data_8FGE # _model_server_result.job_id mr3IJL-z_A9jIcsGTz8A-g _model_server_result.datetime_utc '2024-11-14 08:00:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fge # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 8FGE # _exptl.entry_id 8FGE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FGE _cell.length_a 48.953 _cell.length_b 113.846 _cell.length_c 163.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FGE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -48.953 0 81.815 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 F ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc2 A SG CYS 30 A CYS 326 1_555 F ZN ZN . A ZN 805 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc3 A SG CYS 35 A CYS 331 1_555 F ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 A SG CYS 35 A CYS 331 1_555 F ZN ZN . A ZN 805 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc5 A SG CYS 119 A CYS 415 1_555 B FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 135 n y N1 C8A H4B sing 136 n y C2 N2 H4B sing 137 n n C2 N3 H4B sing 138 n y N2 HN21 H4B sing 139 n n N2 HN22 H4B sing 140 n n N3 C4 H4B sing 141 n y N3 HN3 H4B sing 142 n n C4 O4 H4B doub 143 n n C4 C4A H4B sing 144 n y C4A C8A H4B doub 145 n y C4A N5 H4B sing 146 n n C8A N8 H4B sing 147 n n N5 C6 H4B sing 148 n n N5 HN5 H4B sing 149 n n N8 C7 H4B sing 150 n n N8 HN8 H4B sing 151 n n C6 C7 H4B sing 152 n n C6 C9 H4B sing 153 n n C6 H6 H4B sing 154 n n C7 H71 H4B sing 155 n n C7 H72 H4B sing 156 n n C9 O9 H4B sing 157 n n C9 C10 H4B sing 158 n n C9 H9 H4B sing 159 n n O9 HO9 H4B sing 160 n n C10 C11 H4B sing 161 n n C10 O10 H4B sing 162 n n C10 H10 H4B sing 163 n n C11 H111 H4B sing 164 n n C11 H112 H4B sing 165 n n C11 H113 H4B sing 166 n n O10 HO0 H4B sing 167 n n # _atom_sites.entry_id 8FGE _atom_sites.fract_transf_matrix[1][1] 0.020428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008784 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 801 750 HEM HEM . C 3 H4B A 1 802 760 H4B BH4 . D 4 XVA A 1 803 800 XVA 1V6 . E 5 ACT A 1 804 860 ACT ACT . F 6 ZN A 1 805 900 ZN ZN . G 7 HOH A 1 901 70 HOH HOH . G 7 HOH A 2 902 79 HOH HOH . G 7 HOH A 3 903 68 HOH HOH . G 7 HOH A 4 904 37 HOH HOH . G 7 HOH A 5 905 80 HOH HOH . G 7 HOH A 6 906 63 HOH HOH . G 7 HOH A 7 907 53 HOH HOH . G 7 HOH A 8 908 57 HOH HOH . G 7 HOH A 9 909 1 HOH HOH . G 7 HOH A 10 910 47 HOH HOH . G 7 HOH A 11 911 75 HOH HOH . G 7 HOH A 12 912 7 HOH HOH . G 7 HOH A 13 913 71 HOH HOH . G 7 HOH A 14 914 4 HOH HOH . G 7 HOH A 15 915 81 HOH HOH . G 7 HOH A 16 916 58 HOH HOH . G 7 HOH A 17 917 48 HOH HOH . G 7 HOH A 18 918 3 HOH HOH . G 7 HOH A 19 919 64 HOH HOH . G 7 HOH A 20 920 82 HOH HOH . G 7 HOH A 21 921 32 HOH HOH . G 7 HOH A 22 922 11 HOH HOH . G 7 HOH A 23 923 38 HOH HOH . G 7 HOH A 24 924 44 HOH HOH . G 7 HOH A 25 925 23 HOH HOH . G 7 HOH A 26 926 28 HOH HOH . G 7 HOH A 27 927 20 HOH HOH . G 7 HOH A 28 928 22 HOH HOH . G 7 HOH A 29 929 12 HOH HOH . G 7 HOH A 30 930 52 HOH HOH . G 7 HOH A 31 931 30 HOH HOH . G 7 HOH A 32 932 49 HOH HOH . G 7 HOH A 33 933 74 HOH HOH . G 7 HOH A 34 934 5 HOH HOH . G 7 HOH A 35 935 27 HOH HOH . G 7 HOH A 36 936 2 HOH HOH . G 7 HOH A 37 937 35 HOH HOH . G 7 HOH A 38 938 6 HOH HOH . G 7 HOH A 39 939 24 HOH HOH . G 7 HOH A 40 940 14 HOH HOH . G 7 HOH A 41 941 73 HOH HOH . G 7 HOH A 42 942 8 HOH HOH . G 7 HOH A 43 943 50 HOH HOH . G 7 HOH A 44 944 41 HOH HOH . G 7 HOH A 45 945 45 HOH HOH . G 7 HOH A 46 946 17 HOH HOH . G 7 HOH A 47 947 13 HOH HOH . G 7 HOH A 48 948 42 HOH HOH . G 7 HOH A 49 949 60 HOH HOH . G 7 HOH A 50 950 34 HOH HOH . G 7 HOH A 51 951 46 HOH HOH . G 7 HOH A 52 952 51 HOH HOH . G 7 HOH A 53 953 21 HOH HOH . G 7 HOH A 54 954 26 HOH HOH . G 7 HOH A 55 955 16 HOH HOH . G 7 HOH A 56 956 65 HOH HOH . G 7 HOH A 57 957 72 HOH HOH . G 7 HOH A 58 958 19 HOH HOH . G 7 HOH A 59 959 40 HOH HOH . G 7 HOH A 60 960 39 HOH HOH . G 7 HOH A 61 961 18 HOH HOH . G 7 HOH A 62 962 83 HOH HOH . G 7 HOH A 63 963 78 HOH HOH . G 7 HOH A 64 964 61 HOH HOH . G 7 HOH A 65 965 15 HOH HOH . G 7 HOH A 66 966 36 HOH HOH . G 7 HOH A 67 967 59 HOH HOH . G 7 HOH A 68 968 9 HOH HOH . G 7 HOH A 69 969 76 HOH HOH . G 7 HOH A 70 970 56 HOH HOH . G 7 HOH A 71 971 67 HOH HOH . G 7 HOH A 72 972 29 HOH HOH . G 7 HOH A 73 973 43 HOH HOH . G 7 HOH A 74 974 10 HOH HOH . G 7 HOH A 75 975 69 HOH HOH . G 7 HOH A 76 976 31 HOH HOH . G 7 HOH A 77 977 54 HOH HOH . G 7 HOH A 78 978 66 HOH HOH . G 7 HOH A 79 979 55 HOH HOH . G 7 HOH A 80 980 33 HOH HOH . G 7 HOH A 81 981 77 HOH HOH . G 7 HOH A 82 982 62 HOH HOH . G 7 HOH A 83 983 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . C 3 -22.037 -3.116 33.709 1 50.29 ? N1 H4B 802 A 1 HETATM 2 C C2 H4B . . . C 3 -22.045 -2.612 32.449 1 48.82 ? C2 H4B 802 A 1 HETATM 3 N N2 H4B . . . C 3 -23.206 -2.196 31.899 1 45.96 ? N2 H4B 802 A 1 HETATM 4 N N3 H4B . . . C 3 -20.907 -2.522 31.726 1 43.1 ? N3 H4B 802 A 1 HETATM 5 C C4 H4B . . . C 3 -19.731 -2.926 32.242 1 45.45 ? C4 H4B 802 A 1 HETATM 6 O O4 H4B . . . C 3 -18.677 -2.839 31.574 1 42.99 ? O4 H4B 802 A 1 HETATM 7 C C4A H4B . . . C 3 -19.703 -3.458 33.526 1 46.53 ? C4A H4B 802 A 1 HETATM 8 C C8A H4B . . . C 3 -20.88 -3.536 34.256 1 48.61 ? C8A H4B 802 A 1 HETATM 9 N N5 H4B . . . C 3 -18.551 -3.898 34.069 1 47.1 ? N5 H4B 802 A 1 HETATM 10 N N8 H4B . . . C 3 -20.894 -4.04 35.523 1 46.34 ? N8 H4B 802 A 1 HETATM 11 C C6 H4B . . . C 3 -18.67 -4.877 35.161 1 48.16 ? C6 H4B 802 A 1 HETATM 12 C C7 H4B . . . C 3 -19.657 -4.384 36.209 1 45.95 ? C7 H4B 802 A 1 HETATM 13 C C9 H4B . . . C 3 -17.33 -5.233 35.809 1 42.89 ? C9 H4B 802 A 1 HETATM 14 O O9 H4B . . . C 3 -16.693 -4.021 36.183 1 42.73 ? O9 H4B 802 A 1 HETATM 15 C C10 H4B . . . C 3 -17.491 -6.133 37.037 1 47.39 ? C10 H4B 802 A 1 HETATM 16 C C11 H4B . . . C 3 -16.171 -6.385 37.781 1 40.11 ? C11 H4B 802 A 1 HETATM 17 O O10 H4B . . . C 3 -18.04 -7.4 36.653 1 46.7 ? O10 H4B 802 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #