data_8F3P
#
_model_server_result.job_id            AqOkgO1o0kx7CbBs5avywQ 
_model_server_result.datetime_utc      '2024-11-26 06:34:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f3p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    8F3P 
#
_exptl.entry_id    8F3P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              336.406 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'OPEN FORM - PENICILLIN G' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               R464A 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     3.4.16.4 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8F3P 
_cell.length_a            191.741 
_cell.length_b            191.741 
_cell.length_c            156.39 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F3P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OG 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             389 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              422 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C7 
_struct_conn.ptnr2_label_comp_id            PNM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             PNM 
_struct_conn.ptnr2_auth_seq_id              701 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.357 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C16 H20 N2 O4 S' 
_chem_comp.formula_weight    336.406 
_chem_comp.id                PNM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OPEN FORM - PENICILLIN G' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O8 C7 PNM doub 247 n n 
C7 C6 PNM sing 248 n n 
C7 HC7 PNM sing 249 n n 
N4 C3 PNM sing 250 n n 
N4 C5 PNM sing 251 n n 
N4 H4 PNM sing 252 n n 
C3 C11 PNM sing 253 n n 
C3 C2 PNM sing 254 n n 
C3 HC3 PNM sing 255 n n 
C11 O13 PNM sing 256 n n 
C11 O12 PNM doub 257 n n 
O13 HXT PNM sing 258 n n 
C2 C10 PNM sing 259 n n 
C2 C9 PNM sing 260 n n 
C2 S1 PNM sing 261 n n 
C10 H101 PNM sing 262 n n 
C10 H102 PNM sing 263 n n 
C10 H103 PNM sing 264 n n 
C9 HC91 PNM sing 265 n n 
C9 HC92 PNM sing 266 n n 
C9 HC93 PNM sing 267 n n 
S1 C5 PNM sing 268 n n 
C5 C6 PNM sing 269 n n 
C5 HC5 PNM sing 270 n n 
C6 N14 PNM sing 271 n n 
C6 HC6 PNM sing 272 n n 
N14 C15 PNM sing 273 n n 
N14 H14 PNM sing 274 n n 
C15 O16 PNM doub 275 n n 
C15 C17 PNM sing 276 n n 
C17 C18 PNM sing 277 n n 
C17 H171 PNM sing 278 n n 
C17 H172 PNM sing 279 n n 
C18 C19 PNM doub 280 n y 
C18 C23 PNM sing 281 n y 
C19 C20 PNM sing 282 n y 
C19 H19 PNM sing 283 n n 
C20 C21 PNM doub 284 n y 
C20 H20 PNM sing 285 n n 
C21 C22 PNM sing 286 n y 
C21 H21 PNM sing 287 n n 
C22 C23 PNM doub 288 n y 
C22 H22 PNM sing 289 n n 
C23 H23 PNM sing 290 n n 
#
_atom_sites.entry_id                     8F3P 
_atom_sites.fract_transf_matrix[1][1]    0.005215 
_atom_sites.fract_transf_matrix[1][2]    0.003011 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006022 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006394 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PNM A 1 701 422 PNM SER . 
C 3 SO4 A 1 702 1 SO4 SO4 . 
D 3 SO4 A 1 703 2 SO4 SO4 . 
E 3 SO4 A 1 704 3 SO4 SO4 . 
F 3 SO4 A 1 705 4 SO4 SO4 . 
G 3 SO4 A 1 706 5 SO4 SO4 . 
H 3 SO4 A 1 707 6 SO4 SO4 . 
I 3 SO4 A 1 708 7 SO4 SO4 . 
J 3 SO4 A 1 709 8 SO4 SO4 . 
K 3 SO4 A 1 710 9 SO4 SO4 . 
L 3 SO4 A 1 711 10 SO4 SO4 . 
M 3 SO4 A 1 712 15 SO4 SO4 . 
N 3 SO4 A 1 713 16 SO4 SO4 . 
O 3 SO4 A 1 714 17 SO4 SO4 . 
P 3 SO4 A 1 715 18 SO4 SO4 . 
Q 3 SO4 A 1 716 19 SO4 SO4 . 
R 3 SO4 A 1 717 24 SO4 SO4 . 
S 4 HOH A 1 801 136 HOH HOH . 
S 4 HOH A 2 802 116 HOH HOH . 
S 4 HOH A 3 803 113 HOH HOH . 
S 4 HOH A 4 804 112 HOH HOH . 
S 4 HOH A 5 805 152 HOH HOH . 
S 4 HOH A 6 806 172 HOH HOH . 
S 4 HOH A 7 807 155 HOH HOH . 
S 4 HOH A 8 808 18 HOH HOH . 
S 4 HOH A 9 809 58 HOH HOH . 
S 4 HOH A 10 810 123 HOH HOH . 
S 4 HOH A 11 811 84 HOH HOH . 
S 4 HOH A 12 812 130 HOH HOH . 
S 4 HOH A 13 813 186 HOH HOH . 
S 4 HOH A 14 814 185 HOH HOH . 
S 4 HOH A 15 815 109 HOH HOH . 
S 4 HOH A 16 816 142 HOH HOH . 
S 4 HOH A 17 817 169 HOH HOH . 
S 4 HOH A 18 818 53 HOH HOH . 
S 4 HOH A 19 819 1 HOH HOH . 
S 4 HOH A 20 820 187 HOH HOH . 
S 4 HOH A 21 821 156 HOH HOH . 
S 4 HOH A 22 822 106 HOH HOH . 
S 4 HOH A 23 823 188 HOH HOH . 
S 4 HOH A 24 824 198 HOH HOH . 
S 4 HOH A 25 825 148 HOH HOH . 
S 4 HOH A 26 826 131 HOH HOH . 
S 4 HOH A 27 827 144 HOH HOH . 
S 4 HOH A 28 828 89 HOH HOH . 
S 4 HOH A 29 829 36 HOH HOH . 
S 4 HOH A 30 830 147 HOH HOH . 
S 4 HOH A 31 831 16 HOH HOH . 
S 4 HOH A 32 832 193 HOH HOH . 
S 4 HOH A 33 833 137 HOH HOH . 
S 4 HOH A 34 834 4 HOH HOH . 
S 4 HOH A 35 835 98 HOH HOH . 
S 4 HOH A 36 836 143 HOH HOH . 
S 4 HOH A 37 837 146 HOH HOH . 
S 4 HOH A 38 838 111 HOH HOH . 
S 4 HOH A 39 839 174 HOH HOH . 
S 4 HOH A 40 840 23 HOH HOH . 
S 4 HOH A 41 841 160 HOH HOH . 
S 4 HOH A 42 842 22 HOH HOH . 
S 4 HOH A 43 843 196 HOH HOH . 
S 4 HOH A 44 844 138 HOH HOH . 
S 4 HOH A 45 845 32 HOH HOH . 
S 4 HOH A 46 846 93 HOH HOH . 
S 4 HOH A 47 847 163 HOH HOH . 
S 4 HOH A 48 848 97 HOH HOH . 
S 4 HOH A 49 849 164 HOH HOH . 
S 4 HOH A 50 850 67 HOH HOH . 
S 4 HOH A 51 851 82 HOH HOH . 
S 4 HOH A 52 852 161 HOH HOH . 
S 4 HOH A 53 853 95 HOH HOH . 
S 4 HOH A 54 854 80 HOH HOH . 
S 4 HOH A 55 855 182 HOH HOH . 
S 4 HOH A 56 856 139 HOH HOH . 
S 4 HOH A 57 857 190 HOH HOH . 
S 4 HOH A 58 858 171 HOH HOH . 
S 4 HOH A 59 859 192 HOH HOH . 
S 4 HOH A 60 860 158 HOH HOH . 
S 4 HOH A 61 861 87 HOH HOH . 
S 4 HOH A 62 862 184 HOH HOH . 
S 4 HOH A 63 863 78 HOH HOH . 
S 4 HOH A 64 864 94 HOH HOH . 
S 4 HOH A 65 865 170 HOH HOH . 
S 4 HOH A 66 866 165 HOH HOH . 
S 4 HOH A 67 867 200 HOH HOH . 
S 4 HOH A 68 868 72 HOH HOH . 
S 4 HOH A 69 869 92 HOH HOH . 
S 4 HOH A 70 870 86 HOH HOH . 
S 4 HOH A 71 871 177 HOH HOH . 
S 4 HOH A 72 872 151 HOH HOH . 
S 4 HOH A 73 873 191 HOH HOH . 
S 4 HOH A 74 874 179 HOH HOH . 
S 4 HOH A 75 875 178 HOH HOH . 
S 4 HOH A 76 876 201 HOH HOH . 
S 4 HOH A 77 877 167 HOH HOH . 
S 4 HOH A 78 878 46 HOH HOH . 
S 4 HOH A 79 879 91 HOH HOH . 
S 4 HOH A 80 880 42 HOH HOH . 
S 4 HOH A 81 881 90 HOH HOH . 
S 4 HOH A 82 882 145 HOH HOH . 
S 4 HOH A 83 883 149 HOH HOH . 
S 4 HOH A 84 884 197 HOH HOH . 
S 4 HOH A 85 885 69 HOH HOH . 
S 4 HOH A 86 886 162 HOH HOH . 
S 4 HOH A 87 887 34 HOH HOH . 
S 4 HOH A 88 888 199 HOH HOH . 
S 4 HOH A 89 889 157 HOH HOH . 
S 4 HOH A 90 890 141 HOH HOH . 
S 4 HOH A 91 891 166 HOH HOH . 
S 4 HOH A 92 892 83 HOH HOH . 
S 4 HOH A 93 893 195 HOH HOH . 
S 4 HOH A 94 894 168 HOH HOH . 
S 4 HOH A 95 895 194 HOH HOH . 
S 4 HOH A 96 896 180 HOH HOH . 
S 4 HOH A 97 897 181 HOH HOH . 
S 4 HOH A 98 898 183 HOH HOH . 
S 4 HOH A 99 899 189 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O8 PNM . . . B 2 26.133 113.649 32.615 0.97 55.86 ? O8 PNM 701 A 1 
HETATM 2 C C7 PNM . . . B 2 25.92 114.07 31.483 0.97 44.64 ? C7 PNM 701 A 1 
HETATM 3 N N4 PNM . . . B 2 26.057 116.695 31.491 0.97 44.27 ? N4 PNM 701 A 1 
HETATM 4 C C3 PNM . . . B 2 25.631 117.519 32.624 0.97 50.87 ? C3 PNM 701 A 1 
HETATM 5 C C11 PNM . . . B 2 26.839 118.276 33.085 0.97 54.53 ? C11 PNM 701 A 1 
HETATM 6 O O13 PNM . . . B 2 26.747 118.819 34.222 0.97 54.38 ? O13 PNM 701 A 1 
HETATM 7 O O12 PNM . . . B 2 27.806 118.272 32.269 0.97 57.49 ? O12 PNM 701 A 1 
HETATM 8 C C2 PNM . . . B 2 24.479 118.426 32.156 0.97 48.61 ? C2 PNM 701 A 1 
HETATM 9 C C10 PNM . . . B 2 23.622 118.983 33.301 0.97 45.66 ? C10 PNM 701 A 1 
HETATM 10 C C9 PNM . . . B 2 24.953 119.54 31.225 0.97 46.91 ? C9 PNM 701 A 1 
HETATM 11 S S1 PNM . . . B 2 23.453 117.265 31.193 0.97 56.1 ? S1 PNM 701 A 1 
HETATM 12 C C5 PNM . . . B 2 24.871 116.195 30.783 0.97 49.62 ? C5 PNM 701 A 1 
HETATM 13 C C6 PNM . . . B 2 24.608 114.719 31.094 0.97 44.87 ? C6 PNM 701 A 1 
HETATM 14 N N14 PNM . . . B 2 23.624 114.478 32.121 0.97 50.03 ? N14 PNM 701 A 1 
HETATM 15 C C15 PNM . . . B 2 22.318 114.077 31.858 0.97 50.52 ? C15 PNM 701 A 1 
HETATM 16 O O16 PNM . . . B 2 21.851 113.908 30.736 0.97 63.48 ? O16 PNM 701 A 1 
HETATM 17 C C17 PNM . . . B 2 21.51 113.866 33.123 0.97 47.33 ? C17 PNM 701 A 1 
HETATM 18 C C18 PNM . . . B 2 20.95 115.12 33.734 0.97 41.47 ? C18 PNM 701 A 1 
HETATM 19 C C19 PNM . . . B 2 20.165 115.969 32.968 0.97 59.67 ? C19 PNM 701 A 1 
HETATM 20 C C20 PNM . . . B 2 19.649 117.13 33.544 0.97 65.85 ? C20 PNM 701 A 1 
HETATM 21 C C21 PNM . . . B 2 19.919 117.427 34.88 0.97 64.88 ? C21 PNM 701 A 1 
HETATM 22 C C22 PNM . . . B 2 20.705 116.563 35.64 0.97 67.72 ? C22 PNM 701 A 1 
HETATM 23 C C23 PNM . . . B 2 21.222 115.403 35.062 0.97 56.4 ? C23 PNM 701 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#