data_8F58
#
_model_server_result.job_id            PXy0ZrYLMM3AHY6txvydRg 
_model_server_result.datetime_utc      '2024-10-15 05:15:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f58 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    8F58 
#
_exptl.entry_id    8F58 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8F58 
_cell.length_a            175.401 
_cell.length_b            175.401 
_cell.length_c            123.517 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F58 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 123.517 
5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 123.517 
6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 123.517 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     8F58 
_atom_sites.fract_transf_matrix[1][1]    0.005701 
_atom_sites.fract_transf_matrix[1][2]    0.003292 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006583 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008096 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 501 503 DMS DMS . 
C 2 DMS A 1 502 504 DMS DMS . 
D 2 DMS A 1 503 505 DMS DMS . 
E 3 GOL A 1 504 506 GOL GOL . 
F 4 XEH A 1 505 508 XEH 272 . 
G 3 GOL A 1 506 14 GOL GOL . 
H 3 GOL A 1 507 15 GOL GOL . 
I 5 PEG A 1 508 17 PEG PEG . 
J 6 HOH A 1 601 62 HOH HOH . 
J 6 HOH A 2 602 414 HOH HOH . 
J 6 HOH A 3 603 418 HOH HOH . 
J 6 HOH A 4 604 477 HOH HOH . 
J 6 HOH A 5 605 114 HOH HOH . 
J 6 HOH A 6 606 53 HOH HOH . 
J 6 HOH A 7 607 6 HOH HOH . 
J 6 HOH A 8 608 468 HOH HOH . 
J 6 HOH A 9 609 102 HOH HOH . 
J 6 HOH A 10 610 422 HOH HOH . 
J 6 HOH A 11 611 479 HOH HOH . 
J 6 HOH A 12 612 52 HOH HOH . 
J 6 HOH A 13 613 117 HOH HOH . 
J 6 HOH A 14 614 423 HOH HOH . 
J 6 HOH A 15 615 111 HOH HOH . 
J 6 HOH A 16 616 408 HOH HOH . 
J 6 HOH A 17 617 56 HOH HOH . 
J 6 HOH A 18 618 129 HOH HOH . 
J 6 HOH A 19 619 140 HOH HOH . 
J 6 HOH A 20 620 159 HOH HOH . 
J 6 HOH A 21 621 496 HOH HOH . 
J 6 HOH A 22 622 148 HOH HOH . 
J 6 HOH A 23 623 33 HOH HOH . 
J 6 HOH A 24 624 86 HOH HOH . 
J 6 HOH A 25 625 432 HOH HOH . 
J 6 HOH A 26 626 421 HOH HOH . 
J 6 HOH A 27 627 490 HOH HOH . 
J 6 HOH A 28 628 42 HOH HOH . 
J 6 HOH A 29 629 110 HOH HOH . 
J 6 HOH A 30 630 34 HOH HOH . 
J 6 HOH A 31 631 84 HOH HOH . 
J 6 HOH A 32 632 483 HOH HOH . 
J 6 HOH A 33 633 68 HOH HOH . 
J 6 HOH A 34 634 134 HOH HOH . 
J 6 HOH A 35 635 14 HOH HOH . 
J 6 HOH A 36 636 439 HOH HOH . 
J 6 HOH A 37 637 424 HOH HOH . 
J 6 HOH A 38 638 257 HOH HOH . 
J 6 HOH A 39 639 427 HOH HOH . 
J 6 HOH A 40 640 113 HOH HOH . 
J 6 HOH A 41 641 35 HOH HOH . 
J 6 HOH A 42 642 8 HOH HOH . 
J 6 HOH A 43 643 17 HOH HOH . 
J 6 HOH A 44 644 104 HOH HOH . 
J 6 HOH A 45 645 270 HOH HOH . 
J 6 HOH A 46 646 20 HOH HOH . 
J 6 HOH A 47 647 18 HOH HOH . 
J 6 HOH A 48 648 366 HOH HOH . 
J 6 HOH A 49 649 65 HOH HOH . 
J 6 HOH A 50 650 41 HOH HOH . 
J 6 HOH A 51 651 429 HOH HOH . 
J 6 HOH A 52 652 47 HOH HOH . 
J 6 HOH A 53 653 471 HOH HOH . 
J 6 HOH A 54 654 24 HOH HOH . 
J 6 HOH A 55 655 165 HOH HOH . 
J 6 HOH A 56 656 31 HOH HOH . 
J 6 HOH A 57 657 72 HOH HOH . 
J 6 HOH A 58 658 1 HOH HOH . 
J 6 HOH A 59 659 71 HOH HOH . 
J 6 HOH A 60 660 126 HOH HOH . 
J 6 HOH A 61 661 88 HOH HOH . 
J 6 HOH A 62 662 482 HOH HOH . 
J 6 HOH A 63 663 425 HOH HOH . 
J 6 HOH A 64 664 132 HOH HOH . 
J 6 HOH A 65 665 106 HOH HOH . 
J 6 HOH A 66 666 410 HOH HOH . 
J 6 HOH A 67 667 19 HOH HOH . 
J 6 HOH A 68 668 29 HOH HOH . 
J 6 HOH A 69 669 152 HOH HOH . 
J 6 HOH A 70 670 150 HOH HOH . 
J 6 HOH A 71 671 51 HOH HOH . 
J 6 HOH A 72 672 66 HOH HOH . 
J 6 HOH A 73 673 449 HOH HOH . 
J 6 HOH A 74 674 131 HOH HOH . 
J 6 HOH A 75 675 59 HOH HOH . 
J 6 HOH A 76 676 90 HOH HOH . 
J 6 HOH A 77 677 49 HOH HOH . 
J 6 HOH A 78 678 199 HOH HOH . 
J 6 HOH A 79 679 99 HOH HOH . 
J 6 HOH A 80 680 73 HOH HOH . 
J 6 HOH A 81 681 209 HOH HOH . 
J 6 HOH A 82 682 214 HOH HOH . 
J 6 HOH A 83 683 46 HOH HOH . 
J 6 HOH A 84 684 426 HOH HOH . 
J 6 HOH A 85 685 15 HOH HOH . 
J 6 HOH A 86 686 438 HOH HOH . 
J 6 HOH A 87 687 409 HOH HOH . 
J 6 HOH A 88 688 69 HOH HOH . 
J 6 HOH A 89 689 22 HOH HOH . 
J 6 HOH A 90 690 122 HOH HOH . 
J 6 HOH A 91 691 89 HOH HOH . 
J 6 HOH A 92 692 119 HOH HOH . 
J 6 HOH A 93 693 151 HOH HOH . 
J 6 HOH A 94 694 37 HOH HOH . 
J 6 HOH A 95 695 183 HOH HOH . 
J 6 HOH A 96 696 244 HOH HOH . 
J 6 HOH A 97 697 4 HOH HOH . 
J 6 HOH A 98 698 3 HOH HOH . 
J 6 HOH A 99 699 75 HOH HOH . 
J 6 HOH A 100 700 157 HOH HOH . 
J 6 HOH A 101 701 155 HOH HOH . 
J 6 HOH A 102 702 118 HOH HOH . 
J 6 HOH A 103 703 128 HOH HOH . 
J 6 HOH A 104 704 420 HOH HOH . 
J 6 HOH A 105 705 115 HOH HOH . 
J 6 HOH A 106 706 93 HOH HOH . 
J 6 HOH A 107 707 120 HOH HOH . 
J 6 HOH A 108 708 478 HOH HOH . 
J 6 HOH A 109 709 39 HOH HOH . 
J 6 HOH A 110 710 473 HOH HOH . 
J 6 HOH A 111 711 82 HOH HOH . 
J 6 HOH A 112 712 138 HOH HOH . 
J 6 HOH A 113 713 465 HOH HOH . 
J 6 HOH A 114 714 121 HOH HOH . 
J 6 HOH A 115 715 60 HOH HOH . 
J 6 HOH A 116 716 450 HOH HOH . 
J 6 HOH A 117 717 403 HOH HOH . 
J 6 HOH A 118 718 486 HOH HOH . 
J 6 HOH A 119 719 95 HOH HOH . 
J 6 HOH A 120 720 466 HOH HOH . 
J 6 HOH A 121 721 419 HOH HOH . 
J 6 HOH A 122 722 36 HOH HOH . 
J 6 HOH A 123 723 143 HOH HOH . 
J 6 HOH A 124 724 40 HOH HOH . 
J 6 HOH A 125 725 32 HOH HOH . 
J 6 HOH A 126 726 38 HOH HOH . 
J 6 HOH A 127 727 124 HOH HOH . 
J 6 HOH A 128 728 476 HOH HOH . 
J 6 HOH A 129 729 25 HOH HOH . 
J 6 HOH A 130 730 445 HOH HOH . 
J 6 HOH A 131 731 12 HOH HOH . 
J 6 HOH A 132 732 170 HOH HOH . 
J 6 HOH A 133 733 499 HOH HOH . 
J 6 HOH A 134 734 105 HOH HOH . 
J 6 HOH A 135 735 191 HOH HOH . 
J 6 HOH A 136 736 166 HOH HOH . 
J 6 HOH A 137 737 204 HOH HOH . 
J 6 HOH A 138 738 103 HOH HOH . 
J 6 HOH A 139 739 440 HOH HOH . 
J 6 HOH A 140 740 475 HOH HOH . 
J 6 HOH A 141 741 45 HOH HOH . 
J 6 HOH A 142 742 5 HOH HOH . 
J 6 HOH A 143 743 368 HOH HOH . 
J 6 HOH A 144 744 185 HOH HOH . 
J 6 HOH A 145 745 11 HOH HOH . 
J 6 HOH A 146 746 57 HOH HOH . 
J 6 HOH A 147 747 436 HOH HOH . 
J 6 HOH A 148 748 13 HOH HOH . 
J 6 HOH A 149 749 109 HOH HOH . 
J 6 HOH A 150 750 67 HOH HOH . 
J 6 HOH A 151 751 79 HOH HOH . 
J 6 HOH A 152 752 7 HOH HOH . 
J 6 HOH A 153 753 81 HOH HOH . 
J 6 HOH A 154 754 231 HOH HOH . 
J 6 HOH A 155 755 225 HOH HOH . 
J 6 HOH A 156 756 87 HOH HOH . 
J 6 HOH A 157 757 173 HOH HOH . 
J 6 HOH A 158 758 100 HOH HOH . 
J 6 HOH A 159 759 80 HOH HOH . 
J 6 HOH A 160 760 402 HOH HOH . 
J 6 HOH A 161 761 484 HOH HOH . 
J 6 HOH A 162 762 455 HOH HOH . 
J 6 HOH A 163 763 472 HOH HOH . 
J 6 HOH A 164 764 453 HOH HOH . 
J 6 HOH A 165 765 130 HOH HOH . 
J 6 HOH A 166 766 178 HOH HOH . 
J 6 HOH A 167 767 184 HOH HOH . 
J 6 HOH A 168 768 123 HOH HOH . 
J 6 HOH A 169 769 489 HOH HOH . 
J 6 HOH A 170 770 495 HOH HOH . 
J 6 HOH A 171 771 497 HOH HOH . 
J 6 HOH A 172 772 498 HOH HOH . 
J 6 HOH A 173 773 58 HOH HOH . 
J 6 HOH A 174 774 27 HOH HOH . 
J 6 HOH A 175 775 10 HOH HOH . 
J 6 HOH A 176 776 141 HOH HOH . 
J 6 HOH A 177 777 144 HOH HOH . 
J 6 HOH A 178 778 485 HOH HOH . 
J 6 HOH A 179 779 442 HOH HOH . 
J 6 HOH A 180 780 44 HOH HOH . 
J 6 HOH A 181 781 23 HOH HOH . 
J 6 HOH A 182 782 55 HOH HOH . 
J 6 HOH A 183 783 488 HOH HOH . 
J 6 HOH A 184 784 240 HOH HOH . 
J 6 HOH A 185 785 480 HOH HOH . 
J 6 HOH A 186 786 469 HOH HOH . 
J 6 HOH A 187 787 492 HOH HOH . 
J 6 HOH A 188 788 127 HOH HOH . 
J 6 HOH A 189 789 107 HOH HOH . 
J 6 HOH A 190 790 161 HOH HOH . 
J 6 HOH A 191 791 401 HOH HOH . 
J 6 HOH A 192 792 212 HOH HOH . 
J 6 HOH A 193 793 158 HOH HOH . 
J 6 HOH A 194 794 48 HOH HOH . 
J 6 HOH A 195 795 30 HOH HOH . 
J 6 HOH A 196 796 247 HOH HOH . 
J 6 HOH A 197 797 108 HOH HOH . 
J 6 HOH A 198 798 169 HOH HOH . 
J 6 HOH A 199 799 433 HOH HOH . 
J 6 HOH A 200 800 163 HOH HOH . 
J 6 HOH A 201 801 26 HOH HOH . 
J 6 HOH A 202 802 101 HOH HOH . 
J 6 HOH A 203 803 415 HOH HOH . 
J 6 HOH A 204 804 63 HOH HOH . 
J 6 HOH A 205 805 286 HOH HOH . 
J 6 HOH A 206 806 463 HOH HOH . 
J 6 HOH A 207 807 76 HOH HOH . 
J 6 HOH A 208 808 474 HOH HOH . 
J 6 HOH A 209 809 417 HOH HOH . 
J 6 HOH A 210 810 435 HOH HOH . 
J 6 HOH A 211 811 16 HOH HOH . 
J 6 HOH A 212 812 201 HOH HOH . 
J 6 HOH A 213 813 431 HOH HOH . 
J 6 HOH A 214 814 457 HOH HOH . 
J 6 HOH A 215 815 452 HOH HOH . 
J 6 HOH A 216 816 357 HOH HOH . 
J 6 HOH A 217 817 470 HOH HOH . 
J 6 HOH A 218 818 97 HOH HOH . 
J 6 HOH A 219 819 136 HOH HOH . 
J 6 HOH A 220 820 411 HOH HOH . 
J 6 HOH A 221 821 444 HOH HOH . 
J 6 HOH A 222 822 416 HOH HOH . 
J 6 HOH A 223 823 360 HOH HOH . 
J 6 HOH A 224 824 362 HOH HOH . 
J 6 HOH A 225 825 382 HOH HOH . 
J 6 HOH A 226 826 404 HOH HOH . 
J 6 HOH A 227 827 390 HOH HOH . 
J 6 HOH A 228 828 487 HOH HOH . 
J 6 HOH A 229 829 211 HOH HOH . 
J 6 HOH A 230 830 491 HOH HOH . 
J 6 HOH A 231 831 189 HOH HOH . 
J 6 HOH A 232 832 405 HOH HOH . 
J 6 HOH A 233 833 361 HOH HOH . 
J 6 HOH A 234 834 481 HOH HOH . 
J 6 HOH A 235 835 364 HOH HOH . 
J 6 HOH A 236 836 443 HOH HOH . 
J 6 HOH A 237 837 376 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . B 2 15.64 -1.059 52.741 1 101.77 ? S DMS 501 A 1 
HETATM 2 O O DMS . . . B 2 15.545 -2.479 52.263 1 90.81 ? O DMS 501 A 1 
HETATM 3 C C1 DMS . . . B 2 14.499 -0.917 54.097 1 100.81 ? C1 DMS 501 A 1 
HETATM 4 C C2 DMS . . . B 2 14.753 -0.078 51.554 1 97.86 ? C2 DMS 501 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           387 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#