data_8FCD # _model_server_result.job_id b7gXtCpwW8Qc6T4IH_vwTg _model_server_result.datetime_utc '2024-12-26 11:15:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fcd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8FCD # _exptl.entry_id 8FCD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 421.454 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(8-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}-6-oxo-5,6,7,8-tetrahydropteridin-2-yl)amino]benzonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FCD _cell.length_a 119.749 _cell.length_b 155.234 _cell.length_c 155 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H19 N7 O' _chem_comp.formula_weight 421.454 _chem_comp.id ZJ2 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(8-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}-6-oxo-5,6,7,8-tetrahydropteridin-2-yl)amino]benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N31 C30 ZJ2 trip 391 n n C30 C19 ZJ2 sing 392 n n C19 C18 ZJ2 doub 393 e n C18 C11 ZJ2 sing 394 n n C10 C11 ZJ2 doub 395 n y C10 C09 ZJ2 sing 396 n y C11 C12 ZJ2 sing 397 n y C15 C09 ZJ2 sing 398 n n C09 C14 ZJ2 doub 399 n y C12 C13 ZJ2 doub 400 n y C13 C14 ZJ2 sing 401 n y C13 C16 ZJ2 sing 402 n n C14 N17 ZJ2 sing 403 n n N32 C27 ZJ2 trip 404 n n C27 C24 ZJ2 sing 405 n n C23 C24 ZJ2 doub 406 n y C23 C22 ZJ2 sing 407 n y N17 C20 ZJ2 sing 408 n n N17 C02 ZJ2 sing 409 n n C20 C28 ZJ2 sing 410 n n C24 C25 ZJ2 sing 411 n y C22 C21 ZJ2 doub 412 n y O29 C28 ZJ2 doub 413 n n C28 N07 ZJ2 sing 414 n n C02 N03 ZJ2 doub 415 n y C02 C01 ZJ2 sing 416 n y N03 C04 ZJ2 sing 417 n y C25 C26 ZJ2 doub 418 n y C21 C26 ZJ2 sing 419 n y C21 N08 ZJ2 sing 420 n n N07 C01 ZJ2 sing 421 n n C01 C06 ZJ2 doub 422 n y C04 N08 ZJ2 sing 423 n n C04 N05 ZJ2 doub 424 n y C06 N05 ZJ2 sing 425 n y C06 H1 ZJ2 sing 426 n n C10 H2 ZJ2 sing 427 n n C12 H3 ZJ2 sing 428 n n C15 H4 ZJ2 sing 429 n n C15 H5 ZJ2 sing 430 n n C15 H6 ZJ2 sing 431 n n C16 H7 ZJ2 sing 432 n n C16 H8 ZJ2 sing 433 n n C16 H9 ZJ2 sing 434 n n C18 H10 ZJ2 sing 435 n n C19 H11 ZJ2 sing 436 n n C20 H12 ZJ2 sing 437 n n C20 H13 ZJ2 sing 438 n n C22 H14 ZJ2 sing 439 n n C23 H15 ZJ2 sing 440 n n C25 H16 ZJ2 sing 441 n n C26 H17 ZJ2 sing 442 n n N07 H18 ZJ2 sing 443 n n N08 H19 ZJ2 sing 444 n n # _atom_sites.entry_id 8FCD _atom_sites.fract_transf_matrix[1][1] 0.008351 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZJ2 A 1 601 1 ZJ2 ZJ2 . D 4 TLA A 1 602 1 TLA TLA . E 5 HOH A 1 701 81 HOH HOH . E 5 HOH A 2 702 6 HOH HOH . E 5 HOH A 3 703 87 HOH HOH . E 5 HOH A 4 704 10 HOH HOH . E 5 HOH A 5 705 107 HOH HOH . E 5 HOH A 6 706 82 HOH HOH . E 5 HOH A 7 707 102 HOH HOH . E 5 HOH A 8 708 71 HOH HOH . E 5 HOH A 9 709 5 HOH HOH . E 5 HOH A 10 710 15 HOH HOH . E 5 HOH A 11 711 79 HOH HOH . E 5 HOH A 12 712 100 HOH HOH . E 5 HOH A 13 713 2 HOH HOH . E 5 HOH A 14 714 65 HOH HOH . E 5 HOH A 15 715 78 HOH HOH . E 5 HOH A 16 716 4 HOH HOH . E 5 HOH A 17 717 88 HOH HOH . E 5 HOH A 18 718 83 HOH HOH . E 5 HOH A 19 719 3 HOH HOH . E 5 HOH A 20 720 77 HOH HOH . E 5 HOH A 21 721 19 HOH HOH . E 5 HOH A 22 722 72 HOH HOH . E 5 HOH A 23 723 60 HOH HOH . E 5 HOH A 24 724 28 HOH HOH . E 5 HOH A 25 725 29 HOH HOH . E 5 HOH A 26 726 94 HOH HOH . E 5 HOH A 27 727 50 HOH HOH . E 5 HOH A 28 728 98 HOH HOH . E 5 HOH A 29 729 90 HOH HOH . E 5 HOH A 30 730 95 HOH HOH . E 5 HOH A 31 731 14 HOH HOH . E 5 HOH A 32 732 48 HOH HOH . E 5 HOH A 33 733 51 HOH HOH . E 5 HOH A 34 734 16 HOH HOH . E 5 HOH A 35 735 84 HOH HOH . E 5 HOH A 36 736 125 HOH HOH . E 5 HOH A 37 737 93 HOH HOH . E 5 HOH A 38 738 105 HOH HOH . E 5 HOH A 39 739 24 HOH HOH . E 5 HOH A 40 740 70 HOH HOH . E 5 HOH A 41 741 26 HOH HOH . E 5 HOH A 42 742 11 HOH HOH . E 5 HOH A 43 743 106 HOH HOH . E 5 HOH A 44 744 12 HOH HOH . E 5 HOH A 45 745 111 HOH HOH . E 5 HOH A 46 746 136 HOH HOH . E 5 HOH A 47 747 122 HOH HOH . E 5 HOH A 48 748 118 HOH HOH . E 5 HOH A 49 749 36 HOH HOH . E 5 HOH A 50 750 63 HOH HOH . E 5 HOH A 51 751 37 HOH HOH . E 5 HOH A 52 752 126 HOH HOH . E 5 HOH A 53 753 99 HOH HOH . E 5 HOH A 54 754 46 HOH HOH . E 5 HOH A 55 755 115 HOH HOH . E 5 HOH A 56 756 32 HOH HOH . E 5 HOH A 57 757 113 HOH HOH . E 5 HOH A 58 758 45 HOH HOH . E 5 HOH A 59 759 104 HOH HOH . E 5 HOH A 60 760 38 HOH HOH . E 5 HOH A 61 761 139 HOH HOH . E 5 HOH A 62 762 42 HOH HOH . E 5 HOH A 63 763 64 HOH HOH . E 5 HOH A 64 764 109 HOH HOH . E 5 HOH A 65 765 49 HOH HOH . E 5 HOH A 66 766 135 HOH HOH . E 5 HOH A 67 767 130 HOH HOH . E 5 HOH A 68 768 44 HOH HOH . E 5 HOH A 69 769 137 HOH HOH . E 5 HOH A 70 770 134 HOH HOH . E 5 HOH A 71 771 89 HOH HOH . E 5 HOH A 72 772 123 HOH HOH . E 5 HOH A 73 773 129 HOH HOH . E 5 HOH A 74 774 47 HOH HOH . E 5 HOH A 75 775 133 HOH HOH . E 5 HOH A 76 776 61 HOH HOH . F 5 HOH B 1 501 97 HOH HOH . F 5 HOH B 2 502 27 HOH HOH . F 5 HOH B 3 503 20 HOH HOH . F 5 HOH B 4 504 18 HOH HOH . F 5 HOH B 5 505 30 HOH HOH . F 5 HOH B 6 506 17 HOH HOH . F 5 HOH B 7 507 80 HOH HOH . F 5 HOH B 8 508 1 HOH HOH . F 5 HOH B 9 509 22 HOH HOH . F 5 HOH B 10 510 25 HOH HOH . F 5 HOH B 11 511 103 HOH HOH . F 5 HOH B 12 512 117 HOH HOH . F 5 HOH B 13 513 67 HOH HOH . F 5 HOH B 14 514 34 HOH HOH . F 5 HOH B 15 515 110 HOH HOH . F 5 HOH B 16 516 73 HOH HOH . F 5 HOH B 17 517 128 HOH HOH . F 5 HOH B 18 518 119 HOH HOH . F 5 HOH B 19 519 7 HOH HOH . F 5 HOH B 20 520 58 HOH HOH . F 5 HOH B 21 521 108 HOH HOH . F 5 HOH B 22 522 131 HOH HOH . F 5 HOH B 23 523 33 HOH HOH . F 5 HOH B 24 524 8 HOH HOH . F 5 HOH B 25 525 114 HOH HOH . F 5 HOH B 26 526 40 HOH HOH . F 5 HOH B 27 527 9 HOH HOH . F 5 HOH B 28 528 75 HOH HOH . F 5 HOH B 29 529 121 HOH HOH . F 5 HOH B 30 530 41 HOH HOH . F 5 HOH B 31 531 39 HOH HOH . F 5 HOH B 32 532 62 HOH HOH . F 5 HOH B 33 533 112 HOH HOH . F 5 HOH B 34 534 54 HOH HOH . F 5 HOH B 35 535 52 HOH HOH . F 5 HOH B 36 536 69 HOH HOH . F 5 HOH B 37 537 55 HOH HOH . F 5 HOH B 38 538 31 HOH HOH . F 5 HOH B 39 539 85 HOH HOH . F 5 HOH B 40 540 127 HOH HOH . F 5 HOH B 41 541 13 HOH HOH . F 5 HOH B 42 542 66 HOH HOH . F 5 HOH B 43 543 96 HOH HOH . F 5 HOH B 44 544 56 HOH HOH . F 5 HOH B 45 545 91 HOH HOH . F 5 HOH B 46 546 21 HOH HOH . F 5 HOH B 47 547 120 HOH HOH . F 5 HOH B 48 548 59 HOH HOH . F 5 HOH B 49 549 92 HOH HOH . F 5 HOH B 50 550 124 HOH HOH . F 5 HOH B 51 551 53 HOH HOH . F 5 HOH B 52 552 86 HOH HOH . F 5 HOH B 53 553 132 HOH HOH . F 5 HOH B 54 554 35 HOH HOH . F 5 HOH B 55 555 76 HOH HOH . F 5 HOH B 56 556 57 HOH HOH . F 5 HOH B 57 557 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 ZJ2 . . . C 3 -12.17 -62.099 -14.655 1 43.53 ? C01 ZJ2 601 A 1 HETATM 2 C C02 ZJ2 . . . C 3 -11.661 -62.962 -15.636 1 46 ? C02 ZJ2 601 A 1 HETATM 3 C C04 ZJ2 . . . C 3 -9.721 -63.255 -14.416 1 38.63 ? C04 ZJ2 601 A 1 HETATM 4 C C06 ZJ2 . . . C 3 -11.369 -61.856 -13.535 1 44.54 ? C06 ZJ2 601 A 1 HETATM 5 C C09 ZJ2 . . . C 3 -11.374 -63.1 -19.017 1 52.74 ? C09 ZJ2 601 A 1 HETATM 6 C C10 ZJ2 . . . C 3 -10.768 -63.725 -20.103 1 49.58 ? C10 ZJ2 601 A 1 HETATM 7 C C11 ZJ2 . . . C 3 -10.518 -65.097 -20.092 1 57.81 ? C11 ZJ2 601 A 1 HETATM 8 C C12 ZJ2 . . . C 3 -10.91 -65.862 -18.991 1 49.37 ? C12 ZJ2 601 A 1 HETATM 9 C C13 ZJ2 . . . C 3 -11.543 -65.259 -17.887 1 56.91 ? C13 ZJ2 601 A 1 HETATM 10 C C14 ZJ2 . . . C 3 -11.783 -63.855 -17.878 1 48.27 ? C14 ZJ2 601 A 1 HETATM 11 C C15 ZJ2 . . . C 3 -11.569 -61.598 -19.15 1 49.48 ? C15 ZJ2 601 A 1 HETATM 12 C C16 ZJ2 . . . C 3 -11.941 -66.174 -16.725 1 53.86 ? C16 ZJ2 601 A 1 HETATM 13 C C18 ZJ2 . . . C 3 -9.911 -65.67 -21.299 1 65.17 ? C18 ZJ2 601 A 1 HETATM 14 C C19 ZJ2 . . . C 3 -9.614 -66.951 -21.555 1 76.36 ? C19 ZJ2 601 A 1 HETATM 15 C C20 ZJ2 . . . C 3 -13.849 -62.981 -16.714 1 55.74 ? C20 ZJ2 601 A 1 HETATM 16 C C21 ZJ2 . . . C 3 -7.79 -64.842 -14.996 1 43.58 ? C21 ZJ2 601 A 1 HETATM 17 C C22 ZJ2 . . . C 3 -8.346 -65.336 -16.19 1 48.43 ? C22 ZJ2 601 A 1 HETATM 18 C C23 ZJ2 . . . C 3 -7.743 -66.351 -16.929 1 41.42 ? C23 ZJ2 601 A 1 HETATM 19 C C24 ZJ2 . . . C 3 -6.556 -66.873 -16.425 1 54.7 ? C24 ZJ2 601 A 1 HETATM 20 C C25 ZJ2 . . . C 3 -5.982 -66.387 -15.244 1 55.44 ? C25 ZJ2 601 A 1 HETATM 21 C C26 ZJ2 . . . C 3 -6.593 -65.37 -14.527 1 43.45 ? C26 ZJ2 601 A 1 HETATM 22 C C27 ZJ2 . . . C 3 -5.848 -67.923 -17.117 1 59.35 ? C27 ZJ2 601 A 1 HETATM 23 C C28 ZJ2 . . . C 3 -14.324 -61.859 -15.741 1 55.2 ? C28 ZJ2 601 A 1 HETATM 24 C C30 ZJ2 . . . C 3 -9.1 -67.261 -22.847 1 96.05 ? C30 ZJ2 601 A 1 HETATM 25 N N03 ZJ2 . . . C 3 -10.445 -63.536 -15.516 1 41.34 ? N03 ZJ2 601 A 1 HETATM 26 N N05 ZJ2 . . . C 3 -10.135 -62.437 -13.413 1 48.35 ? N05 ZJ2 601 A 1 HETATM 27 N N07 ZJ2 . . . C 3 -13.42 -61.524 -14.799 1 53.31 ? N07 ZJ2 601 A 1 HETATM 28 N N08 ZJ2 . . . C 3 -8.465 -63.838 -14.292 1 41.56 ? N08 ZJ2 601 A 1 HETATM 29 N N17 ZJ2 . . . C 3 -12.395 -63.247 -16.772 1 45.48 ? N17 ZJ2 601 A 1 HETATM 30 N N31 ZJ2 . . . C 3 -8.754 -67.486 -23.932 1 98.56 ? N31 ZJ2 601 A 1 HETATM 31 N N32 ZJ2 . . . C 3 -5.251 -68.758 -17.636 1 72.15 ? N32 ZJ2 601 A 1 HETATM 32 O O29 ZJ2 . . . C 3 -15.432 -61.326 -15.806 1 59.87 ? O29 ZJ2 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 32 #