data_8F3W
#
_model_server_result.job_id            P3XRopNndeqsT2O-kEitPA 
_model_server_result.datetime_utc      '2024-10-11 09:30:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f3w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    8F3W 
#
_exptl.entry_id    8F3W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              336.406 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'OPEN FORM - PENICILLIN G' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               624KEKQDVK630-->PAPAPAP 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     3.4.16.4 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8F3W 
_cell.length_a            192.948 
_cell.length_b            192.948 
_cell.length_c            155.949 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F3W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OG 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             389 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              422 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C7 
_struct_conn.ptnr2_label_comp_id            PNM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             PNM 
_struct_conn.ptnr2_auth_seq_id              701 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.36 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C16 H20 N2 O4 S' 
_chem_comp.formula_weight    336.406 
_chem_comp.id                PNM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OPEN FORM - PENICILLIN G' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O8 C7 PNM doub 247 n n 
C7 C6 PNM sing 248 n n 
C7 HC7 PNM sing 249 n n 
N4 C3 PNM sing 250 n n 
N4 C5 PNM sing 251 n n 
N4 H4 PNM sing 252 n n 
C3 C11 PNM sing 253 n n 
C3 C2 PNM sing 254 n n 
C3 HC3 PNM sing 255 n n 
C11 O13 PNM sing 256 n n 
C11 O12 PNM doub 257 n n 
O13 HXT PNM sing 258 n n 
C2 C10 PNM sing 259 n n 
C2 C9 PNM sing 260 n n 
C2 S1 PNM sing 261 n n 
C10 H101 PNM sing 262 n n 
C10 H102 PNM sing 263 n n 
C10 H103 PNM sing 264 n n 
C9 HC91 PNM sing 265 n n 
C9 HC92 PNM sing 266 n n 
C9 HC93 PNM sing 267 n n 
S1 C5 PNM sing 268 n n 
C5 C6 PNM sing 269 n n 
C5 HC5 PNM sing 270 n n 
C6 N14 PNM sing 271 n n 
C6 HC6 PNM sing 272 n n 
N14 C15 PNM sing 273 n n 
N14 H14 PNM sing 274 n n 
C15 O16 PNM doub 275 n n 
C15 C17 PNM sing 276 n n 
C17 C18 PNM sing 277 n n 
C17 H171 PNM sing 278 n n 
C17 H172 PNM sing 279 n n 
C18 C19 PNM doub 280 n y 
C18 C23 PNM sing 281 n y 
C19 C20 PNM sing 282 n y 
C19 H19 PNM sing 283 n n 
C20 C21 PNM doub 284 n y 
C20 H20 PNM sing 285 n n 
C21 C22 PNM sing 286 n y 
C21 H21 PNM sing 287 n n 
C22 C23 PNM doub 288 n y 
C22 H22 PNM sing 289 n n 
C23 H23 PNM sing 290 n n 
#
_atom_sites.entry_id                     8F3W 
_atom_sites.fract_transf_matrix[1][1]    0.005183 
_atom_sites.fract_transf_matrix[1][2]    0.002992 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005985 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006412 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PNM A 1 701 422 PNM SER . 
C 3 SO4 A 1 702 22 SO4 SO4 . 
D 3 SO4 A 1 703 23 SO4 SO4 . 
E 3 SO4 A 1 704 24 SO4 SO4 . 
F 3 SO4 A 1 705 25 SO4 SO4 . 
G 3 SO4 A 1 706 26 SO4 SO4 . 
H 3 SO4 A 1 707 27 SO4 SO4 . 
I 3 SO4 A 1 708 28 SO4 SO4 . 
J 3 SO4 A 1 709 29 SO4 SO4 . 
K 3 SO4 A 1 710 31 SO4 SO4 . 
L 3 SO4 A 1 711 32 SO4 SO4 . 
M 3 SO4 A 1 712 33 SO4 SO4 . 
N 3 SO4 A 1 713 34 SO4 SO4 . 
O 3 SO4 A 1 714 35 SO4 SO4 . 
P 3 SO4 A 1 715 36 SO4 SO4 . 
Q 3 SO4 A 1 716 37 SO4 SO4 . 
R 3 SO4 A 1 717 39 SO4 SO4 . 
S 3 SO4 A 1 718 40 SO4 SO4 . 
T 3 SO4 A 1 719 45 SO4 SO4 . 
U 3 SO4 A 1 720 46 SO4 SO4 . 
V 3 SO4 A 1 721 48 SO4 SO4 . 
W 3 SO4 A 1 722 52 SO4 SO4 . 
X 4 HOH A 1 801 99 HOH HOH . 
X 4 HOH A 2 802 6 HOH HOH . 
X 4 HOH A 3 803 19 HOH HOH . 
X 4 HOH A 4 804 111 HOH HOH . 
X 4 HOH A 5 805 152 HOH HOH . 
X 4 HOH A 6 806 39 HOH HOH . 
X 4 HOH A 7 807 32 HOH HOH . 
X 4 HOH A 8 808 20 HOH HOH . 
X 4 HOH A 9 809 4 HOH HOH . 
X 4 HOH A 10 810 31 HOH HOH . 
X 4 HOH A 11 811 3 HOH HOH . 
X 4 HOH A 12 812 45 HOH HOH . 
X 4 HOH A 13 813 101 HOH HOH . 
X 4 HOH A 14 814 56 HOH HOH . 
X 4 HOH A 15 815 41 HOH HOH . 
X 4 HOH A 16 816 16 HOH HOH . 
X 4 HOH A 17 817 131 HOH HOH . 
X 4 HOH A 18 818 2 HOH HOH . 
X 4 HOH A 19 819 10 HOH HOH . 
X 4 HOH A 20 820 1 HOH HOH . 
X 4 HOH A 21 821 137 HOH HOH . 
X 4 HOH A 22 822 34 HOH HOH . 
X 4 HOH A 23 823 46 HOH HOH . 
X 4 HOH A 24 824 40 HOH HOH . 
X 4 HOH A 25 825 27 HOH HOH . 
X 4 HOH A 26 826 120 HOH HOH . 
X 4 HOH A 27 827 110 HOH HOH . 
X 4 HOH A 28 828 92 HOH HOH . 
X 4 HOH A 29 829 11 HOH HOH . 
X 4 HOH A 30 830 5 HOH HOH . 
X 4 HOH A 31 831 139 HOH HOH . 
X 4 HOH A 32 832 128 HOH HOH . 
X 4 HOH A 33 833 52 HOH HOH . 
X 4 HOH A 34 834 154 HOH HOH . 
X 4 HOH A 35 835 14 HOH HOH . 
X 4 HOH A 36 836 78 HOH HOH . 
X 4 HOH A 37 837 25 HOH HOH . 
X 4 HOH A 38 838 127 HOH HOH . 
X 4 HOH A 39 839 8 HOH HOH . 
X 4 HOH A 40 840 145 HOH HOH . 
X 4 HOH A 41 841 61 HOH HOH . 
X 4 HOH A 42 842 12 HOH HOH . 
X 4 HOH A 43 843 140 HOH HOH . 
X 4 HOH A 44 844 82 HOH HOH . 
X 4 HOH A 45 845 115 HOH HOH . 
X 4 HOH A 46 846 9 HOH HOH . 
X 4 HOH A 47 847 119 HOH HOH . 
X 4 HOH A 48 848 91 HOH HOH . 
X 4 HOH A 49 849 135 HOH HOH . 
X 4 HOH A 50 850 138 HOH HOH . 
X 4 HOH A 51 851 48 HOH HOH . 
X 4 HOH A 52 852 125 HOH HOH . 
X 4 HOH A 53 853 77 HOH HOH . 
X 4 HOH A 54 854 113 HOH HOH . 
X 4 HOH A 55 855 136 HOH HOH . 
X 4 HOH A 56 856 148 HOH HOH . 
X 4 HOH A 57 857 146 HOH HOH . 
X 4 HOH A 58 858 79 HOH HOH . 
X 4 HOH A 59 859 144 HOH HOH . 
X 4 HOH A 60 860 93 HOH HOH . 
X 4 HOH A 61 861 117 HOH HOH . 
X 4 HOH A 62 862 155 HOH HOH . 
X 4 HOH A 63 863 147 HOH HOH . 
X 4 HOH A 64 864 114 HOH HOH . 
X 4 HOH A 65 865 149 HOH HOH . 
X 4 HOH A 66 866 43 HOH HOH . 
X 4 HOH A 67 867 71 HOH HOH . 
X 4 HOH A 68 868 150 HOH HOH . 
X 4 HOH A 69 869 151 HOH HOH . 
X 4 HOH A 70 870 143 HOH HOH . 
X 4 HOH A 71 871 153 HOH HOH . 
X 4 HOH A 72 872 142 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O8 PNM . . . B 2 10.317 -87.029 -45.212 1 67.34 ? O8 PNM 701 A 1 
HETATM 2 C C7 PNM . . . B 2 9.979 -87.132 -46.387 1 58.38 ? C7 PNM 701 A 1 
HETATM 3 N N4 PNM . . . B 2 7.783 -85.73 -46.522 1 55.94 ? N4 PNM 701 A 1 
HETATM 4 C C3 PNM . . . B 2 6.912 -85.722 -45.344 1 58.79 ? C3 PNM 701 A 1 
HETATM 5 C C11 PNM . . . B 2 6.869 -84.311 -44.844 1 63.45 ? C11 PNM 701 A 1 
HETATM 6 O O13 PNM . . . B 2 6.428 -84.161 -43.67 1 60.17 ? O13 PNM 701 A 1 
HETATM 7 O O12 PNM . . . B 2 7.287 -83.445 -45.664 1 64.44 ? O12 PNM 701 A 1 
HETATM 8 C C2 PNM . . . B 2 5.535 -86.281 -45.753 1 53.49 ? C2 PNM 701 A 1 
HETATM 9 C C10 PNM . . . B 2 4.687 -86.81 -44.59 1 56.97 ? C10 PNM 701 A 1 
HETATM 10 C C9 PNM . . . B 2 4.725 -85.297 -46.596 1 56.15 ? C9 PNM 701 A 1 
HETATM 11 S S1 PNM . . . B 2 6.013 -87.719 -46.775 1 66.35 ? S1 PNM 701 A 1 
HETATM 12 C C5 PNM . . . B 2 7.648 -87.031 -47.188 1 52.02 ? C5 PNM 701 A 1 
HETATM 13 C C6 PNM . . . B 2 8.795 -87.972 -46.82 1 57.38 ? C6 PNM 701 A 1 
HETATM 14 N N14 PNM . . . B 2 8.47 -88.937 -45.798 1 68.38 ? N14 PNM 701 A 1 
HETATM 15 C C15 PNM . . . B 2 8.128 -90.257 -46.076 1 70.74 ? C15 PNM 701 A 1 
HETATM 16 O O16 PNM . . . B 2 8.051 -90.732 -47.205 1 72.23 ? O16 PNM 701 A 1 
HETATM 17 C C17 PNM . . . B 2 7.861 -91.06 -44.815 1 62 ? C17 PNM 701 A 1 
HETATM 18 C C18 PNM . . . B 2 6.48 -90.914 -44.233 1 47.77 ? C18 PNM 701 A 1 
HETATM 19 C C19 PNM . . . B 2 5.367 -91.181 -45.015 1 78.22 ? C19 PNM 701 A 1 
HETATM 20 C C20 PNM . . . B 2 4.093 -91.047 -44.462 1 76.13 ? C20 PNM 701 A 1 
HETATM 21 C C21 PNM . . . B 2 3.943 -90.652 -43.133 1 67.44 ? C21 PNM 701 A 1 
HETATM 22 C C22 PNM . . . B 2 5.069 -90.392 -42.356 1 70.27 ? C22 PNM 701 A 1 
HETATM 23 C C23 PNM . . . B 2 6.344 -90.526 -42.909 1 71.73 ? C23 PNM 701 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           23 
#