data_8F82
#
_model_server_result.job_id            H7L7TKjCx3y3yY6Hn4HNAg 
_model_server_result.datetime_utc      '2024-11-15 20:51:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8f82 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    8F82 
#
_exptl.entry_id    8F82 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.48 
_cell.angle_gamma         90 
_cell.entry_id            8F82 
_cell.length_a            28.666 
_cell.length_b            66.739 
_cell.length_c            44.025 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8F82 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 237 n n 
C1 H11 MPD sing 238 n n 
C1 H12 MPD sing 239 n n 
C1 H13 MPD sing 240 n n 
C2 O2 MPD sing 241 n n 
C2 CM MPD sing 242 n n 
C2 C3 MPD sing 243 n n 
O2 HO2 MPD sing 244 n n 
CM HM1 MPD sing 245 n n 
CM HM2 MPD sing 246 n n 
CM HM3 MPD sing 247 n n 
C3 C4 MPD sing 248 n n 
C3 H31 MPD sing 249 n n 
C3 H32 MPD sing 250 n n 
C4 O4 MPD sing 251 n n 
C4 C5 MPD sing 252 n n 
C4 H4 MPD sing 253 n n 
O4 HO4 MPD sing 254 n n 
C5 H51 MPD sing 255 n n 
C5 H52 MPD sing 256 n n 
C5 H53 MPD sing 257 n n 
#
_atom_sites.entry_id                     8F82 
_atom_sites.fract_transf_matrix[1][1]    0.034885 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000292 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014984 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022715 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 XJT A 1 201 202 XJT 845 . 
C 3 MPD A 1 202 203 MPD MPD . 
D 4 NAP A 1 203 201 NAP NAP . 
E 5 BR A 1 204 1 BR BR . 
F 6 HOH A 1 301 143 HOH HOH . 
F 6 HOH A 2 302 170 HOH HOH . 
F 6 HOH A 3 303 174 HOH HOH . 
F 6 HOH A 4 304 142 HOH HOH . 
F 6 HOH A 5 305 129 HOH HOH . 
F 6 HOH A 6 306 28 HOH HOH . 
F 6 HOH A 7 307 52 HOH HOH . 
F 6 HOH A 8 308 88 HOH HOH . 
F 6 HOH A 9 309 14 HOH HOH . 
F 6 HOH A 10 310 182 HOH HOH . 
F 6 HOH A 11 311 145 HOH HOH . 
F 6 HOH A 12 312 92 HOH HOH . 
F 6 HOH A 13 313 148 HOH HOH . 
F 6 HOH A 14 314 120 HOH HOH . 
F 6 HOH A 15 315 90 HOH HOH . 
F 6 HOH A 16 316 187 HOH HOH . 
F 6 HOH A 17 317 42 HOH HOH . 
F 6 HOH A 18 318 114 HOH HOH . 
F 6 HOH A 19 319 131 HOH HOH . 
F 6 HOH A 20 320 123 HOH HOH . 
F 6 HOH A 21 321 20 HOH HOH . 
F 6 HOH A 22 322 51 HOH HOH . 
F 6 HOH A 23 323 65 HOH HOH . 
F 6 HOH A 24 324 95 HOH HOH . 
F 6 HOH A 25 325 127 HOH HOH . 
F 6 HOH A 26 326 94 HOH HOH . 
F 6 HOH A 27 327 144 HOH HOH . 
F 6 HOH A 28 328 71 HOH HOH . 
F 6 HOH A 29 329 116 HOH HOH . 
F 6 HOH A 30 330 130 HOH HOH . 
F 6 HOH A 31 331 60 HOH HOH . 
F 6 HOH A 32 332 93 HOH HOH . 
F 6 HOH A 33 333 151 HOH HOH . 
F 6 HOH A 34 334 63 HOH HOH . 
F 6 HOH A 35 335 81 HOH HOH . 
F 6 HOH A 36 336 154 HOH HOH . 
F 6 HOH A 37 337 17 HOH HOH . 
F 6 HOH A 38 338 73 HOH HOH . 
F 6 HOH A 39 339 7 HOH HOH . 
F 6 HOH A 40 340 4 HOH HOH . 
F 6 HOH A 41 341 69 HOH HOH . 
F 6 HOH A 42 342 91 HOH HOH . 
F 6 HOH A 43 343 32 HOH HOH . 
F 6 HOH A 44 344 68 HOH HOH . 
F 6 HOH A 45 345 54 HOH HOH . 
F 6 HOH A 46 346 89 HOH HOH . 
F 6 HOH A 47 347 78 HOH HOH . 
F 6 HOH A 48 348 53 HOH HOH . 
F 6 HOH A 49 349 10 HOH HOH . 
F 6 HOH A 50 350 117 HOH HOH . 
F 6 HOH A 51 351 25 HOH HOH . 
F 6 HOH A 52 352 6 HOH HOH . 
F 6 HOH A 53 353 195 HOH HOH . 
F 6 HOH A 54 354 105 HOH HOH . 
F 6 HOH A 55 355 19 HOH HOH . 
F 6 HOH A 56 356 157 HOH HOH . 
F 6 HOH A 57 357 160 HOH HOH . 
F 6 HOH A 58 358 43 HOH HOH . 
F 6 HOH A 59 359 172 HOH HOH . 
F 6 HOH A 60 360 183 HOH HOH . 
F 6 HOH A 61 361 9 HOH HOH . 
F 6 HOH A 62 362 159 HOH HOH . 
F 6 HOH A 63 363 141 HOH HOH . 
F 6 HOH A 64 364 137 HOH HOH . 
F 6 HOH A 65 365 165 HOH HOH . 
F 6 HOH A 66 366 49 HOH HOH . 
F 6 HOH A 67 367 33 HOH HOH . 
F 6 HOH A 68 368 133 HOH HOH . 
F 6 HOH A 69 369 135 HOH HOH . 
F 6 HOH A 70 370 50 HOH HOH . 
F 6 HOH A 71 371 169 HOH HOH . 
F 6 HOH A 72 372 138 HOH HOH . 
F 6 HOH A 73 373 189 HOH HOH . 
F 6 HOH A 74 374 75 HOH HOH . 
F 6 HOH A 75 375 36 HOH HOH . 
F 6 HOH A 76 376 115 HOH HOH . 
F 6 HOH A 77 377 8 HOH HOH . 
F 6 HOH A 78 378 184 HOH HOH . 
F 6 HOH A 79 379 16 HOH HOH . 
F 6 HOH A 80 380 82 HOH HOH . 
F 6 HOH A 81 381 121 HOH HOH . 
F 6 HOH A 82 382 31 HOH HOH . 
F 6 HOH A 83 383 125 HOH HOH . 
F 6 HOH A 84 384 139 HOH HOH . 
F 6 HOH A 85 385 30 HOH HOH . 
F 6 HOH A 86 386 83 HOH HOH . 
F 6 HOH A 87 387 61 HOH HOH . 
F 6 HOH A 88 388 26 HOH HOH . 
F 6 HOH A 89 389 56 HOH HOH . 
F 6 HOH A 90 390 85 HOH HOH . 
F 6 HOH A 91 391 13 HOH HOH . 
F 6 HOH A 92 392 59 HOH HOH . 
F 6 HOH A 93 393 62 HOH HOH . 
F 6 HOH A 94 394 35 HOH HOH . 
F 6 HOH A 95 395 38 HOH HOH . 
F 6 HOH A 96 396 196 HOH HOH . 
F 6 HOH A 97 397 45 HOH HOH . 
F 6 HOH A 98 398 18 HOH HOH . 
F 6 HOH A 99 399 118 HOH HOH . 
F 6 HOH A 100 400 11 HOH HOH . 
F 6 HOH A 101 401 97 HOH HOH . 
F 6 HOH A 102 402 158 HOH HOH . 
F 6 HOH A 103 403 21 HOH HOH . 
F 6 HOH A 104 404 41 HOH HOH . 
F 6 HOH A 105 405 109 HOH HOH . 
F 6 HOH A 106 406 103 HOH HOH . 
F 6 HOH A 107 407 39 HOH HOH . 
F 6 HOH A 108 408 167 HOH HOH . 
F 6 HOH A 109 409 58 HOH HOH . 
F 6 HOH A 110 410 86 HOH HOH . 
F 6 HOH A 111 411 173 HOH HOH . 
F 6 HOH A 112 412 48 HOH HOH . 
F 6 HOH A 113 413 2 HOH HOH . 
F 6 HOH A 114 414 186 HOH HOH . 
F 6 HOH A 115 415 15 HOH HOH . 
F 6 HOH A 116 416 156 HOH HOH . 
F 6 HOH A 117 417 24 HOH HOH . 
F 6 HOH A 118 418 150 HOH HOH . 
F 6 HOH A 119 419 176 HOH HOH . 
F 6 HOH A 120 420 101 HOH HOH . 
F 6 HOH A 121 421 3 HOH HOH . 
F 6 HOH A 122 422 124 HOH HOH . 
F 6 HOH A 123 423 84 HOH HOH . 
F 6 HOH A 124 424 46 HOH HOH . 
F 6 HOH A 125 425 153 HOH HOH . 
F 6 HOH A 126 426 140 HOH HOH . 
F 6 HOH A 127 427 29 HOH HOH . 
F 6 HOH A 128 428 192 HOH HOH . 
F 6 HOH A 129 429 102 HOH HOH . 
F 6 HOH A 130 430 178 HOH HOH . 
F 6 HOH A 131 431 64 HOH HOH . 
F 6 HOH A 132 432 1 HOH HOH . 
F 6 HOH A 133 433 79 HOH HOH . 
F 6 HOH A 134 434 23 HOH HOH . 
F 6 HOH A 135 435 5 HOH HOH . 
F 6 HOH A 136 436 110 HOH HOH . 
F 6 HOH A 137 437 100 HOH HOH . 
F 6 HOH A 138 438 126 HOH HOH . 
F 6 HOH A 139 439 55 HOH HOH . 
F 6 HOH A 140 440 128 HOH HOH . 
F 6 HOH A 141 441 22 HOH HOH . 
F 6 HOH A 142 442 188 HOH HOH . 
F 6 HOH A 143 443 74 HOH HOH . 
F 6 HOH A 144 444 44 HOH HOH . 
F 6 HOH A 145 445 104 HOH HOH . 
F 6 HOH A 146 446 134 HOH HOH . 
F 6 HOH A 147 447 34 HOH HOH . 
F 6 HOH A 148 448 152 HOH HOH . 
F 6 HOH A 149 449 76 HOH HOH . 
F 6 HOH A 150 450 66 HOH HOH . 
F 6 HOH A 151 451 179 HOH HOH . 
F 6 HOH A 152 452 147 HOH HOH . 
F 6 HOH A 153 453 132 HOH HOH . 
F 6 HOH A 154 454 107 HOH HOH . 
F 6 HOH A 155 455 98 HOH HOH . 
F 6 HOH A 156 456 122 HOH HOH . 
F 6 HOH A 157 457 155 HOH HOH . 
F 6 HOH A 158 458 87 HOH HOH . 
F 6 HOH A 159 459 136 HOH HOH . 
F 6 HOH A 160 460 177 HOH HOH . 
F 6 HOH A 161 461 99 HOH HOH . 
F 6 HOH A 162 462 163 HOH HOH . 
F 6 HOH A 163 463 47 HOH HOH . 
F 6 HOH A 164 464 70 HOH HOH . 
F 6 HOH A 165 465 96 HOH HOH . 
F 6 HOH A 166 466 146 HOH HOH . 
F 6 HOH A 167 467 185 HOH HOH . 
F 6 HOH A 168 468 57 HOH HOH . 
F 6 HOH A 169 469 106 HOH HOH . 
F 6 HOH A 170 470 12 HOH HOH . 
F 6 HOH A 171 471 80 HOH HOH . 
F 6 HOH A 172 472 113 HOH HOH . 
F 6 HOH A 173 473 168 HOH HOH . 
F 6 HOH A 174 474 162 HOH HOH . 
F 6 HOH A 175 475 190 HOH HOH . 
F 6 HOH A 176 476 194 HOH HOH . 
F 6 HOH A 177 477 149 HOH HOH . 
F 6 HOH A 178 478 77 HOH HOH . 
F 6 HOH A 179 479 181 HOH HOH . 
F 6 HOH A 180 480 37 HOH HOH . 
F 6 HOH A 181 481 166 HOH HOH . 
F 6 HOH A 182 482 119 HOH HOH . 
F 6 HOH A 183 483 67 HOH HOH . 
F 6 HOH A 184 484 164 HOH HOH . 
F 6 HOH A 185 485 175 HOH HOH . 
F 6 HOH A 186 486 108 HOH HOH . 
F 6 HOH A 187 487 40 HOH HOH . 
F 6 HOH A 188 488 171 HOH HOH . 
F 6 HOH A 189 489 193 HOH HOH . 
F 6 HOH A 190 490 27 HOH HOH . 
F 6 HOH A 191 491 191 HOH HOH . 
F 6 HOH A 192 492 161 HOH HOH . 
F 6 HOH A 193 493 111 HOH HOH . 
F 6 HOH A 194 494 112 HOH HOH . 
F 6 HOH A 195 495 72 HOH HOH . 
F 6 HOH A 196 496 180 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . A . C 3 1.52 12.399 19.058 0.57 20.11 ? C1 MPD 202 A 1 
HETATM 2 C C2 MPD . A . C 3 0.47 11.392 19.51 0.57 19.97 ? C2 MPD 202 A 1 
HETATM 3 O O2 MPD . A . C 3 -0.376 11.106 18.368 0.57 21.23 ? O2 MPD 202 A 1 
HETATM 4 C CM MPD . A . C 3 -0.388 12.021 20.602 0.57 19.8 ? CM MPD 202 A 1 
HETATM 5 C C3 MPD . A . C 3 1.081 10.095 20.054 0.57 18.94 ? C3 MPD 202 A 1 
HETATM 6 C C4 MPD . A . C 3 2.161 9.45 19.188 0.57 18.12 ? C4 MPD 202 A 1 
HETATM 7 O O4 MPD . A . C 3 3.404 10.093 19.36 0.57 17.1 ? O4 MPD 202 A 1 
HETATM 8 C C5 MPD . A . C 3 2.343 7.985 19.575 0.57 17.5 ? C5 MPD 202 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#