data_8F57
#
_model_server_result.job_id            dGEygyNK3hwMFylze3Ywmg 
_model_server_result.datetime_utc      '2024-10-15 05:20:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f57 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":505}' 
#
_entry.id    8F57 
#
_exptl.entry_id    8F57 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8F57 
_cell.length_a            174.907 
_cell.length_b            174.907 
_cell.length_c            123.252 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F57 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 123.252 
5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 123.252 
6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 123.252 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     8F57 
_atom_sites.fract_transf_matrix[1][1]    0.005717 
_atom_sites.fract_transf_matrix[1][2]    0.003301 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006602 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008113 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 501 504 DMS DMS . 
C 3 XEL A 1 502 508 XEL 271 . 
D 4 PEG A 1 503 509 PEG PEG . 
E 2 DMS A 1 504 510 DMS DMS . 
F 2 DMS A 1 505 511 DMS DMS . 
G 2 DMS A 1 506 512 DMS DMS . 
H 2 DMS A 1 507 513 DMS DMS . 
I 5 GOL A 1 508 14 GOL GOL . 
J 5 GOL A 1 509 15 GOL GOL . 
K 5 GOL A 1 510 16 GOL GOL . 
L 6 HOH A 1 601 414 HOH HOH . 
L 6 HOH A 2 602 506 HOH HOH . 
L 6 HOH A 3 603 62 HOH HOH . 
L 6 HOH A 4 604 159 HOH HOH . 
L 6 HOH A 5 605 140 HOH HOH . 
L 6 HOH A 6 606 418 HOH HOH . 
L 6 HOH A 7 607 432 HOH HOH . 
L 6 HOH A 8 608 477 HOH HOH . 
L 6 HOH A 9 609 42 HOH HOH . 
L 6 HOH A 10 610 126 HOH HOH . 
L 6 HOH A 11 611 439 HOH HOH . 
L 6 HOH A 12 612 483 HOH HOH . 
L 6 HOH A 13 613 114 HOH HOH . 
L 6 HOH A 14 614 33 HOH HOH . 
L 6 HOH A 15 615 409 HOH HOH . 
L 6 HOH A 16 616 56 HOH HOH . 
L 6 HOH A 17 617 424 HOH HOH . 
L 6 HOH A 18 618 34 HOH HOH . 
L 6 HOH A 19 619 102 HOH HOH . 
L 6 HOH A 20 620 47 HOH HOH . 
L 6 HOH A 21 621 422 HOH HOH . 
L 6 HOH A 22 622 68 HOH HOH . 
L 6 HOH A 23 623 117 HOH HOH . 
L 6 HOH A 24 624 490 HOH HOH . 
L 6 HOH A 25 625 20 HOH HOH . 
L 6 HOH A 26 626 17 HOH HOH . 
L 6 HOH A 27 627 6 HOH HOH . 
L 6 HOH A 28 628 366 HOH HOH . 
L 6 HOH A 29 629 421 HOH HOH . 
L 6 HOH A 30 630 148 HOH HOH . 
L 6 HOH A 31 631 52 HOH HOH . 
L 6 HOH A 32 632 296 HOH HOH . 
L 6 HOH A 33 633 46 HOH HOH . 
L 6 HOH A 34 634 482 HOH HOH . 
L 6 HOH A 35 635 8 HOH HOH . 
L 6 HOH A 36 636 35 HOH HOH . 
L 6 HOH A 37 637 73 HOH HOH . 
L 6 HOH A 38 638 134 HOH HOH . 
L 6 HOH A 39 639 84 HOH HOH . 
L 6 HOH A 40 640 423 HOH HOH . 
L 6 HOH A 41 641 41 HOH HOH . 
L 6 HOH A 42 642 86 HOH HOH . 
L 6 HOH A 43 643 410 HOH HOH . 
L 6 HOH A 44 644 14 HOH HOH . 
L 6 HOH A 45 645 129 HOH HOH . 
L 6 HOH A 46 646 53 HOH HOH . 
L 6 HOH A 47 647 104 HOH HOH . 
L 6 HOH A 48 648 123 HOH HOH . 
L 6 HOH A 49 649 66 HOH HOH . 
L 6 HOH A 50 650 71 HOH HOH . 
L 6 HOH A 51 651 119 HOH HOH . 
L 6 HOH A 52 652 1 HOH HOH . 
L 6 HOH A 53 653 150 HOH HOH . 
L 6 HOH A 54 654 15 HOH HOH . 
L 6 HOH A 55 655 18 HOH HOH . 
L 6 HOH A 56 656 449 HOH HOH . 
L 6 HOH A 57 657 438 HOH HOH . 
L 6 HOH A 58 658 88 HOH HOH . 
L 6 HOH A 59 659 90 HOH HOH . 
L 6 HOH A 60 660 3 HOH HOH . 
L 6 HOH A 61 661 373 HOH HOH . 
L 6 HOH A 62 662 113 HOH HOH . 
L 6 HOH A 63 663 110 HOH HOH . 
L 6 HOH A 64 664 152 HOH HOH . 
L 6 HOH A 65 665 471 HOH HOH . 
L 6 HOH A 66 666 466 HOH HOH . 
L 6 HOH A 67 667 115 HOH HOH . 
L 6 HOH A 68 668 165 HOH HOH . 
L 6 HOH A 69 669 22 HOH HOH . 
L 6 HOH A 70 670 184 HOH HOH . 
L 6 HOH A 71 671 106 HOH HOH . 
L 6 HOH A 72 672 105 HOH HOH . 
L 6 HOH A 73 673 24 HOH HOH . 
L 6 HOH A 74 674 51 HOH HOH . 
L 6 HOH A 75 675 420 HOH HOH . 
L 6 HOH A 76 676 95 HOH HOH . 
L 6 HOH A 77 677 29 HOH HOH . 
L 6 HOH A 78 678 209 HOH HOH . 
L 6 HOH A 79 679 486 HOH HOH . 
L 6 HOH A 80 680 478 HOH HOH . 
L 6 HOH A 81 681 31 HOH HOH . 
L 6 HOH A 82 682 118 HOH HOH . 
L 6 HOH A 83 683 500 HOH HOH . 
L 6 HOH A 84 684 368 HOH HOH . 
L 6 HOH A 85 685 426 HOH HOH . 
L 6 HOH A 86 686 65 HOH HOH . 
L 6 HOH A 87 687 4 HOH HOH . 
L 6 HOH A 88 688 60 HOH HOH . 
L 6 HOH A 89 689 427 HOH HOH . 
L 6 HOH A 90 690 157 HOH HOH . 
L 6 HOH A 91 691 32 HOH HOH . 
L 6 HOH A 92 692 36 HOH HOH . 
L 6 HOH A 93 693 131 HOH HOH . 
L 6 HOH A 94 694 5 HOH HOH . 
L 6 HOH A 95 695 132 HOH HOH . 
L 6 HOH A 96 696 49 HOH HOH . 
L 6 HOH A 97 697 497 HOH HOH . 
L 6 HOH A 98 698 479 HOH HOH . 
L 6 HOH A 99 699 455 HOH HOH . 
L 6 HOH A 100 700 19 HOH HOH . 
L 6 HOH A 101 701 185 HOH HOH . 
L 6 HOH A 102 702 505 HOH HOH . 
L 6 HOH A 103 703 37 HOH HOH . 
L 6 HOH A 104 704 151 HOH HOH . 
L 6 HOH A 105 705 173 HOH HOH . 
L 6 HOH A 106 706 419 HOH HOH . 
L 6 HOH A 107 707 40 HOH HOH . 
L 6 HOH A 108 708 502 HOH HOH . 
L 6 HOH A 109 709 69 HOH HOH . 
L 6 HOH A 110 710 489 HOH HOH . 
L 6 HOH A 111 711 436 HOH HOH . 
L 6 HOH A 112 712 25 HOH HOH . 
L 6 HOH A 113 713 128 HOH HOH . 
L 6 HOH A 114 714 93 HOH HOH . 
L 6 HOH A 115 715 425 HOH HOH . 
L 6 HOH A 116 716 11 HOH HOH . 
L 6 HOH A 117 717 59 HOH HOH . 
L 6 HOH A 118 718 7 HOH HOH . 
L 6 HOH A 119 719 122 HOH HOH . 
L 6 HOH A 120 720 450 HOH HOH . 
L 6 HOH A 121 721 67 HOH HOH . 
L 6 HOH A 122 722 13 HOH HOH . 
L 6 HOH A 123 723 138 HOH HOH . 
L 6 HOH A 124 724 107 HOH HOH . 
L 6 HOH A 125 725 82 HOH HOH . 
L 6 HOH A 126 726 12 HOH HOH . 
L 6 HOH A 127 727 199 HOH HOH . 
L 6 HOH A 128 728 445 HOH HOH . 
L 6 HOH A 129 729 100 HOH HOH . 
L 6 HOH A 130 730 178 HOH HOH . 
L 6 HOH A 131 731 484 HOH HOH . 
L 6 HOH A 132 732 453 HOH HOH . 
L 6 HOH A 133 733 171 HOH HOH . 
L 6 HOH A 134 734 39 HOH HOH . 
L 6 HOH A 135 735 109 HOH HOH . 
L 6 HOH A 136 736 38 HOH HOH . 
L 6 HOH A 137 737 124 HOH HOH . 
L 6 HOH A 138 738 27 HOH HOH . 
L 6 HOH A 139 739 143 HOH HOH . 
L 6 HOH A 140 740 231 HOH HOH . 
L 6 HOH A 141 741 403 HOH HOH . 
L 6 HOH A 142 742 120 HOH HOH . 
L 6 HOH A 143 743 166 HOH HOH . 
L 6 HOH A 144 744 248 HOH HOH . 
L 6 HOH A 145 745 57 HOH HOH . 
L 6 HOH A 146 746 79 HOH HOH . 
L 6 HOH A 147 747 144 HOH HOH . 
L 6 HOH A 148 748 130 HOH HOH . 
L 6 HOH A 149 749 45 HOH HOH . 
L 6 HOH A 150 750 225 HOH HOH . 
L 6 HOH A 151 751 473 HOH HOH . 
L 6 HOH A 152 752 55 HOH HOH . 
L 6 HOH A 153 753 204 HOH HOH . 
L 6 HOH A 154 754 75 HOH HOH . 
L 6 HOH A 155 755 26 HOH HOH . 
L 6 HOH A 156 756 440 HOH HOH . 
L 6 HOH A 157 757 87 HOH HOH . 
L 6 HOH A 158 758 121 HOH HOH . 
L 6 HOH A 159 759 257 HOH HOH . 
L 6 HOH A 160 760 9 HOH HOH . 
L 6 HOH A 161 761 476 HOH HOH . 
L 6 HOH A 162 762 313 HOH HOH . 
L 6 HOH A 163 763 44 HOH HOH . 
L 6 HOH A 164 764 81 HOH HOH . 
L 6 HOH A 165 765 48 HOH HOH . 
L 6 HOH A 166 766 101 HOH HOH . 
L 6 HOH A 167 767 492 HOH HOH . 
L 6 HOH A 168 768 469 HOH HOH . 
L 6 HOH A 169 769 429 HOH HOH . 
L 6 HOH A 170 770 435 HOH HOH . 
L 6 HOH A 171 771 408 HOH HOH . 
L 6 HOH A 172 772 240 HOH HOH . 
L 6 HOH A 173 773 161 HOH HOH . 
L 6 HOH A 174 774 472 HOH HOH . 
L 6 HOH A 175 775 498 HOH HOH . 
L 6 HOH A 176 776 103 HOH HOH . 
L 6 HOH A 177 777 30 HOH HOH . 
L 6 HOH A 178 778 401 HOH HOH . 
L 6 HOH A 179 779 58 HOH HOH . 
L 6 HOH A 180 780 442 HOH HOH . 
L 6 HOH A 181 781 127 HOH HOH . 
L 6 HOH A 182 782 63 HOH HOH . 
L 6 HOH A 183 783 214 HOH HOH . 
L 6 HOH A 184 784 495 HOH HOH . 
L 6 HOH A 185 785 16 HOH HOH . 
L 6 HOH A 186 786 504 HOH HOH . 
L 6 HOH A 187 787 163 HOH HOH . 
L 6 HOH A 188 788 80 HOH HOH . 
L 6 HOH A 189 789 108 HOH HOH . 
L 6 HOH A 190 790 212 HOH HOH . 
L 6 HOH A 191 791 457 HOH HOH . 
L 6 HOH A 192 792 76 HOH HOH . 
L 6 HOH A 193 793 463 HOH HOH . 
L 6 HOH A 194 794 10 HOH HOH . 
L 6 HOH A 195 795 474 HOH HOH . 
L 6 HOH A 196 796 452 HOH HOH . 
L 6 HOH A 197 797 470 HOH HOH . 
L 6 HOH A 198 798 417 HOH HOH . 
L 6 HOH A 199 799 141 HOH HOH . 
L 6 HOH A 200 800 360 HOH HOH . 
L 6 HOH A 201 801 357 HOH HOH . 
L 6 HOH A 202 802 136 HOH HOH . 
L 6 HOH A 203 803 415 HOH HOH . 
L 6 HOH A 204 804 287 HOH HOH . 
L 6 HOH A 205 805 437 HOH HOH . 
L 6 HOH A 206 806 411 HOH HOH . 
L 6 HOH A 207 807 433 HOH HOH . 
L 6 HOH A 208 808 382 HOH HOH . 
L 6 HOH A 209 809 444 HOH HOH . 
L 6 HOH A 210 810 416 HOH HOH . 
L 6 HOH A 211 811 503 HOH HOH . 
L 6 HOH A 212 812 316 HOH HOH . 
L 6 HOH A 213 813 97 HOH HOH . 
L 6 HOH A 214 814 351 HOH HOH . 
L 6 HOH A 215 815 499 HOH HOH . 
L 6 HOH A 216 816 182 HOH HOH . 
L 6 HOH A 217 817 362 HOH HOH . 
L 6 HOH A 218 818 189 HOH HOH . 
L 6 HOH A 219 819 404 HOH HOH . 
L 6 HOH A 220 820 211 HOH HOH . 
L 6 HOH A 221 821 464 HOH HOH . 
L 6 HOH A 222 822 364 HOH HOH . 
L 6 HOH A 223 823 405 HOH HOH . 
L 6 HOH A 224 824 358 HOH HOH . 
L 6 HOH A 225 825 501 HOH HOH . 
L 6 HOH A 226 826 491 HOH HOH . 
L 6 HOH A 227 827 443 HOH HOH . 
L 6 HOH A 228 828 363 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . F 2 26.086 -19.489 27.452 1 76.01 ? S DMS 505 A 1 
HETATM 2 O O DMS . . . F 2 24.958 -18.689 28.04 1 72.75 ? O DMS 505 A 1 
HETATM 3 C C1 DMS . . . F 2 26.85 -20.359 28.813 1 71.45 ? C1 DMS 505 A 1 
HETATM 4 C C2 DMS . . . F 2 27.358 -18.296 27.102 1 73.84 ? C2 DMS 505 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#