data_8FFN # _model_server_result.job_id GRFEzNFRELzDEflFqoNDow _model_server_result.datetime_utc '2025-02-18 22:18:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ffn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":801}' # _entry.id 8FFN # _exptl.entry_id 8FFN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FFN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 J N N ? 3 K N N ? 3 N N N ? 3 O N N ? 3 R N N ? 3 S N N # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 334 n n N C13 POV sing 335 n n N C14 POV sing 336 n n N C15 POV sing 337 n n P O11 POV sing 338 n n P O12 POV sing 339 n n P O13 POV sing 340 n n P O14 POV doub 341 n n C1 C2 POV sing 342 n n C1 O11 POV sing 343 n n C1 H1 POV sing 344 n n C1 H1A POV sing 345 n n C2 C3 POV sing 346 n n C2 O21 POV sing 347 n n C2 H2 POV sing 348 n n C3 O31 POV sing 349 n n C3 H3 POV sing 350 n n C3 H3A POV sing 351 n n C210 C211 POV sing 352 n n C210 C29 POV doub 353 z n C210 H210 POV sing 354 n n C310 C311 POV sing 355 n n C310 C39 POV sing 356 n n C310 H310 POV sing 357 n n C310 H31A POV sing 358 n n C11 C12 POV sing 359 n n C11 O12 POV sing 360 n n C11 H11 POV sing 361 n n C11 H11A POV sing 362 n n C211 C212 POV sing 363 n n C211 H211 POV sing 364 n n C211 H21A POV sing 365 n n C311 C312 POV sing 366 n n C311 H311 POV sing 367 n n C311 H31B POV sing 368 n n C12 H12 POV sing 369 n n C12 H12A POV sing 370 n n C212 C213 POV sing 371 n n C212 H212 POV sing 372 n n C212 H21B POV sing 373 n n C312 C313 POV sing 374 n n C312 H312 POV sing 375 n n C312 H31C POV sing 376 n n C13 H13 POV sing 377 n n C13 H13A POV sing 378 n n C13 H13B POV sing 379 n n C213 C214 POV sing 380 n n C213 H213 POV sing 381 n n C213 H21C POV sing 382 n n C313 C314 POV sing 383 n n C313 H313 POV sing 384 n n C313 H31D POV sing 385 n n C14 H14 POV sing 386 n n C14 H14A POV sing 387 n n C14 H14B POV sing 388 n n C214 C215 POV sing 389 n n C214 H214 POV sing 390 n n C214 H21D POV sing 391 n n C314 C315 POV sing 392 n n C314 H314 POV sing 393 n n C314 H31E POV sing 394 n n C15 H15 POV sing 395 n n C15 H15A POV sing 396 n n C15 H15B POV sing 397 n n C215 C216 POV sing 398 n n C215 H215 POV sing 399 n n C215 H21E POV sing 400 n n C315 C316 POV sing 401 n n C315 H315 POV sing 402 n n C315 H31F POV sing 403 n n C216 C217 POV sing 404 n n C216 H216 POV sing 405 n n C216 H21F POV sing 406 n n C316 H316 POV sing 407 n n C316 H31G POV sing 408 n n C316 H31H POV sing 409 n n C217 C218 POV sing 410 n n C217 H217 POV sing 411 n n C217 H21G POV sing 412 n n C218 H218 POV sing 413 n n C218 H21H POV sing 414 n n C218 H21J POV sing 415 n n C21 O21 POV sing 416 n n C21 C22 POV sing 417 n n C21 O22 POV doub 418 n n C22 C23 POV sing 419 n n C22 H22 POV sing 420 n n C22 H22A POV sing 421 n n C23 C24 POV sing 422 n n C23 H23 POV sing 423 n n C23 H23A POV sing 424 n n C24 C25 POV sing 425 n n C24 H24 POV sing 426 n n C24 H24A POV sing 427 n n C25 C26 POV sing 428 n n C25 H25 POV sing 429 n n C25 H25A POV sing 430 n n C26 C27 POV sing 431 n n C26 H26 POV sing 432 n n C26 H26A POV sing 433 n n C27 C28 POV sing 434 n n C27 H27 POV sing 435 n n C27 H27A POV sing 436 n n C28 C29 POV sing 437 n n C28 H28 POV sing 438 n n C28 H28A POV sing 439 n n C29 H29 POV sing 440 n n C31 O31 POV sing 441 n n C31 C32 POV sing 442 n n C31 O32 POV doub 443 n n C32 C33 POV sing 444 n n C32 H32 POV sing 445 n n C32 H32A POV sing 446 n n C33 C34 POV sing 447 n n C33 H33 POV sing 448 n n C33 H33A POV sing 449 n n C34 C35 POV sing 450 n n C34 H34 POV sing 451 n n C34 H34A POV sing 452 n n C35 C36 POV sing 453 n n C35 H35 POV sing 454 n n C35 H35A POV sing 455 n n C36 C37 POV sing 456 n n C36 H36 POV sing 457 n n C36 H36A POV sing 458 n n C37 C38 POV sing 459 n n C37 H37 POV sing 460 n n C37 H37A POV sing 461 n n C38 C39 POV sing 462 n n C38 H38 POV sing 463 n n C38 H38A POV sing 464 n n C39 H39 POV sing 465 n n C39 H39A POV sing 466 n n # _atom_sites.entry_id 8FFN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 R2R A 1 801 701 R2R R2R . F 3 POV A 1 802 701 POV POV . G 3 POV A 1 803 707 POV POV . H 4 ERG A 1 804 708 ERG ERG . I 4 ERG A 1 805 709 ERG ERG . J 3 POV B 1 801 701 POV POV . K 3 POV B 1 802 707 POV POV . L 4 ERG B 1 803 708 ERG ERG . M 4 ERG B 1 804 709 ERG ERG . N 3 POV C 1 801 701 POV POV . O 3 POV C 1 802 707 POV POV . P 4 ERG C 1 803 708 ERG ERG . Q 4 ERG C 1 804 709 ERG ERG . R 3 POV D 1 801 701 POV POV . S 3 POV D 1 802 707 POV POV . T 4 ERG D 1 803 708 ERG ERG . U 4 ERG D 1 804 709 ERG ERG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . J 3 135.683 95.941 83.006 1 51.02 ? N POV 801 B 1 HETATM 2 P P POV . . . J 3 137.003 99.669 85.492 1 58.62 ? P POV 801 B 1 HETATM 3 C C1 POV . . . J 3 138.51 100.184 87.6 1 44.86 ? C1 POV 801 B 1 HETATM 4 C C2 POV . . . J 3 139.397 99.552 88.693 1 42.95 ? C2 POV 801 B 1 HETATM 5 C C3 POV . . . J 3 139.255 98.025 88.68 1 43.75 ? C3 POV 801 B 1 HETATM 6 C C210 POV . . . J 3 137.458 105 99.924 1 43.12 ? C210 POV 801 B 1 HETATM 7 C C310 POV . . . J 3 139.278 99.246 100.579 1 42.62 ? C310 POV 801 B 1 HETATM 8 C C11 POV . . . J 3 137.351 97.298 84.362 1 45.44 ? C11 POV 801 B 1 HETATM 9 O O11 POV . . . J 3 137.969 99.19 86.753 1 47.92 ? O11 POV 801 B 1 HETATM 10 C C311 POV . . . J 3 139.932 100.049 101.737 1 47.32 ? C311 POV 801 B 1 HETATM 11 C C12 POV . . . J 3 135.924 96.662 84.289 1 42.94 ? C12 POV 