data_8FFU # _model_server_result.job_id P0QGtsz-0yp4W-S_iPRuyQ _model_server_result.datetime_utc '2024-11-09 02:44:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ffu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 8FFU # _exptl.entry_id 8FFU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.02 _cell.angle_gamma 90 _cell.entry_id 8FFU _cell.length_a 61.062 _cell.length_b 158.489 _cell.length_c 73.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FFU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 H N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 218 A GLY 218 1_555 A N LLP 219 A LLP 219 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C LLP 219 A LLP 219 1_555 A N CYS 220 A CYS 220 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C GLY 218 B GLY 218 1_555 B N LLP 219 B LLP 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C LLP 219 B LLP 219 1_555 B N CYS 220 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 C C GLY 218 C GLY 218 1_555 C N LLP 219 C LLP 219 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale6 C C LLP 219 C LLP 219 1_555 C N CYS 220 C CYS 220 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 D C GLY 218 D GLY 218 1_555 D N LLP 219 D LLP 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 D C LLP 219 D LLP 219 1_555 D N CYS 220 D CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A O ALA 66 A ALA 66 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc2 A O ASP 69 A ASP 69 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc3 A O VAL 72 A VAL 72 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc4 E MG MG . A MG 401 1_555 K O HOH . A HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc5 E MG MG . A MG 401 1_555 K O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc6 E MG MG . A MG 401 1_555 K O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc7 B O ALA 66 B ALA 66 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc8 B O ASP 69 B ASP 69 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc9 B O VAL 72 B VAL 72 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc10 G MG MG . B MG 401 1_555 L O HOH . B HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc11 G MG MG . B MG 401 1_555 L O HOH . B HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc12 C O ALA 66 C ALA 66 1_555 H MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc13 C O ASP 69 C ASP 69 1_555 H MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc14 C O VAL 72 C VAL 72 1_555 H MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc15 H MG MG . C MG 401 1_555 M O HOH . C HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc16 H MG MG . C MG 401 1_555 M O HOH . C HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? metalc ? metalc17 D O ALA 66 D ALA 66 1_555 J MG MG . D MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc18 D O ASP 69 D ASP 69 1_555 J MG MG . D MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc19 D O VAL 72 D VAL 72 1_555 J MG MG . D MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc20 J MG MG . D MG 401 1_555 N O HOH . D HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8FFU _atom_sites.fract_transf_matrix[1][1] 0.016377 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000006 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG A 1 401 401 MG MG . F 4 XUR A 1 402 419 XUR HRL . G 3 MG B 1 401 401 MG MG . H 3 MG C 1 401 401 MG MG . I 4 XUR C 1 402 419 XUR HRL . J 3 MG D 1 401 401 MG MG . K 5 HOH A 1 501 5 HOH HOH . K 5 HOH A 2 502 124 HOH HOH . K 5 HOH A 3 503 53 HOH HOH . K 5 HOH A 4 504 16 HOH HOH . K 5 HOH A 5 505 67 HOH HOH . K 5 HOH A 6 506 34 HOH HOH . K 5 HOH A 7 507 17 HOH HOH . K 5 HOH A 8 508 158 HOH HOH . K 5 HOH A 9 509 15 HOH HOH . K 5 HOH A 10 510 113 HOH HOH . K 5 HOH A 11 511 52 HOH HOH . K 5 HOH A 12 512 60 HOH HOH . K 5 HOH A 13 513 94 HOH HOH . K 5 HOH A 14 514 84 HOH HOH . K 5 HOH A 15 515 4 HOH HOH . K 5 HOH A 16 516 74 HOH HOH . K 5 HOH A 17 517 78 HOH HOH . K 5 HOH A 18 518 83 HOH HOH . K 5 HOH A 19 519 59 HOH HOH . K 5 HOH A 20 520 18 HOH HOH . K 5 HOH A 21 521 10 HOH HOH . K 5 HOH A 22 522 39 HOH HOH . K 5 HOH A 23 523 86 HOH HOH . K 5 HOH A 24 524 76 HOH HOH . K 5 HOH A 25 525 40 HOH HOH . K 5 HOH A 26 526 75 HOH HOH . K 5 HOH A 27 527 162 HOH HOH . K 5 HOH A 28 528 150 HOH HOH . K 5 HOH A 29 529 95 HOH HOH . K 5 HOH A 30 530 141 HOH HOH . K 5 HOH A 31 531 120 HOH HOH . K 5 HOH A 32 532 100 HOH HOH . K 5 HOH A 33 533 45 HOH HOH . K 5 HOH A 34 534 43 HOH HOH . K 5 HOH A 35 535 65 HOH HOH . K 5 HOH A 36 536 116 HOH HOH . K 5 HOH A 37 537 44 HOH HOH . K 5 HOH A 38 538 6 HOH HOH . L 5 HOH B 1 501 164 HOH HOH . L 5 HOH B 2 502 51 HOH HOH . L 5 HOH B 3 503 148 HOH HOH . L 5 HOH B 4 504 30 HOH HOH . L 5 HOH B 5 505 3 HOH HOH . L 5 HOH B 6 506 139 HOH HOH . L 5 HOH B 7 507 93 HOH HOH . L 5 HOH B 8 508 118 HOH HOH . L 5 HOH B 9 509 70 HOH HOH . L 5 HOH B 10 510 163 HOH HOH . L 5 HOH B 11 511 19 HOH HOH . L 5 HOH B 12 512 108 HOH HOH . L 5 HOH B 13 513 153 HOH HOH . L 5 HOH B 14 514 106 HOH HOH . L 5 HOH B 15 515 73 HOH HOH . L 5 HOH B 16 516 20 HOH HOH . L 5 HOH B 17 517 29 HOH HOH . L 5 HOH B 18 518 89 HOH HOH . L 5 HOH B 19 519 110 HOH HOH . L 5 HOH B 20 520 61 HOH HOH . L 5 HOH B 21 521 130 HOH HOH . L 5 HOH B 22 522 28 HOH HOH . L 5 HOH B 23 523 66 HOH HOH . L 5 HOH B 24 524 62 HOH HOH . L 5 HOH B 25 525 46 HOH HOH . L 5 HOH B 26 526 42 HOH HOH . L 5 HOH B 27 527 105 HOH HOH . L 5 HOH B 28 528 96 HOH HOH . L 5 HOH B 29 529 135 HOH HOH . L 5 HOH B 30 530 129 HOH HOH . L 5 HOH B 31 531 41 HOH HOH . L 5 HOH B 32 532 133 HOH HOH . L 5 HOH B 33 533 114 HOH HOH . L 5 HOH B 34 534 155 HOH HOH . L 5 HOH B 35 535 47 HOH HOH . L 5 HOH B 36 536 126 HOH HOH . L 5 HOH B 37 537 145 HOH HOH . L 5 HOH B 38 538 71 HOH HOH . M 5 HOH C 1 501 23 HOH HOH . M 5 HOH C 2 502 24 HOH HOH . M 5 HOH C 3 503 2 HOH HOH . M 5 HOH C 4 504 37 HOH HOH . M 5 HOH C 5 505 77 HOH HOH . M 5 HOH C 6 506 123 HOH HOH . M 5 HOH C 7 507 112 HOH HOH . M 5 HOH C 8 508 54 HOH HOH . M 5 HOH C 9 509 131 HOH HOH . M 5 HOH C 10 510 64 HOH HOH . M 5 HOH C 11 511 98 HOH HOH . M 5 HOH C 12 512 12 HOH HOH . M 5 HOH C 13 513 80 HOH HOH . M 5 HOH C 14 514 8 HOH HOH . M 5 HOH C 15 515 132 HOH HOH . M 5 HOH C 16 516 14 HOH HOH . M 5 HOH C 17 517 27 HOH HOH . M 5 HOH C 18 518 36 HOH HOH . M 5 HOH C 19 519 11 HOH HOH . M 5 HOH C 20 520 69 HOH HOH . M 5 HOH C 21 521 87 HOH HOH . M 5 HOH C 22 522 97 HOH HOH . M 5 HOH C 23 523 134 HOH HOH . M 5 HOH C 24 524 63 HOH HOH . M 5 HOH C 25 525 82 HOH HOH . M 5 HOH C 26 526 128 HOH HOH . M 5 HOH C 27 527 25 HOH HOH . M 5 HOH C 28 528 35 HOH HOH . M 5 HOH C 29 529 103 HOH HOH . M 5 HOH C 30 530 111 HOH HOH . M 5 HOH C 31 531 26 HOH HOH . M 5 HOH C 32 532 157 HOH HOH . M 5 HOH C 33 533 48 HOH HOH . M 5 HOH C 34 534 138 HOH HOH . M 5 HOH C 35 535 115 HOH HOH . M 5 HOH C 36 536 22 HOH HOH . M 5 HOH C 37 537 122 HOH HOH . M 5 HOH C 38 538 49 HOH HOH . N 5 HOH D 1 501 1 HOH HOH . N 5 HOH D 2 502 55 HOH HOH . N 5 HOH D 3 503 104 HOH HOH . N 5 HOH D 4 504 102 HOH HOH . N 5 HOH D 5 505 125 HOH HOH . N 5 HOH D 6 506 149 HOH HOH . N 5 HOH D 7 507 90 HOH HOH . N 5 HOH D 8 508 91 HOH HOH . N 5 HOH D 9 509 31 HOH HOH . N 5 HOH D 10 510 92 HOH HOH . N 5 HOH D 11 511 99 HOH HOH . N 5 HOH D 12 512 146 HOH HOH . N 5 HOH D 13 513 137 HOH HOH . N 5 HOH D 14 514 152 HOH HOH . N 5 HOH D 15 515 143 HOH HOH . N 5 HOH D 16 516 56 HOH HOH . N 5 HOH D 17 517 81 HOH HOH . N 5 HOH D 18 518 57 HOH HOH . N 5 HOH D 19 519 147 HOH HOH . N 5 HOH D 20 520 68 HOH HOH . N 5 HOH D 21 521 13 HOH HOH . N 5 HOH D 22 522 38 HOH HOH . N 5 HOH D 23 523 109 HOH HOH . N 5 HOH D 24 524 33 HOH HOH . N 5 HOH D 25 525 32 HOH HOH . N 5 HOH D 26 526 159 HOH HOH . N 5 HOH D 27 527 79 HOH HOH . N 5 HOH D 28 528 119 HOH HOH . N 5 HOH D 29 529 7 HOH HOH . N 5 HOH D 30 530 151 HOH HOH . N 5 HOH D 31 531 9 HOH HOH . N 5 HOH D 32 532 85 HOH HOH . N 5 HOH D 33 533 21 HOH HOH . N 5 HOH D 34 534 142 HOH HOH . N 5 HOH D 35 535 140 HOH HOH . N 5 HOH D 36 536 88 HOH HOH . N 5 HOH D 37 537 101 HOH HOH . N 5 HOH D 38 538 107 HOH HOH . N 5 HOH D 39 539 58 HOH HOH . N 5 HOH D 40 540 154 HOH HOH . N 5 HOH D 41 541 127 HOH HOH . N 5 HOH D 42 542 156 HOH HOH . N 5 HOH D 43 543 136 HOH HOH . N 5 HOH D 44 544 121 HOH HOH . N 5 HOH D 45 545 144 HOH HOH . N 5 HOH D 46 546 50 HOH HOH . N 5 HOH D 47 547 160 HOH HOH . N 5 HOH D 48 548 161 HOH HOH . N 5 HOH D 49 549 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x -76.116 _atom_site.Cartn_y -29.884 _atom_site.Cartn_z -50.831 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #