data_8F22 # _model_server_result.job_id 5weXDGDfDifE4NkypRByJw _model_server_result.datetime_utc '2024-11-15 21:24:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8f22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":300}' # _entry.id 8F22 # _exptl.entry_id 8F22 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 579.667 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Nalpha-{[4-(4-aminobenzene-1-sulfonyl)-2-oxopiperazin-1-yl]acetyl}-N-(4-methoxyphenyl)-N-methyl-L-phenylalaninamide _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 87.17 _cell.angle_beta 78.77 _cell.angle_gamma 60.37 _cell.entry_id 8F22 _cell.length_a 90.951 _cell.length_b 91.186 _cell.length_c 116.266 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8F22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,M,N,O,P,Q,R,S,T,U,V,W,X 1 1 G,H,I,J,K,L,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 45 1_555 B SG CYS 14 B CYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 A SG CYS 218 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 C SG CYS 45 C CYS 45 1_555 D SG CYS 14 D CYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 C SG CYS 198 C CYS 198 1_555 C SG CYS 218 C CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 D SG CYS 45 D CYS 45 1_555 E SG CYS 14 E CYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 J SG CYS 198 J CYS 198 1_555 J SG CYS 218 J CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 K SG CYS 198 K CYS 198 1_555 K SG CYS 218 K CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 L SG CYS 198 L CYS 198 1_555 L SG CYS 218 L CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C29 H33 N5 O6 S' _chem_comp.formula_weight 579.667 _chem_comp.id XBQ _chem_comp.mon_nstd_flag . _chem_comp.name Nalpha-{[4-(4-aminobenzene-1-sulfonyl)-2-oxopiperazin-1-yl]acetyl}-N-(4-methoxyphenyl)-N-methyl-L-phenylalaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O06 S01 XBQ doub 376 n n O01 S01 XBQ doub 377 n n S01 C06 XBQ sing 378 n n S01 N02 XBQ sing 379 n n C05 C04 XBQ doub 380 n y C05 C06 XBQ sing 381 n y C04 C03 XBQ sing 382 n y C06 C01 XBQ doub 383 n y C03 N01 XBQ sing 384 n n C03 C02 XBQ doub 385 n y C01 C02 XBQ sing 386 n y N02 C10 XBQ sing 387 n n N02 C07 XBQ sing 388 n n C10 C09 XBQ sing 389 n n C07 C08 XBQ sing 390 n n C09 N03 XBQ sing 391 n n C08 N03 XBQ sing 392 n n C08 O02 XBQ doub 393 n n N03 C11 XBQ sing 394 n n C20 C19 XBQ doub 395 n y C20 C21 XBQ sing 396 n y O03 C12 XBQ doub 397 n n C19 C18 XBQ sing 398 n y C21 C16 XBQ doub 399 n y C12 C11 XBQ sing 400 n n C12 N04 XBQ sing 401 n n N04 C13 XBQ sing 402 n n C18 C17 XBQ doub 403 n y C16 C17 XBQ sing 404 n y C16 C14 XBQ sing 405 n n C13 C14 XBQ sing 406 n n C13 C15 XBQ sing 407 n n C29 O05 XBQ sing 408 n n C15 O04 XBQ doub 409 n n C15 N05 XBQ sing 410 n n C27 C28 XBQ doub 411 n y C27 C26 XBQ sing 412 n y C28 C22 XBQ sing 413 n y O05 C26 XBQ sing 414 n n C26 C25 XBQ doub 415 n y C22 N05 XBQ sing 416 n n C22 C24 XBQ doub 417 n y N05 C23 XBQ sing 418 n n C25 C24 XBQ sing 419 n y C13 H1 XBQ sing 420 n n C20 H2 XBQ sing 421 n n C21 H3 XBQ sing 422 n n C18 H4 XBQ sing 423 n n C19 H5 XBQ sing 424 n n C10 H6 XBQ sing 425 n n C10 H7 XBQ sing 426 n n C11 H8 XBQ sing 427 n n C11 H9 XBQ sing 428 n n C14 H10 XBQ sing 429 n n C14 H11 XBQ sing 430 n n C17 H12 XBQ sing 431 n n C23 H13 XBQ sing 432 n n C23 H14 XBQ sing 433 n n C23 H15 XBQ sing 434 n n C24 H16 XBQ sing 435 n n C25 H17 XBQ sing 436 n n C27 H18 XBQ sing 437 n n C28 H19 XBQ sing 438 n n C29 H20 XBQ sing 439 n n C29 H21 XBQ sing 440 n n C29 H22 XBQ sing 441 n n C01 H23 XBQ sing 442 n n C02 H24 XBQ sing 443 n n C04 H25 XBQ sing 444 n n C05 H26 XBQ sing 445 n n C07 H27 XBQ sing 446 n n C07 H28 XBQ sing 447 n n C09 H29 XBQ sing 448 n n C09 H30 XBQ sing 449 n n N01 H31 XBQ sing 450 n n N01 H32 XBQ sing 451 n n N04 H33 XBQ sing 452 n n # _atom_sites.entry_id 8F22 _atom_sites.fract_transf_matrix[1][1] 0.010995 _atom_sites.fract_transf_matrix[1][2] -0.006254 _atom_sites.fract_transf_matrix[1][3] -0.002531 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012616 _atom_sites.fract_transf_matrix[2][3] 0.000695 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 XBQ A 1 300 300 XBQ XBQ . N 2 XBQ B 1 300 300 XBQ XBQ . O 2 XBQ C 1 300 300 XBQ XBQ . P 2 XBQ D 1 300 300 XBQ XBQ . Q 2 XBQ E 1 300 300 XBQ XBQ . R 2 XBQ F 1 300 300 XBQ XBQ . S 3 HOH A 1 401 12 HOH HOH . S 3 HOH A 2 402 20 HOH HOH . T 3 HOH B 1 401 13 HOH HOH . T 3 HOH B 2 402 21 HOH HOH . T 3 HOH B 3 403 22 HOH HOH . U 3 HOH C 1 401 16 HOH HOH . U 3 HOH C 2 402 23 HOH HOH . U 3 HOH C 3 403 1 HOH HOH . U 3 HOH C 4 404 19 HOH HOH . U 3 HOH C 5 405 15 HOH HOH . V 3 HOH D 1 401 10 HOH HOH . V 3 HOH D 2 402 6 HOH HOH . V 3 HOH D 3 403 18 HOH HOH . V 3 HOH D 4 404 17 HOH HOH . W 3 HOH E 1 401 3 HOH HOH . W 3 HOH E 2 403 4 HOH HOH . X 3 HOH F 1 401 14 HOH HOH . Y 3 HOH H 1 301 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 XBQ . . . Q 2 -13.62 -26.984 3.887 1 42.77 ? C13 XBQ 300 E 1 HETATM 2 C C20 XBQ . . . Q 2 -10.701 -26.566 0.302 1 42.77 ? C20 XBQ 300 E 1 HETATM 3 C C21 XBQ . . . Q 2 -11.457 -26.124 1.373 1 42.77 ? C21 XBQ 300 E 1 HETATM 4 C C18 XBQ . . . Q 2 -9.867 -28.36 1.63 1 42.77 ? C18 XBQ 300 E 1 HETATM 5 C C16 XBQ . . . Q 2 -11.428 -26.796 2.587 1 42.77 ? C16 XBQ 300 E 1 HETATM 6 C C19 XBQ . . . Q 2 -9.905 -27.684 0.429 1 42.77 ? C19 XBQ 300 E 1 HETATM 7 C C26 XBQ . . . Q 2 -12.831 -31.489 5.788 1 42.77 ? C26 XBQ 300 E 1 HETATM 8 C C10 XBQ . . . Q 2 -17.127 -29.224 -0.575 1 42.77 ? C10 XBQ 300 E 1 HETATM 9 C C11 XBQ . . . Q 2 -16.723 -26.327 1.799 1 42.77 ? C11 XBQ 300 E 1 HETATM 10 C C12 XBQ . . . Q 2 -15.804 -26.98 2.818 1 42.77 ? C12 XBQ 300 E 1 HETATM 11 C C14 XBQ . . . Q 2 -12.245 -26.309 3.758 1 42.77 ? C14 XBQ 300 E 1 HETATM 12 C C15 XBQ . . . Q 2 -14.229 -26.614 5.239 1 42.77 ? C15 XBQ 300 E 1 HETATM 13 C C17 XBQ . . . Q 2 -10.623 -27.919 2.702 1 42.77 ? C17 XBQ 300 E 1 HETATM 14 C C22 XBQ . . . Q 2 -13.784 -28.9 6.056 1 42.77 ? C22 XBQ 300 E 1 HETATM 15 C C23 XBQ . . . Q 2 -14.869 -27.216 7.494 1 42.77 ? C23 XBQ 300 E 1 HETATM 16 C C24 XBQ . . . Q 2 -14.549 -29.864 5.41 1 42.77 ? C24 XBQ 300 E 1 HETATM 17 C C25 XBQ . . . Q 2 -14.073 -31.155 5.273 1 42.77 ? C25 XBQ 300 E 1 HETATM 18 C C27 XBQ . . . Q 2 -12.067 -30.537 6.443 1 42.77 ? C27 XBQ 300 E 1 HETATM 19 C C28 XBQ . . . Q 2 -12.542 -29.245 6.574 1 42.77 ? C28 XBQ 300 E 1 HETATM 20 C C29 XBQ . . . Q 2 -12.192 -33.5 6.886 1 42.77 ? C29 XBQ 300 E 1 HETATM 21 C C01 XBQ . . . Q 2 -17.177 -31.788 -3.303 1 42.77 ? C01 XBQ 300 E 1 HETATM 22 C C02 XBQ . . . Q 2 -17.213 -33.143 -3.029 1 42.77 ? C02 XBQ 300 E 1 HETATM 23 C C03 XBQ . . . Q 2 -18.185 -33.678 -2.177 1 42.77 ? C03 XBQ 300 E 1 HETATM 24 C C04 XBQ . . . Q 2 -19.124 -32.81 -1.608 1 42.77 ? C04 XBQ 300 E 1 HETATM 25 C C05 XBQ . . . Q 2 -19.098 -31.455 -1.885 1 42.77 ? C05 XBQ 300 E 1 HETATM 26 C C06 XBQ . . . Q 2 -18.113 -30.948 -2.719 1 42.77 ? C06 XBQ 300 E 1 HETATM 27 C C07 XBQ . . . Q 2 -16.492 -27.358 -2.026 1 42.77 ? C07 XBQ 300 E 1 HETATM 28 C C08 XBQ . . . Q 2 -16.314 -26.471 -0.751 1 42.77 ? C08 XBQ 300 E 1 HETATM 29 C C09 XBQ . . . Q 2 -17.396 -28.362 0.644 1 42.77 ? C09 XBQ 300 E 1 HETATM 30 N N01 XBQ . . . Q 2 -18.217 -35.028 -1.905 1 42.77 ? N01 XBQ 300 E 1 HETATM 31 N N02 XBQ . . . Q 2 -17.444 -28.454 -1.786 1 42.77 ? N02 XBQ 300 E 1 HETATM 32 N N03 XBQ . . . Q 2 -16.781 -27.032 0.517 1 42.77 ? N03 XBQ 300 E 1 HETATM 33 N N04 XBQ . . . Q 2 -14.571 -26.468 2.918 1 42.77 ? N04 XBQ 300 E 1 HETATM 34 N N05 XBQ . . . Q 2 -14.28 -27.562 6.205 1 42.77 ? N05 XBQ 300 E 1 HETATM 35 O O01 XBQ . . . Q 2 -19.426 -28.772 -3.199 1 42.77 ? O01 XBQ 300 E 1 HETATM 36 O O02 XBQ . . . Q 2 -15.745 -25.186 -0.814 1 42.77 ? O02 XBQ 300 E 1 HETATM 37 O O03 XBQ . . . Q 2 -16.198 -27.91 3.517 1 42.77 ? O03 XBQ 300 E 1 HETATM 38 O O04 XBQ . . . Q 2 -14.67 -25.494 5.423 1 42.77 ? O04 XBQ 300 E 1 HETATM 39 O O05 XBQ . . . Q 2 -12.35 -32.762 5.677 1 42.77 ? O05 XBQ 300 E 1 HETATM 40 O O06 XBQ . . . Q 2 -17.16 -29.018 -4.158 1 42.77 ? O06 XBQ 300 E 1 HETATM 41 S S01 XBQ . . . Q 2 -18.076 -29.225 -3.079 1 42.77 ? S01 XBQ 300 E 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #