data_8F7A
#
_model_server_result.job_id            '_XczQ3gymFH6sQfhxiUPpw' 
_model_server_result.datetime_utc      '2024-10-11 00:30:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f7a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    8F7A 
#
_exptl.entry_id    8F7A 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8F7A 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F7A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C MG MG . B MG 301 1_555 D O2A GTP . B GTP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc2 C MG MG . B MG 301 1_555 D O3G GTP . B GTP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 129 n n 
PG O2G GTP sing 130 n n 
PG O3G GTP sing 131 n n 
PG O3B GTP sing 132 n n 
O2G HOG2 GTP sing 133 n n 
O3G HOG3 GTP sing 134 n n 
O3B PB GTP sing 135 n n 
PB O1B GTP doub 136 n n 
PB O2B GTP sing 137 n n 
PB O3A GTP sing 138 n n 
O2B HOB2 GTP sing 139 n n 
O3A PA GTP sing 140 n n 
PA O1A GTP doub 141 n n 
PA O2A GTP sing 142 n n 
PA O5' GTP sing 143 n n 
O2A HOA2 GTP sing 144 n n 
O5' C5' GTP sing 145 n n 
C5' C4' GTP sing 146 n n 
C5' H5' GTP sing 147 n n 
C5' "H5''" GTP sing 148 n n 
C4' O4' GTP sing 149 n n 
C4' C3' GTP sing 150 n n 
C4' H4' GTP sing 151 n n 
O4' C1' GTP sing 152 n n 
C3' O3' GTP sing 153 n n 
C3' C2' GTP sing 154 n n 
C3' H3' GTP sing 155 n n 
O3' HO3' GTP sing 156 n n 
C2' O2' GTP sing 157 n n 
C2' C1' GTP sing 158 n n 
C2' H2' GTP sing 159 n n 
O2' HO2' GTP sing 160 n n 
C1' N9 GTP sing 161 n n 
C1' H1' GTP sing 162 n n 
N9 C8 GTP sing 163 n y 
N9 C4 GTP sing 164 n y 
C8 N7 GTP doub 165 n y 
C8 H8 GTP sing 166 n n 
N7 C5 GTP sing 167 n y 
C5 C6 GTP sing 168 n n 
C5 C4 GTP doub 169 n y 
C6 O6 GTP doub 170 n n 
C6 N1 GTP sing 171 n n 
N1 C2 GTP sing 172 n n 
N1 HN1 GTP sing 173 n n 
C2 N2 GTP sing 174 n n 
C2 N3 GTP doub 175 n n 
N2 HN21 GTP sing 176 n n 
N2 HN22 GTP sing 177 n n 
N3 C4 GTP sing 178 n n 
#
_atom_sites.entry_id                     8F7A 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG B 1 301 203 MG MG . 
D 4 GTP B 1 302 204 GTP GTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . D 4 117.879 143.005 131.39 1 101.27 ? PG GTP 302 B 1 
HETATM 2 O O1G GTP . . . D 4 119.048 142.562 132.228 1 101.27 ? O1G GTP 302 B 1 
HETATM 3 O O2G GTP . . . D 4 117.627 144.468 131.618 1 101.27 ? O2G GTP 302 B 1 
HETATM 4 O O3G GTP . . . D 4 116.636 142.23 131.739 1 101.27 ? O3G GTP 302 B 1 
HETATM 5 O O3B GTP . . . D 4 118.258 142.796 129.851 1 101.27 ? O3B GTP 302 B 1 
HETATM 6 P PB GTP . . . D 4 118.865 141.415 129.318 1 101.27 ? PB GTP 302 B 1 
HETATM 7 O O1B GTP . . . D 4 119.7 141.687 128.098 1 101.27 ? O1B GTP 302 B 1 
HETATM 8 O O2B GTP . . . D 4 119.674 140.752 130.397 1 101.27 ? O2B GTP 302 B 1 
HETATM 9 O O3A GTP . . . D 4 117.584 140.546 128.89 1 101.27 ? O3A GTP 302 B 1 
HETATM 10 P PA GTP . . . D 4 116.576 141.139 127.789 1 101.27 ? PA GTP 302 B 1 
HETATM 11 O O1A GTP . . . D 4 115.438 140.179 127.555 1 101.27 ? O1A GTP 302 B 1 
HETATM 12 O O2A GTP . . . D 4 116.071 142.493 128.205 1 101.27 ? O2A GTP 302 B 1 
HETATM 13 O O5' GTP . . . D 4 117.452 141.263 126.45 1 101.27 ? O5' GTP 302 B 1 
HETATM 14 C C5' GTP . . . D 4 117.015 140.664 125.254 1 101.27 ? C5' GTP 302 B 1 
HETATM 15 C C4' GTP . . . D 4 117.931 139.506 124.917 1 101.27 ? C4' GTP 302 B 1 
HETATM 16 O O4' GTP . . . D 4 117.203 138.335 124.628 1 101.27 ? O4' GTP 302 B 1 
HETATM 17 C C3' GTP . . . D 4 118.777 139.748 123.681 1 101.27 ? C3' GTP 302 B 1 
HETATM 18 O O3' GTP . . . D 4 120.034 140.255 124.053 1 101.27 ? O3' GTP 302 B 1 
HETATM 19 C C2' GTP . . . D 4 118.958 138.368 123.097 1 101.27 ? C2' GTP 302 B 1 
HETATM 20 O O2' GTP . . . D 4 120.318 138.021 123.152 1 101.27 ? O2' GTP 302 B 1 
HETATM 21 C C1' GTP . . . D 4 118.156 137.479 124.037 1 101.27 ? C1' GTP 302 B 1 
HETATM 22 N N9 GTP . . . D 4 117.579 136.238 123.467 1 101.27 ? N9 GTP 302 B 1 
HETATM 23 C C8 GTP . . . D 4 116.795 135.393 124.201 1 101.27 ? C8 GTP 302 B 1 
HETATM 24 N N7 GTP . . . D 4 116.443 134.335 123.448 1 101.27 ? N7 GTP 302 B 1 
HETATM 25 C C5 GTP . . . D 4 117.006 134.478 122.238 1 101.27 ? C5 GTP 302 B 1 
HETATM 26 C C6 GTP . . . D 4 116.958 133.674 121.117 1 101.27 ? C6 GTP 302 B 1 
HETATM 27 O O6 GTP . . . D 4 116.31 132.634 121.145 1 101.27 ? O6 GTP 302 B 1 
HETATM 28 N N1 GTP . . . D 4 117.633 134.043 119.978 1 101.27 ? N1 GTP 302 B 1 
HETATM 29 C C2 GTP . . . D 4 118.354 135.215 119.971 1 101.27 ? C2 GTP 302 B 1 
HETATM 30 N N2 GTP . . . D 4 119.01 135.578 118.873 1 101.27 ? N2 GTP 302 B 1 
HETATM 31 N N3 GTP . . . D 4 118.398 136.011 121.099 1 101.27 ? N3 GTP 302 B 1 
HETATM 32 C C4 GTP . . . D 4 117.737 135.656 122.228 1 101.27 ? C4 GTP 302 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           32 
#