801 B 1 HETATM 12 O O12 POV . . . J 3 137.268 98.696 84.174 1 51.08 ? O12 POV 801 B 1 HETATM 13 C C312 POV . . . J 3 139.027 99.984 103.003 1 47.42 ? C312 POV 801 B 1 HETATM 14 C C13 POV . . . J 3 136.816 95.049 82.649 1 45.51 ? C13 POV 801 B 1 HETATM 15 O O13 POV . . . J 3 135.548 99.577 85.9 1 48.08 -1 O13 POV 801 B 1 HETATM 16 C C313 POV . . . J 3 137.725 100.806 102.762 1 46.34 ? C313 POV 801 B 1 HETATM 17 C C14 POV . . . J 3 134.477 95.127 83.148 1 47.1 ? C14 POV 801 B 1 HETATM 18 O O14 POV . . . J 3 137.327 101.092 85.127 1 46.35 ? O14 POV 801 B 1 HETATM 19 C C314 POV . . . J 3 136.998 101.052 104.119 1 44.44 ? C314 POV 801 B 1 HETATM 20 C C15 POV . . . J 3 135.473 96.929 81.924 1 48.33 ? C15 POV 801 B 1 HETATM 21 C C315 POV . . . J 3 136.646 99.69 104.782 1 40.38 ? C315 POV 801 B 1 HETATM 22 C C21 POV . . . J 3 139.945 100.909 90.566 1 48.88 ? C21 POV 801 B 1 HETATM 23 O O21 POV . . . J 3 139.007 100.025 89.947 1 47.66 ? O21 POV 801 B 1 HETATM 24 C C22 POV . . . J 3 139.441 102.14 91.371 1 45.2 ? C22 POV 801 B 1 HETATM 25 O O22 POV . . . J 3 141.114 100.704 90.462 1 52.39 ? O22 POV 801 B 1 HETATM 26 C C23 POV . . . J 3 139.654 101.881 92.904 1 44.81 ? C23 POV 801 B 1 HETATM 27 C C24 POV . . . J 3 139.35 103.166 93.701 1 45.3 ? C24 POV 801 B 1 HETATM 28 C C25 POV . . . J 3 139.811 102.982 95.17 1 45.06 ? C25 POV 801 B 1 HETATM 29 C C26 POV . . . J 3 139.309 104.163 96.024 1 46.04 ? C26 POV 801 B 1 HETATM 30 C C27 POV . . . J 3 138.077 103.719 96.84 1 46.6 ? C27 POV 801 B 1 HETATM 31 C C28 POV . . . J 3 138.234 104.167 98.315 1 45.48 ? C28 POV 801 B 1 HETATM 32 C C29 POV . . . J 3 136.835 104.325 98.953 1 45.31 ? C29 POV 801 B 1 HETATM 33 C C31 POV . . . J 3 138.682 96.924 90.741 1 48.36 ? C31 POV 801 B 1 HETATM 34 O O31 POV . . . J 3 139.709 97.501 89.927 1 50.2 ? O31 POV 801 B 1 HETATM 35 C C32 POV . . . J 3 139.023 96.421 92.179 1 44.17 ? C32 POV 801 B 1 HETATM 36 O O32 POV . . . J 3 137.568 96.824 90.325 1 49.57 ? O32 POV 801 B 1 HETATM 37 C C33 POV . . . J 3 138.854 97.586 93.202 1 40.42 ? C33 POV 801 B 1 HETATM 38 C C34 POV . . . J 3 137.577 97.348 94.043 1 40.64 ? C34 POV 801 B 1 HETATM 39 C C35 POV . . . J 3 137.944 97.318 95.545 1 39.83 ? C35 POV 801 B 1 HETATM 40 C C36 POV . . . J 3 137.755 98.726 96.147 1 40.35 ? C36 POV 801 B 1 HETATM 41 C C37 POV . . . J 3 137.951 98.667 97.678 1 44.17 ? C37 POV 801 B 1 HETATM 42 C C38 POV . . . J 3 139.313 99.277 98.06 1 44.94 ? C38 POV 801 B 1 HETATM 43 C C39 POV . . . J 3 139.149 100.14 99.327 1 43.65 ? C39 POV 801 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 154 _model_server_stats.query_time_ms 924 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 43 #