data_8F7O # _model_server_result.job_id CE4qSIZZIrHBbqxhlM88KA _model_server_result.datetime_utc '2025-02-05 06:39:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8f7o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 8F7O # _exptl.entry_id 8F7O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.289 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-amino-5-chloro-N-[(1R)-1-(5-{[5-chloro-4-(trifluoromethyl)pyridin-2-yl]carbamoyl}-1,3-thiazol-2-yl)ethyl]pyrimidine-4-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8F7O _cell.length_a 86.918 _cell.length_b 121.998 _cell.length_c 57.797 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8F7O _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H12 Cl2 F3 N7 O2 S' _chem_comp.formula_weight 506.289 _chem_comp.id QOP _chem_comp.mon_nstd_flag . _chem_comp.name 6-amino-5-chloro-N-[(1R)-1-(5-{[5-chloro-4-(trifluoromethyl)pyridin-2-yl]carbamoyl}-1,3-thiazol-2-yl)ethyl]pyrimidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms tovorafenib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 N17 QOP doub 275 n y C18 C19 QOP sing 276 n y N17 C16 QOP sing 277 n y CL32 C31 QOP sing 278 n n CL20 C19 QOP sing 279 n n O30 C07 QOP doub 280 n n C19 C21 QOP doub 281 n y C16 N15 QOP sing 282 n n C16 C26 QOP doub 283 n y O27 C14 QOP doub 284 n n N15 C14 QOP sing 285 n n C14 C13 QOP sing 286 n n S28 C13 QOP sing 287 n y S28 C10 QOP sing 288 n y F24 C22 QOP sing 289 n n C13 C12 QOP doub 290 n y C21 C26 QOP sing 291 n y C21 C22 QOP sing 292 n n C07 C06 QOP sing 293 n n C07 N08 QOP sing 294 n n C10 C09 QOP sing 295 n n C10 N11 QOP doub 296 n y C09 N08 QOP sing 297 n n C09 C29 QOP sing 298 n n C31 C06 QOP doub 299 n y C31 C02 QOP sing 300 n y C12 N11 QOP sing 301 n y N01 C02 QOP sing 302 n n C06 N05 QOP sing 303 n y C22 F25 QOP sing 304 n n C22 F23 QOP sing 305 n n C02 N03 QOP doub 306 n y N05 C04 QOP doub 307 n y N03 C04 QOP sing 308 n y C18 H1 QOP sing 309 n n C26 H2 QOP sing 310 n n C04 H3 QOP sing 311 n n C09 H4 QOP sing 312 n n C12 H5 QOP sing 313 n n C29 H6 QOP sing 314 n n C29 H7 QOP sing 315 n n C29 H8 QOP sing 316 n n N01 H9 QOP sing 317 n n N01 H10 QOP sing 318 n n N08 H11 QOP sing 319 n n N15 H12 QOP sing 320 n n # _atom_sites.entry_id 8F7O _atom_sites.fract_transf_matrix[1][1] 0.011505 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QOP A 1 801 801 QOP MLN . D 2 QOP B 1 801 801 QOP MLN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 QOP . . . C 2 18.082 35.314 3.151 1 70.87 ? C10 QOP 801 A 1 HETATM 2 C C13 QOP . . . C 2 18.991 35.329 5.431 1 79.02 ? C13 QOP 801 A 1 HETATM 3 C C14 QOP . . . C 2 19.227 35.262 6.94 1 83.68 ? C14 QOP 801 A 1 HETATM 4 C C16 QOP . . . C 2 20.836 35.563 8.882 1 90.82 ? C16 QOP 801 A 1 HETATM 5 C C18 QOP . . . C 2 21.526 36.64 10.804 1 103.33 ? C18 QOP 801 A 1 HETATM 6 C C21 QOP . . . C 2 21.014 34.301 10.914 1 94.9 ? C21 QOP 801 A 1 HETATM 7 C C22 QOP . . . C 2 20.884 32.984 11.684 1 96.35 ? C22 QOP 801 A 1 HETATM 8 C C26 QOP . . . C 2 20.717 34.36 9.559 1 92.41 ? C26 QOP 801 A 1 HETATM 9 C C02 QOP . . . C 2 11.908 31.854 2.023 1 86.69 ? C02 QOP 801 A 1 HETATM 10 C C04 QOP . . . C 2 13.829 30.656 2.369 1 84.66 ? C04 QOP 801 A 1 HETATM 11 C C06 QOP . . . C 2 14.03 32.947 2.191 1 82.94 ? C06 QOP 801 A 1 HETATM 12 C C07 QOP . . . C 2 14.935 34.184 2.186 1 80.56 ? C07 QOP 801 A 1 HETATM 13 C C09 QOP . . . C 2 17.198 35.233 1.906 1 72.22 ? C09 QOP 801 A 1 HETATM 14 C C12 QOP . . . C 2 20.008 35.6 4.479 1 78.75 ? C12 QOP 801 A 1 HETATM 15 C C19 QOP . . . C 2 21.422 35.47 11.54 1 97.83 ? C19 QOP 801 A 1 HETATM 16 C C29 QOP . . . C 2 18.093 35.18 0.673 1 72.54 ? C29 QOP 801 A 1 HETATM 17 C C31 QOP . . . C 2 12.649 33.031 2.009 1 82.44 ? C31 QOP 801 A 1 HETATM 18 F F23 QOP . . . C 2 22.116 32.564 12.096 1 106.39 ? F23 QOP 801 A 1 HETATM 19 F F24 QOP . . . C 2 20.085 33.171 12.774 1 94.72 ? F24 QOP 801 A 1 HETATM 20 F F25 QOP . . . C 2 20.331 32.027 10.879 1 90.35 ? F25 QOP 801 A 1 HETATM 21 N N01 QOP . . . C 2 10.468 31.878 1.844 1 80.99 ? N01 QOP 801 A 1 HETATM 22 N N03 QOP . . . C 2 12.522 30.699 2.203 1 89.16 ? N03 QOP 801 A 1 HETATM 23 N N05 QOP . . . C 2 14.566 31.751 2.359 1 85.11 ? N05 QOP 801 A 1 HETATM 24 N N08 QOP . . . C 2 16.357 34.047 1.915 1 80.32 ? N08 QOP 801 A 1 HETATM 25 N N11 QOP . . . C 2 19.445 35.589 3.122 1 73.18 ? N11 QOP 801 A 1 HETATM 26 N N15 QOP . . . C 2 20.536 35.616 7.462 1 84.61 ? N15 QOP 801 A 1 HETATM 27 N N17 QOP . . . C 2 21.235 36.647 9.517 1 98.77 ? N17 QOP 801 A 1 HETATM 28 O O27 QOP . . . C 2 18.357 34.918 7.668 1 83.25 ? O27 QOP 801 A 1 HETATM 29 O O30 QOP . . . C 2 14.506 35.263 2.415 1 81.18 ? O30 QOP 801 A 1 HETATM 30 S S28 QOP . . . C 2 17.588 35.108 4.688 1 54.97 ? S28 QOP 801 A 1 HETATM 31 CL CL20 QOP . . . C 2 21.82 35.479 13.28 1 108.31 ? CL20 QOP 801 A 1 HETATM 32 CL CL32 QOP . . . C 2 11.826 34.6 1.765 1 115.34 ? CL32 QOP 801 A 1 # _model_server_stats.io_time_ms 110 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #