data_8F14
#
_model_server_result.job_id            hZglTQ9Qu5eCMQBxbrYSWQ 
_model_server_result.datetime_utc      '2024-11-07 08:38:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f14 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    8F14 
#
_exptl.entry_id    8F14 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8F14 
_cell.length_a            46.158 
_cell.length_b            90.115 
_cell.length_c            92.333 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F14 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C DPR 2 B DPR 2 1_555 B N DTR 3 B DTR 3 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 B C DPR 2 B DPR 2 1_555 B N DTR 3 B DTR 3 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 B C DTR 3 B DTR 3 1_555 B N DGL 4 B DGL 4 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C DTR 3 B DTR 3 1_555 B N DGL 4 B DGL 4 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 B C DGL 4 B DGL 4 1_555 B N DAS 5 B DAS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale6 B C DAS 5 B DAS 5 1_555 B N DCY 6 B DCY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale7 B C DCY 6 B DCY 6 1_555 B N DAL 7 B DAL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale8 B SG DCY 6 B DCY 6 1_555 G CK WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? 
covale ? covale9 B C DAL 7 B DAL 7 1_555 B N DTR 8 B DTR 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 B C DTR 8 B DTR 8 1_555 B N DPN 9 B DPN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale11 B C DPN 9 B DPN 9 1_555 B N DAL 10 B DAL 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale12 B C DAL 10 B DAL 10 1_555 B N DTR 11 B DTR 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale13 B C DTR 11 B DTR 11 1_555 B N DAL 12 B DAL 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale14 B C DAL 12 B DAL 12 1_555 B N DCY 13 B DCY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale15 B C DCY 13 B DCY 13 1_555 B N DTY 14 B DTY 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale16 B SG DCY 13 B DCY 13 1_555 G CH WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? 
covale ? covale17 B C DTY 14 B DTY 14 1_555 B N DSG 15 B DSG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale18 B C DSG 15 B DSG 15 1_555 B N DIL 16 B DIL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale19 B C DIL 16 B DIL 16 1_555 B N NH2 17 B NH2 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 276 n n 
C1 C2 EDO sing 277 n n 
C1 H11 EDO sing 278 n n 
C1 H12 EDO sing 279 n n 
O1 HO1 EDO sing 280 n n 
C2 O2 EDO sing 281 n n 
C2 H21 EDO sing 282 n n 
C2 H22 EDO sing 283 n n 
O2 HO2 EDO sing 284 n n 
#
_atom_sites.entry_id                     8F14 
_atom_sites.fract_transf_matrix[1][1]    0.021665 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011097 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01083 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 201 1 SO4 SO4 . 
D 4 EDO A 1 202 2 EDO EDO . 
E 4 EDO A 1 203 7 EDO EDO . 
F 4 EDO A 1 204 8 EDO EDO . 
G 5 WHL B 1 101 101 WHL WHL . 
H 6 HOH A 1 301 101 HOH HOH . 
H 6 HOH A 2 302 85 HOH HOH . 
H 6 HOH A 3 303 13 HOH HOH . 
H 6 HOH A 4 304 48 HOH HOH . 
H 6 HOH A 5 305 133 HOH HOH . 
H 6 HOH A 6 306 82 HOH HOH . 
H 6 HOH A 7 307 15 HOH HOH . 
H 6 HOH A 8 308 69 HOH HOH . 
H 6 HOH A 9 309 94 HOH HOH . 
H 6 HOH A 10 310 26 HOH HOH . 
H 6 HOH A 11 311 76 HOH HOH . 
H 6 HOH A 12 312 75 HOH HOH . 
H 6 HOH A 13 313 81 HOH HOH . 
H 6 HOH A 14 314 60 HOH HOH . 
H 6 HOH A 15 315 20 HOH HOH . 
H 6 HOH A 16 316 39 HOH HOH . 
H 6 HOH A 17 317 38 HOH HOH . 
H 6 HOH A 18 318 141 HOH HOH . 
H 6 HOH A 19 319 128 HOH HOH . 
H 6 HOH A 20 320 50 HOH HOH . 
H 6 HOH A 21 321 31 HOH HOH . 
H 6 HOH A 22 322 25 HOH HOH . 
H 6 HOH A 23 323 124 HOH HOH . 
H 6 HOH A 24 324 119 HOH HOH . 
H 6 HOH A 25 325 16 HOH HOH . 
H 6 HOH A 26 326 35 HOH HOH . 
H 6 HOH A 27 327 109 HOH HOH . 
H 6 HOH A 28 328 52 HOH HOH . 
H 6 HOH A 29 329 27 HOH HOH . 
H 6 HOH A 30 330 53 HOH HOH . 
H 6 HOH A 31 331 66 HOH HOH . 
H 6 HOH A 32 332 143 HOH HOH . 
H 6 HOH A 33 333 23 HOH HOH . 
H 6 HOH A 34 334 47 HOH HOH . 
H 6 HOH A 35 335 40 HOH HOH . 
H 6 HOH A 36 336 99 HOH HOH . 
H 6 HOH A 37 337 36 HOH HOH . 
H 6 HOH A 38 338 56 HOH HOH . 
H 6 HOH A 39 339 18 HOH HOH . 
H 6 HOH A 40 340 8 HOH HOH . 
H 6 HOH A 41 341 67 HOH HOH . 
H 6 HOH A 42 342 70 HOH HOH . 
H 6 HOH A 43 343 64 HOH HOH . 
H 6 HOH A 44 344 147 HOH HOH . 
H 6 HOH A 45 345 4 HOH HOH . 
H 6 HOH A 46 346 5 HOH HOH . 
H 6 HOH A 47 347 63 HOH HOH . 
H 6 HOH A 48 348 71 HOH HOH . 
H 6 HOH A 49 349 68 HOH HOH . 
H 6 HOH A 50 350 88 HOH HOH . 
H 6 HOH A 51 351 59 HOH HOH . 
H 6 HOH A 52 352 49 HOH HOH . 
H 6 HOH A 53 353 41 HOH HOH . 
H 6 HOH A 54 354 149 HOH HOH . 
H 6 HOH A 55 355 3 HOH HOH . 
H 6 HOH A 56 356 148 HOH HOH . 
H 6 HOH A 57 357 29 HOH HOH . 
H 6 HOH A 58 358 123 HOH HOH . 
H 6 HOH A 59 359 10 HOH HOH . 
H 6 HOH A 60 360 61 HOH HOH . 
H 6 HOH A 61 361 96 HOH HOH . 
H 6 HOH A 62 362 1 HOH HOH . 
H 6 HOH A 63 363 54 HOH HOH . 
H 6 HOH A 64 364 151 HOH HOH . 
H 6 HOH A 65 365 30 HOH HOH . 
H 6 HOH A 66 366 11 HOH HOH . 
H 6 HOH A 67 367 121 HOH HOH . 
H 6 HOH A 68 368 46 HOH HOH . 
H 6 HOH A 69 369 9 HOH HOH . 
H 6 HOH A 70 370 19 HOH HOH . 
H 6 HOH A 71 371 146 HOH HOH . 
H 6 HOH A 72 372 45 HOH HOH . 
H 6 HOH A 73 373 135 HOH HOH . 
H 6 HOH A 74 374 34 HOH HOH . 
H 6 HOH A 75 375 37 HOH HOH . 
H 6 HOH A 76 376 57 HOH HOH . 
H 6 HOH A 77 377 55 HOH HOH . 
H 6 HOH A 78 378 98 HOH HOH . 
H 6 HOH A 79 379 6 HOH HOH . 
H 6 HOH A 80 380 2 HOH HOH . 
H 6 HOH A 81 381 22 HOH HOH . 
H 6 HOH A 82 382 17 HOH HOH . 
H 6 HOH A 83 383 132 HOH HOH . 
H 6 HOH A 84 384 78 HOH HOH . 
H 6 HOH A 85 385 79 HOH HOH . 
H 6 HOH A 86 386 104 HOH HOH . 
H 6 HOH A 87 387 28 HOH HOH . 
H 6 HOH A 88 388 95 HOH HOH . 
H 6 HOH A 89 389 137 HOH HOH . 
H 6 HOH A 90 390 111 HOH HOH . 
H 6 HOH A 91 391 107 HOH HOH . 
H 6 HOH A 92 392 84 HOH HOH . 
H 6 HOH A 93 393 129 HOH HOH . 
H 6 HOH A 94 394 144 HOH HOH . 
H 6 HOH A 95 395 7 HOH HOH . 
H 6 HOH A 96 396 73 HOH HOH . 
H 6 HOH A 97 397 87 HOH HOH . 
H 6 HOH A 98 398 100 HOH HOH . 
H 6 HOH A 99 399 65 HOH HOH . 
H 6 HOH A 100 400 86 HOH HOH . 
H 6 HOH A 101 401 62 HOH HOH . 
H 6 HOH A 102 402 120 HOH HOH . 
H 6 HOH A 103 403 93 HOH HOH . 
H 6 HOH A 104 404 32 HOH HOH . 
H 6 HOH A 105 405 108 HOH HOH . 
H 6 HOH A 106 406 139 HOH HOH . 
H 6 HOH A 107 407 103 HOH HOH . 
H 6 HOH A 108 408 102 HOH HOH . 
H 6 HOH A 109 409 150 HOH HOH . 
H 6 HOH A 110 410 90 HOH HOH . 
H 6 HOH A 111 411 134 HOH HOH . 
H 6 HOH A 112 412 130 HOH HOH . 
H 6 HOH A 113 413 77 HOH HOH . 
H 6 HOH A 114 414 58 HOH HOH . 
H 6 HOH A 115 415 131 HOH HOH . 
H 6 HOH A 116 416 91 HOH HOH . 
H 6 HOH A 117 417 92 HOH HOH . 
H 6 HOH A 118 418 115 HOH HOH . 
H 6 HOH A 119 419 125 HOH HOH . 
H 6 HOH A 120 420 74 HOH HOH . 
H 6 HOH A 121 421 83 HOH HOH . 
I 6 HOH B 1 201 72 HOH HOH . 
I 6 HOH B 2 202 43 HOH HOH . 
I 6 HOH B 3 203 110 HOH HOH . 
I 6 HOH B 4 204 136 HOH HOH . 
I 6 HOH B 5 205 44 HOH HOH . 
I 6 HOH B 6 206 138 HOH HOH . 
I 6 HOH B 7 207 12 HOH HOH . 
I 6 HOH B 8 208 80 HOH HOH . 
I 6 HOH B 9 209 97 HOH HOH . 
I 6 HOH B 10 210 21 HOH HOH . 
I 6 HOH B 11 211 140 HOH HOH . 
I 6 HOH B 12 212 33 HOH HOH . 
I 6 HOH B 13 213 127 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -13.617 -2.221 18.702 1 42.59 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . . . D 4 -12.376 -1.734 18.183 1 40.57 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . . . D 4 -14.624 -2.387 17.574 1 46.64 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . . . D 4 -15.644 -3.31 17.984 1 60.43 ? O2 EDO 202 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#