 B DCY 14 1_555 I CK WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.771 ? 
covale ? covale15 B C DSN 16 B DSN 15 1_555 B N DGL 17 B DGL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale16 B C DGL 17 B DGL 16 1_555 B N DVA 18 B DVA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale17 B C DVA 18 B DVA 17 1_555 B N NH2 19 B NH2 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? 
#
_chem_comp.formula           'C10 H12 N2 O2' 
_chem_comp.formula_weight    192.214 
_chem_comp.id                WHL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N,N'-(1,4-phenylene)diacetamide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CK CJ WHL sing 606 n n 
CJ NB WHL sing 607 n n 
CJ OA WHL doub 608 n n 
NB CC WHL sing 609 n n 
CC CB WHL doub 610 n y 
CC CD WHL sing 611 n y 
CB CA WHL sing 612 n y 
CD CE WHL doub 613 n y 
CA CF WHL doub 614 n y 
CE CF WHL sing 615 n y 
CF NA WHL sing 616 n n 
OB CG WHL doub 617 n n 
NA CG WHL sing 618 n n 
CG CH WHL sing 619 n n 
CA H1 WHL sing 620 n n 
CB H2 WHL sing 621 n n 
NB H3 WHL sing 622 n n 
CD H4 WHL sing 623 n n 
CE H5 WHL sing 624 n n 
CH H6 WHL sing 625 n n 
CH H7 WHL sing 626 n n 
CH H8 WHL sing 627 n n 
CK H9 WHL sing 628 n n 
CK H10 WHL sing 629 n n 
CK H11 WHL sing 630 n n 
NA H12 WHL sing 631 n n 
#
_atom_sites.entry_id                     8F10 
_atom_sites.fract_transf_matrix[1][1]    0.035524 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003386 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02505 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023714 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 201 2 EDO EDO . 
D 3 EDO A 1 202 3 EDO EDO . 
E 4 CL A 1 203 4 CL CL . 
F 5 GOL A 1 204 6 GOL GOL . 
G 5 GOL A 1 205 7 GOL GOL . 
H 3 EDO A 1 206 8 EDO EDO . 
I 6 WHL B 1 101 101 WHL WHL . 
J 3 EDO B 1 102 1 EDO EDO . 
K 7 IMD B 1 103 5 IMD IMD . 
L 8 HOH A 1 301 60 HOH HOH . 
L 8 HOH A 2 302 37 HOH HOH . 
L 8 HOH A 3 303 31 HOH HOH . 
L 8 HOH A 4 304 30 HOH HOH . 
L 8 HOH A 5 305 23 HOH HOH . 
L 8 HOH A 6 306 29 HOH HOH . 
L 8 HOH A 7 307 95 HOH HOH . 
L 8 HOH A 8 308 42 HOH HOH . 
L 8 HOH A 9 309 40 HOH HOH . 
L 8 HOH A 10 310 33 HOH HOH . 
L 8 HOH A 11 311 121 HOH HOH . 
L 8 HOH A 12 312 43 HOH HOH . 
L 8 HOH A 13 313 3 HOH HOH . 
L 8 HOH A 14 314 2 HOH HOH . 
L 8 HOH A 15 315 22 HOH HOH . 
L 8 HOH A 16 316 69 HOH HOH . 
L 8 HOH A 17 317 50 HOH HOH . 
L 8 HOH A 18 318 19 HOH HOH . 
L 8 HOH A 19 319 15 HOH HOH . 
L 8 HOH A 20 320 34 HOH HOH . 
L 8 HOH A 21 321 38 HOH HOH . 
L 8 HOH A 22 322 63 HOH HOH . 
L 8 HOH A 23 323 66 HOH HOH . 
L 8 HOH A 24 324 7 HOH HOH . 
L 8 HOH A 25 325 11 HOH HOH . 
L 8 HOH A 26 326 18 HOH HOH . 
L 8 HOH A 27 327 58 HOH HOH . 
L 8 HOH A 28 328 56 HOH HOH . 
L 8 HOH A 29 329 12 HOH HOH . 
L 8 HOH A 30 330 21 HOH HOH . 
L 8 HOH A 31 331 47 HOH HOH . 
L 8 HOH A 32 332 79 HOH HOH . 
L 8 HOH A 33 333 57 HOH HOH . 
L 8 HOH A 34 334 24 HOH HOH . 
L 8 HOH A 35 335 1 HOH HOH . 
L 8 HOH A 36 336 89 HOH HOH . 
L 8 HOH A 37 337 55 HOH HOH . 
L 8 HOH A 38 338 85 HOH HOH . 
L 8 HOH A 39 339 32 HOH HOH . 
L 8 HOH A 40 340 4 HOH HOH . 
L 8 HOH A 41 341 45 HOH HOH . 
L 8 HOH A 42 342 68 HOH HOH . 
L 8 HOH A 43 343 49 HOH HOH . 
L 8 HOH A 44 344 102 HOH HOH . 
L 8 HOH A 45 345 41 HOH HOH . 
L 8 HOH A 46 346 94 HOH HOH . 
L 8 HOH A 47 347 71 HOH HOH . 
L 8 HOH A 48 348 20 HOH HOH . 
L 8 HOH A 49 349 8 HOH HOH . 
L 8 HOH A 50 350 13 HOH HOH . 
L 8 HOH A 51 351 26 HOH HOH . 
L 8 HOH A 52 352 27 HOH HOH . 
L 8 HOH A 53 353 78 HOH HOH . 
L 8 HOH A 54 354 77 HOH HOH . 
L 8 HOH A 55 355 84 HOH HOH . 
L 8 HOH A 56 356 65 HOH HOH . 
L 8 HOH A 57 357 111 HOH HOH . 
L 8 HOH A 58 358 91 HOH HOH . 
L 8 HOH A 59 359 119 HOH HOH . 
L 8 HOH A 60 360 107 HOH HOH . 
L 8 HOH A 61 361 73 HOH HOH . 
L 8 HOH A 62 362 104 HOH HOH . 
L 8 HOH A 63 363 106 HOH HOH . 
L 8 HOH A 64 364 88 HOH HOH . 
L 8 HOH A 65 365 44 HOH HOH . 
L 8 HOH A 66 366 96 HOH HOH . 
L 8 HOH A 67 367 62 HOH HOH . 
L 8 HOH A 68 368 51 HOH HOH . 
L 8 HOH A 69 369 70 HOH HOH . 
L 8 HOH A 70 370 81 HOH HOH . 
L 8 HOH A 71 371 100 HOH HOH . 
L 8 HOH A 72 372 105 HOH HOH . 
L 8 HOH A 73 373 53 HOH HOH . 
L 8 HOH A 74 374 72 HOH HOH . 
L 8 HOH A 75 375 59 HOH HOH . 
L 8 HOH A 76 376 112 HOH HOH . 
L 8 HOH A 77 377 25 HOH HOH . 
L 8 HOH A 78 378 28 HOH HOH . 
L 8 HOH A 79 379 90 HOH HOH . 
L 8 HOH A 80 380 118 HOH HOH . 
L 8 HOH A 81 381 86 HOH HOH . 
L 8 HOH A 82 382 74 HOH HOH . 
L 8 HOH A 83 383 109 HOH HOH . 
L 8 HOH A 84 384 46 HOH HOH . 
M 8 HOH B 1 201 122 HOH HOH . 
M 8 HOH B 2 202 80 HOH HOH . 
M 8 HOH B 3 203 9 HOH HOH . 
M 8 HOH B 4 204 64 HOH HOH . 
M 8 HOH B 5 205 6 HOH HOH . 
M 8 HOH B 6 206 39 HOH HOH . 
M 8 HOH B 7 207 120 HOH HOH . 
M 8 HOH B 8 208 17 HOH HOH . 
M 8 HOH B 9 209 82 HOH HOH . 
M 8 HOH B 10 210 93 HOH HOH . 
M 8 HOH B 11 211 75 HOH HOH . 
M 8 HOH B 12 212 48 HOH HOH . 
M 8 HOH B 13 213 117 HOH HOH . 
M 8 HOH B 14 214 36 HOH HOH . 
M 8 HOH B 15 215 52 HOH HOH . 
M 8 HOH B 16 216 35 HOH HOH . 
M 8 HOH B 17 217 10 HOH HOH . 
M 8 HOH B 18 218 113 HOH HOH . 
M 8 HOH B 19 219 114 HOH HOH . 
M 8 HOH B 20 220 108 HOH HOH . 
M 8 HOH B 21 221 115 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CA WHL . . . I 6 1.898 -1.32 2.852 1 11.84 ? CA WHL 101 B 1 
HETATM 2 C CB WHL . . . I 6 2.162 0.016 3.144 1 11.7 ? CB WHL 101 B 1 
HETATM 3 N NB WHL . . . I 6 3.664 1.955 2.777 1 10.74 ? NB WHL 101 B 1 
HETATM 4 O OB WHL . . . I 6 4.55 -4.373 1.666 1 15.19 ? OB WHL 101 B 1 
HETATM 5 C CG WHL . . . I 6 3.367 -4.491 1.579 1 14.78 ? CG WHL 101 B 1 
HETATM 6 C CD WHL . . . I 6 4.179 -0.138 1.799 1 11.69 ? CD WHL 101 B 1 
HETATM 7 C CE WHL . . . I 6 3.919 -1.459 1.539 1 11.66 ? CE WHL 101 B 1 
HETATM 8 C CH WHL . . . I 6 2.733 -5.853 1.316 1 12.36 ? CH WHL 101 B 1 
HETATM 9 C CC WHL . . . I 6 3.319 0.568 2.6 1 10.55 ? CC WHL 101 B 1 
HETATM 10 C CF WHL . . . I 6 2.789 -2.032 2.078 1 12.23 ? CF WHL 101 B 1 
HETATM 11 C CJ WHL . . . I 6 3.068 2.838 3.725 1 13.8 ? CJ WHL 101 B 1 
HETATM 12 C CK WHL . . . I 6 3.594 4.268 3.691 1 12.17 ? CK WHL 101 B 1 
HETATM 13 N NA WHL . . . I 6 2.452 -3.413 1.776 1 13.28 ? NA WHL 101 B 1 
HETATM 14 O OA WHL . . . I 6 2.239 2.503 4.525 1 15.01 ? OA WHL 101 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#