data_8F2Y # _model_server_result.job_id xr4HJ6zRVHt-MupEV0DCKA _model_server_result.datetime_utc '2024-11-14 05:56:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8f2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 8F2Y # _exptl.entry_id 8F2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8F2Y _cell.length_a 25.486 _cell.length_b 40.362 _cell.length_c 66.692 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8F2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C MG MG . B MG 101 1_555 D O HOH . B HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc2 C MG MG . B MG 101 1_555 D O HOH . B HOH 215 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc3 C MG MG . B MG 101 1_555 D O HOH . B HOH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 C MG MG . B MG 101 1_555 D O HOH . B HOH 222 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc5 C MG MG . B MG 101 1_555 D O HOH . B HOH 230 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc6 C MG MG . B MG 101 1_555 E O HOH . C HOH 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 B DC 1 1_555 B N1 DG 12 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 B DC 1 1_555 B O6 DG 12 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 B DC 1 1_555 B N2 DG 12 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 B DG 2 1_555 B N3 DC 11 C DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 B DG 2 1_555 B O2 DC 11 C DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 B DG 2 1_555 B N4 DC 11 C DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 B DC 3 1_555 B N1 DG 10 C DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 B DC 3 1_555 B O6 DG 10 C DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 B DC 3 1_555 B N2 DG 10 C DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 B DG 4 1_555 B N3 DC 9 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 B DG 4 1_555 B O2 DC 9 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 B DG 4 1_555 B N4 DC 9 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N1 DA 5 B DA 5 1_555 B N3 DT 8 C DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N6 DA 5 B DA 5 1_555 B O4 DT 8 C DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N3 DT 6 B DT 6 1_555 B N1 DA 7 C DA 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O4 DT 6 B DT 6 1_555 B N6 DA 7 C DA 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N1 DA 7 B DA 7 1_555 B N3 DT 6 C DT 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N6 DA 7 B DA 7 1_555 B O4 DT 6 C DT 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DT 8 B DT 8 1_555 B N1 DA 5 C DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O4 DT 8 B DT 8 1_555 B N6 DA 5 C DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N3 DC 9 B DC 9 1_555 B N1 DG 4 C DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N4 DC 9 B DC 9 1_555 B O6 DG 4 C DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O2 DC 9 B DC 9 1_555 B N2 DG 4 C DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DG 10 B DG 10 1_555 B N3 DC 3 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N2 DG 10 B DG 10 1_555 B O2 DC 3 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O6 DG 10 B DG 10 1_555 B N4 DC 3 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N3 DC 11 B DC 11 1_555 B N1 DG 2 C DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N4 DC 11 B DC 11 1_555 B O6 DG 2 C DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O2 DC 11 B DC 11 1_555 B N2 DG 2 C DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N1 DG 12 B DG 12 1_555 B N3 DC 1 C DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A N2 DG 12 B DG 12 1_555 B O2 DC 1 C DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A O6 DG 12 B DG 12 1_555 B N4 DC 1 C DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8F2Y _atom_sites.fract_transf_matrix[1][1] 0.039237 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024776 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014994 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG B 1 101 1 MG MG . D 3 HOH B 1 201 34 HOH HOH . D 3 HOH B 2 202 20 HOH HOH . D 3 HOH B 3 203 28 HOH HOH . D 3 HOH B 4 204 86 HOH HOH . D 3 HOH B 5 205 5 HOH HOH . D 3 HOH B 6 206 78 HOH HOH . D 3 HOH B 7 207 40 HOH HOH . D 3 HOH B 8 208 3 HOH HOH . D 3 HOH B 9 209 17 HOH HOH . D 3 HOH B 10 210 19 HOH HOH . D 3 HOH B 11 211 29 HOH HOH . D 3 HOH B 12 212 32 HOH HOH . D 3 HOH B 13 213 50 HOH HOH . D 3 HOH B 14 214 73 HOH HOH . D 3 HOH B 15 215 6 HOH HOH . D 3 HOH B 16 216 93 HOH HOH . D 3 HOH B 17 217 12 HOH HOH . D 3 HOH B 18 218 54 HOH HOH . D 3 HOH B 19 219 42 HOH HOH . D 3 HOH B 20 220 8 HOH HOH . D 3 HOH B 21 221 2 HOH HOH . D 3 HOH B 22 222 1 HOH HOH . D 3 HOH B 23 223 15 HOH HOH . D 3 HOH B 24 224 52 HOH HOH . D 3 HOH B 25 225 69 HOH HOH . D 3 HOH B 26 226 80 HOH HOH . D 3 HOH B 27 227 24 HOH HOH . D 3 HOH B 28 228 36 HOH HOH . D 3 HOH B 29 229 33 HOH HOH . D 3 HOH B 30 230 4 HOH HOH . D 3 HOH B 31 231 11 HOH HOH . D 3 HOH B 32 232 92 HOH HOH . D 3 HOH B 33 233 47 HOH HOH . D 3 HOH B 34 234 58 HOH HOH . D 3 HOH B 35 235 63 HOH HOH . D 3 HOH B 36 236 49 HOH HOH . D 3 HOH B 37 237 43 HOH HOH . D 3 HOH B 38 238 44 HOH HOH . D 3 HOH B 39 239 55 HOH HOH . D 3 HOH B 40 240 22 HOH HOH . D 3 HOH B 41 241 87 HOH HOH . D 3 HOH B 42 242 26 HOH HOH . D 3 HOH B 43 243 7 HOH HOH . D 3 HOH B 44 244 21 HOH HOH . D 3 HOH B 45 245 46 HOH HOH . D 3 HOH B 46 246 60 HOH HOH . D 3 HOH B 47 247 71 HOH HOH . D 3 HOH B 48 248 82 HOH HOH . D 3 HOH B 49 249 62 HOH HOH . D 3 HOH B 50 250 75 HOH HOH . D 3 HOH B 51 251 56 HOH HOH . D 3 HOH B 52 252 81 HOH HOH . D 3 HOH B 53 253 67 HOH HOH . D 3 HOH B 54 254 84 HOH HOH . D 3 HOH B 55 255 70 HOH HOH . E 3 HOH C 1 101 77 HOH HOH . E 3 HOH C 2 102 89 HOH HOH . E 3 HOH C 3 103 51 HOH HOH . E 3 HOH C 4 104 85 HOH HOH . E 3 HOH C 5 105 91 HOH HOH . E 3 HOH C 6 106 41 HOH HOH . E 3 HOH C 7 107 39 HOH HOH . E 3 HOH C 8 108 59 HOH HOH . E 3 HOH C 9 109 61 HOH HOH . E 3 HOH C 10 110 83 HOH HOH . E 3 HOH C 11 111 9 HOH HOH . E 3 HOH C 12 112 18 HOH HOH . E 3 HOH C 13 113 23 HOH HOH . E 3 HOH C 14 114 90 HOH HOH . E 3 HOH C 15 115 94 HOH HOH . E 3 HOH C 16 116 68 HOH HOH . E 3 HOH C 17 117 10 HOH HOH . E 3 HOH C 18 118 30 HOH HOH . E 3 HOH C 19 119 53 HOH HOH . E 3 HOH C 20 120 66 HOH HOH . E 3 HOH C 21 121 16 HOH HOH . E 3 HOH C 22 122 65 HOH HOH . E 3 HOH C 23 123 14 HOH HOH . E 3 HOH C 24 124 57 HOH HOH . E 3 HOH C 25 125 13 HOH HOH . E 3 HOH C 26 126 31 HOH HOH . E 3 HOH C 27 127 95 HOH HOH . E 3 HOH C 28 128 25 HOH HOH . E 3 HOH C 29 129 79 HOH HOH . E 3 HOH C 30 130 48 HOH HOH . E 3 HOH C 31 131 72 HOH HOH . E 3 HOH C 32 132 35 HOH HOH . E 3 HOH C 33 133 45 HOH HOH . E 3 HOH C 34 134 27 HOH HOH . E 3 HOH C 35 135 38 HOH HOH . E 3 HOH C 36 136 37 HOH HOH . E 3 HOH C 37 137 76 HOH HOH . E 3 HOH C 38 138 74 HOH HOH . E 3 HOH C 39 139 64 HOH HOH . E 3 HOH C 40 140 88 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.455 _atom_site.Cartn_y 29.022 _atom_site.Cartn_z 20.225 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #