data_8FCB # _model_server_result.job_id TU7iwZ75VNMSRjyBm9E3lg _model_server_result.datetime_utc '2024-10-11 06:21:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fcb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":902}' # _entry.id 8FCB # _exptl.entry_id 8FCB _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FCB _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FCB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N ? 4 N N N ? 4 P N N # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 501 n n CBA CAB Y01 sing 502 n n CBA CAN Y01 sing 503 n n CAN CAJ Y01 sing 504 n n CAJ CAO Y01 sing 505 n n CAO CBB Y01 sing 506 n n CBB CAC Y01 sing 507 n n CBB CBE Y01 sing 508 n n CBE CAP Y01 sing 509 n n CBE CBI Y01 sing 510 n n CAP CAQ Y01 sing 511 n n CAQ CBG Y01 sing 512 n n CBG CBI Y01 sing 513 n n CBG CBD Y01 sing 514 n n CBI CAE Y01 sing 515 n n CBI CAU Y01 sing 516 n n CAU CAS Y01 sing 517 n n CAS CBF Y01 sing 518 n n CBF CBD Y01 sing 519 n n CBF CBH Y01 sing 520 n n CBD CAK Y01 sing 521 n n CAK CAI Y01 sing 522 n n CAI CAZ Y01 doub 523 n n CAZ CAV Y01 sing 524 n n CAZ CBH Y01 sing 525 n n CAV CBC Y01 sing 526 n n CBH CAD Y01 sing 527 n n CBH CAT Y01 sing 528 n n CAT CAR Y01 sing 529 n n CAR CBC Y01 sing 530 n n CBC OAW Y01 sing 531 n n OAW CAY Y01 sing 532 n n CAY OAG Y01 doub 533 n n CAY CAM Y01 sing 534 n n CAM CAL Y01 sing 535 n n CAL CAX Y01 sing 536 n n CAX OAH Y01 sing 537 n n CAX OAF Y01 doub 538 n n CAA HAA1 Y01 sing 539 n n CAA HAA2 Y01 sing 540 n n CAA HAA3 Y01 sing 541 n n CBA HBA Y01 sing 542 n n CAB HAB1 Y01 sing 543 n n CAB HAB2 Y01 sing 544 n n CAB HAB3 Y01 sing 545 n n CAN HAN1 Y01 sing 546 n n CAN HAN2 Y01 sing 547 n n CAJ HAJ1 Y01 sing 548 n n CAJ HAJ2 Y01 sing 549 n n CAO HAO1 Y01 sing 550 n n CAO HAO2 Y01 sing 551 n n CBB HBB Y01 sing 552 n n CAC HAC1 Y01 sing 553 n n CAC HAC2 Y01 sing 554 n n CAC HAC3 Y01 sing 555 n n CBE HBE Y01 sing 556 n n CAP HAP1 Y01 sing 557 n n CAP HAP2 Y01 sing 558 n n CAQ HAQ1 Y01 sing 559 n n CAQ HAQ2 Y01 sing 560 n n CBG HBG Y01 sing 561 n n CBD HBD Y01 sing 562 n n CAE HAE1 Y01 sing 563 n n CAE HAE2 Y01 sing 564 n n CAE HAE3 Y01 sing 565 n n CAU HAU1 Y01 sing 566 n n CAU HAU2 Y01 sing 567 n n CAS HAS1 Y01 sing 568 n n CAS HAS2 Y01 sing 569 n n CBF HBF Y01 sing 570 n n CAK HAK1 Y01 sing 571 n n CAK HAK2 Y01 sing 572 n n CAI HAI Y01 sing 573 n n CAV HAV1 Y01 sing 574 n n CAV HAV2 Y01 sing 575 n n CBC HBC Y01 sing 576 n n CAD HAD1 Y01 sing 577 n n CAD HAD2 Y01 sing 578 n n CAD HAD3 Y01 sing 579 n n CAT HAT1 Y01 sing 580 n n CAT HAT2 Y01 sing 581 n n CAR HAR1 Y01 sing 582 n n CAR HAR2 Y01 sing 583 n n CAM HAM1 Y01 sing 584 n n CAM HAM2 Y01 sing 585 n n CAL HAL1 Y01 sing 586 n n CAL HAL2 Y01 sing 587 n n OAH HAH Y01 sing 588 n n # _atom_sites.entry_id 8FCB _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 XQ3 A 1 901 801 XQ3 XQ3 . J 3 XQ3 B 1 901 801 XQ3 XQ3 . K 4 Y01 B 1 902 1001 Y01 Y01 . L 4 Y01 C 1 1001 1001 Y01 Y01 . M 3 XQ3 C 1 1002 801 XQ3 XQ3 . N 4 Y01 C 1 1003 1001 Y01 Y01 . O 3 XQ3 D 1 901 801 XQ3 XQ3 . P 4 Y01 D 1 902 1001 Y01 Y01 . Q 5 GSP E 1 301 301 GSP GSP . R 5 GSP F 1 301 301 GSP GSP . S 5 GSP G 1 301 301 GSP GSP . T 5 GSP H 1 301 301 GSP GSP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . P 4 155.29 139.65 168.29 1 30 ? CAA Y01 902 D 1 HETATM 2 C CBA Y01 . . . P 4 155.075 140.433 169.599 1 30 ? CBA Y01 902 D 1 HETATM 3 C CAB Y01 . . . P 4 153.768 141.245 169.563 1 30 ? CAB Y01 902 D 1 HETATM 4 C CAN Y01 . . . P 4 156.291 141.321 169.91 1 30 ? CAN Y01 902 D 1 HETATM 5 C CAJ Y01 . . . P 4 156.657 141.27 171.407 1 30 ? CAJ Y01 902 D 1 HETATM 6 C CAO Y01 . . . P 4 157.685 140.166 171.748 1 30 ? CAO Y01 902 D 1 HETATM 7 C CBB Y01 . . . P 4 157.356 139.32 173.002 1 30 ? CBB Y01 902 D 1 HETATM 8 C CAC Y01 . . . P 4 158.168 138.012 172.942 1 30 ? CAC Y01 902 D 1 HETATM 9 C CBE Y01 . . . P 4 157.698 140.137 174.276 1 30 ? CBE Y01 902 D 1 HETATM 10 C CAP Y01 . . . P 4 156.528 141.126 174.539 1 30 ? CAP Y01 902 D 1 HETATM 11 C CAQ Y01 . . . P 4 156.533 141.405 176.066 1 30 ? CAQ Y01 902 D 1 HETATM 12 C CBG Y01 . . . P 4 157.758 140.611 176.579 1 30 ? CBG Y01 902 D 1 HETATM 13 C CBI Y01 . . . P 4 157.764 139.393 175.644 1 30 ? CBI Y01 902 D 1 HETATM 14 C CAE Y01 . . . P 4 156.549 138.483 175.896 1 30 ? CAE Y01 902 D 1 HETATM 15 C CAU Y01 . . . P 4 159.09 138.652 175.854 1 30 ? CAU Y01 902 D 1 HETATM 16 C CAS Y01 . . . P 4 159.47 138.396 177.327 1 30 ? CAS Y01 902 D 1 HETATM 17 C CBF Y01 . . . P 4 159.162 139.524 178.361 1 30 ? CBF Y01 902 D 1 HETATM 18 C CBD Y01 . . . P 4 157.849 140.292 178.081 1 30 ? CBD Y01 902 D 1 HETATM 19 C CAK Y01 . . . P 4 157.888 141.554 178.942 1 30 ? CAK Y01 902 D 1 HETATM 20 C CAI Y01 . . . P 4 158.338 141.231 180.381 1 30 ? CAI Y01 902 D 1 HETATM 21 C CAZ Y01 . . . P 4 158.874 140.076 180.831 1 30 ? CAZ Y01 902 D 1 HETATM 22 C CAV Y01 . . . P 4 159.345 139.69 182.25 1 30 ? CAV Y01 902 D 1 HETATM 23 C CBH Y01 . . . P 4 159.026 138.923 179.803 1 30 ? CBH Y01 902 D 1 HETATM 24 C CAD Y01 . . . P 4 157.967 137.808 179.983 1 30 ? CAD Y01 902 D 1 HETATM 25 C CAT Y01 . . . P 4 160.474 138.356 179.861 1 30 ? CAT Y01 902 D 1 HETATM 26 C CAR Y01 . . . P 4 161.009 138.046 181.276 1 30 ? CAR Y01 902 D 1 HETATM 27 C CBC Y01 . . . P 4 160.795 139.177 182.294 1 30 ? CBC Y01 902 D 1 HETATM 28 O OAW Y01 . . . P 4 161.098 138.661 183.598 1 30 ? OAW Y01 902 D 1 HETATM 29 C CAY Y01 . . . P 4 160.31 139.168 184.68 1 30 ? CAY Y01 902 D 1 HETATM 30 O OAG Y01 . . . P 4 159.349 138.544 185.064 1 30 ? OAG Y01 902 D 1 HETATM 31 C CAM Y01 . . . P 4 160.678 140.511 185.341 1 30 ? CAM Y01 902 D 1 HETATM 32 C CAL Y01 . . . P 4 160.802 140.408 186.874 1 30 ? CAL Y01 902 D 1 HETATM 33 C CAX Y01 . . . P 4 162.241 140.636 187.374 1 30 ? CAX Y01 902 D 1 HETATM 34 O OAH Y01 . . . P 4 163.179 140.436 186.637 1 30 ? OAH Y01 902 D 1 HETATM 35 O OAF Y01 . . . P 4 162.437 141.015 188.507 1 30 ? OAF Y01 902 D 1 HETATM 36 H HAA1 Y01 . . . P 4 155.689 140.304 167.544 1 30 ? HAA1 Y01 902 D 1 HETATM 37 H HAA2 Y01 . . . P 4 155.979 138.851 168.466 1 30 ? HAA2 Y01 902 D 1 HETATM 38 H HAA3 Y01 . . . P 4 154.356 139.25 167.953 1 30 ? HAA3 Y01 902 D 1 HETATM 39 H HBA Y01 . . . P 4 154.987 139.72 170.39 1 30 ? HBA Y01 902 D 1 HETATM 40 H HAB1 Y01 . . . P 4 152.975 140.663 169.985 1 30 ? HAB1 Y01 902 D 1 HETATM 41 H HAB2 Y01 . . . P 4 153.88 142.148 170.127 1 30 ? HAB2 Y01 902 D 1 HETATM 42 H HAB3 Y01 . . . P 4 153.533 141.482 168.547 1 30 ? HAB3 Y01 902 D 1 HETATM 43 H HAN1 Y01 . . . P 4 157.123 140.977 169.335 1 30 ? HAN1 Y01 902 D 1 HETATM 44 H HAN2 Y01 . . . P 4 156.071 142.332 169.632 1 30 ? HAN2 Y01 902 D 1 HETATM 45 H HAJ1 Y01 . . . P 4 155.76 141.097 171.961 1 30 ? HAJ1 Y01 902 D 1 HETATM 46 H HAJ2 Y01 . . . P 4 157.055 142.223 171.689 1 30 ? HAJ2 Y01 902 D 1 HETATM 47 H HAO1 Y01 . . . P 4 158.64 140.626 171.89 1 30 ? HAO1 Y01 902 D 1 HETATM 48 H HAO2 Y01 . . . P 4 157.753 139.508 170.907 1 30 ? HAO2 Y01 902 D 1 HETATM 49 H HBB Y01 . . . P 4 156.314 139.082 172.994 1 30 ? HBB Y01 902 D 1 HETATM 50 H HAC1 Y01 . . . P 4 157.735 137.296 173.61 1 30 ? HAC1 Y01 902 D 1 HETATM 51 H HAC2 Y01 . . . P 4 158.154 137.62 171.946 1 30 ? HAC2 Y01 902 D 1 HETATM 52 H HAC3 Y01 . . . P 4 159.182 138.202 173.229 1 30 ? HAC3 Y01 902 D 1 HETATM 53 H HBE Y01 . . . P 4 158.603 140.686 174.127 1 30 ? HBE Y01 902 D 1 HETATM 54 H HAP1 Y01 . . . P 4 155.598 140.677 174.261 1 30 ? HAP1 Y01 902 D 1 HETATM 55 H HAP2 Y01 . . . P 4 156.682 142.036 173.999 1 30 ? HAP2 Y01 902 D 1 HETATM 56 H HAQ1 Y01 . . . P 4 156.662 142.45 176.24 1 30 ? HAQ1 Y01 902 D 1 HETATM 57 H HAQ2 Y01 . . . P 4 155.631 141.045 176.516 1 30 ? HAQ2 Y01 902 D 1 HETATM 58 H HBG Y01 . . . P 4 158.624 141.187 176.337 1 30 ? HBG Y01 902 D 1 HETATM 59 H HBD Y01 . . . P 4 156.998 139.72 178.37 1 30 ? HBD Y01 902 D 1 HETATM 60 H HAE1 Y01 . . . P 4 156.899 137.491 176.098 1 30 ? HAE1 Y01 902 D 1 HETATM 61 H HAE2 Y01 . . . P 4 155.988 138.838 176.732 1 30 ? HAE2 Y01 902 D 1 HETATM 62 H HAE3 Y01 . . . P 4 155.915 138.477 175.037 1 30 ? HAE3 Y01 902 D 1 HETATM 63 H HAU1 Y01 . . . P 4 159.03 137.696 175.379 1 30 ? HAU1 Y01 902 D 1 HETATM 64 H HAU2 Y01 . . . P 4 159.875 139.216 175.396 1 30 ? HAU2 Y01 902 D 1 HETATM 65 H HAS1 Y01 . . . P 4 158.98 137.495 177.62 1 30 ? HAS1 Y01 902 D 1 HETATM 66 H HAS2 Y01 . . . P 4 160.525 138.216 177.32 1 30 ? HAS2 Y01 902 D 1 HETATM 67 H HBF Y01 . . . P 4 159.962 140.232 178.335 1 30 ? HBF Y01 902 D 1 HETATM 68 H HAK1 Y01 . . . P 4 158.669 142.159 178.532 1 30 ? HAK1 Y01 902 D 1 HETATM 69 H HAK2 Y01 . . . P 4 156.876 141.896 179.004 1 30 ? HAK2 Y01 902 D 1 HETATM 70 H HAI Y01 . . . P 4 158.235 142.02 181.094 1 30 ? HAI Y01 902 D 1 HETATM 71 H HAV1 Y01 . . . P 4 158.734 138.867 182.551 1 30 ? HAV1 Y01 902 D 1 HETATM 72 H HAV2 Y01 . . . P 4 159.363 140.616 182.784 1 30 ? HAV2 Y01 902 D 1 HETATM 73 H HBC Y01 . . . P 4 161.463 139.985 182.078 1 30 ? HBC Y01 902 D 1 HETATM 74 H HAD1 Y01 . . . P 4 157.036 138.081 179.534 1 30 ? HAD1 Y01 902 D 1 HETATM 75 H HAD2 Y01 . . . P 4 157.804 137.636 181.024 1 30 ? HAD2 Y01 902 D 1 HETATM 76 H HAD3 Y01 . . . P 4 158.318 136.901 179.538 1 30 ? HAD3 Y01 902 D 1 HETATM 77 H HAT1 Y01 . . . P 4 160.498 137.42 179.348 1 30 ? HAT1 Y01 902 D 1 HETATM 78 H HAT2 Y01 . . . P 4 161.166 139.022 179.391 1 30 ? HAT2 Y01 902 D 1 HETATM 79 H HAR1 Y01 . . . P 4 160.513 137.17 181.637 1 30 ? HAR1 Y01 902 D 1 HETATM 80 H HAR2 Y01 . . . P 4 162.058 137.845 181.208 1 30 ? HAR2 Y01 902 D 1 HETATM 81 H HAM1 Y01 . . . P 4 159.916 141.224 185.107 1 30 ? HAM1 Y01 902 D 1 HETATM 82 H HAM2 Y01 . . . P 4 161.604 140.854 184.933 1 30 ? HAM2 Y01 902 D 1 HETATM 83 H HAL1 Y01 . . . P 4 160.162 141.142 187.319 1 30 ? HAL1 Y01 902 D 1 HETATM 84 H HAL2 Y01 . . . P 4 160.476 139.438 187.185 1 30 ? HAL2 Y01 902 D 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 390 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 84 #