data_8F5J # _model_server_result.job_id mpv2uhSrFRC_Z9_LU5HezA _model_server_result.datetime_utc '2024-12-26 13:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8f5j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 8F5J # _exptl.entry_id 8F5J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 236.671 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-chloro-5-fluorothieno[3,2-b]thiophene-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8F5J _cell.length_a 132.27 _cell.length_b 132.27 _cell.length_c 121.7 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8F5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 66.135 -114.54918 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 249 A ASN 249 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc2 A O VAL 298 A VAL 298 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc3 A O ASP 300 A ASP 300 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc4 A O PHE 303 A PHE 303 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc5 A O GLY 337 A GLY 337 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? metalc ? metalc6 B O1B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc7 B O1A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc8 B O2A ADP . A ADP 401 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? # _chem_comp.formula 'C7 H2 Cl F O2 S2' _chem_comp.formula_weight 236.671 _chem_comp.id XER _chem_comp.mon_nstd_flag . _chem_comp.name '3-chloro-5-fluorothieno[3,2-b]thiophene-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S6 C2 XER sing 420 n y S6 C5 XER sing 421 n y O8 C7 XER doub 422 n n C1 C2 XER sing 423 n y C1 C11 XER doub 424 n y C2 C3 XER doub 425 n y C7 C5 XER sing 426 n n C7 O9 XER sing 427 n n C5 C4 XER doub 428 n y C11 F12 XER sing 429 n n C11 S10 XER sing 430 n y C3 C4 XER sing 431 n y C3 S10 XER sing 432 n y C4 CL XER sing 433 n n C1 HC1 XER sing 434 n n O9 H1 XER sing 435 n n # _atom_sites.entry_id 8F5J _atom_sites.fract_transf_matrix[1][1] 0.00756 _atom_sites.fract_transf_matrix[1][2] 0.004365 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008217 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 401 ADP ADP . C 3 MG A 1 402 402 MG MG . D 4 K A 1 403 403 K K . E 5 XER A 1 404 501 XER PFE . F 6 HOH A 1 501 2 HOH HOH . F 6 HOH A 2 502 17 HOH HOH . F 6 HOH A 3 503 9 HOH HOH . F 6 HOH A 4 504 16 HOH HOH . F 6 HOH A 5 505 1 HOH HOH . F 6 HOH A 6 506 4 HOH HOH . F 6 HOH A 7 507 23 HOH HOH . F 6 HOH A 8 508 13 HOH HOH . F 6 HOH A 9 509 20 HOH HOH . F 6 HOH A 10 510 24 HOH HOH . F 6 HOH A 11 511 18 HOH HOH . F 6 HOH A 12 512 27 HOH HOH . F 6 HOH A 13 513 8 HOH HOH . F 6 HOH A 14 514 10 HOH HOH . F 6 HOH A 15 515 19 HOH HOH . F 6 HOH A 16 516 26 HOH HOH . F 6 HOH A 17 517 25 HOH HOH . F 6 HOH A 18 518 7 HOH HOH . F 6 HOH A 19 519 12 HOH HOH . F 6 HOH A 20 520 22 HOH HOH . F 6 HOH A 21 521 6 HOH HOH . F 6 HOH A 22 522 3 HOH HOH . F 6 HOH A 23 523 14 HOH HOH . F 6 HOH A 24 524 11 HOH HOH . F 6 HOH A 25 525 28 HOH HOH . F 6 HOH A 26 526 5 HOH HOH . F 6 HOH A 27 527 21 HOH HOH . F 6 HOH A 28 528 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 XER . . . E 5 4.529 -39.587 24.468 1 82.88 ? C4 XER 404 A 1 HETATM 2 C C7 XER . . . E 5 6.73 -39.233 23.101 1 81.24 ? C7 XER 404 A 1 HETATM 3 C C1 XER . . . E 5 1.565 -40.486 22.604 1 82.35 ? C1 XER 404 A 1 HETATM 4 C C2 XER . . . E 5 2.913 -40.108 22.894 1 82.22 ? C2 XER 404 A 1 HETATM 5 C C3 XER . . . E 5 3.168 -39.935 24.243 1 82.47 ? C3 XER 404 A 1 HETATM 6 C C5 XER . . . E 5 5.281 -39.501 23.334 1 81.89 ? C5 XER 404 A 1 HETATM 7 S S6 XER . . . E 5 4.326 -39.843 21.921 1 81.58 ? S6 XER 404 A 1 HETATM 8 O O8 XER . . . E 5 7.199 -39.311 21.979 1 81.09 ? O8 XER 404 A 1 HETATM 9 O O9 XER . . . E 5 7.456 -38.934 24.137 1 80.82 ? O9 XER 404 A 1 HETATM 10 CL CL XER . . . E 5 5.063 -39.365 26.096 1 84.41 ? CL XER 404 A 1 HETATM 11 S S10 XER . . . E 5 1.753 -40.239 25.203 1 82.26 ? S10 XER 404 A 1 HETATM 12 C C11 XER . . . E 5 0.88 -40.588 23.739 1 82.65 ? C11 XER 404 A 1 HETATM 13 F F12 XER . . . E 5 -0.407 -40.949 23.864 1 83.42 ? F12 XER 404 A 1 HETATM 14 H HC1 XER . . . E 5 1.176 -40.649 21.6 0 68.33 ? HC1 XER 404 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 14 #