data_8FHJ # _model_server_result.job_id qWGwNEJaS16vx5gIOkQ7KQ _model_server_result.datetime_utc '2024-11-30 03:06:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":603}' # _entry.id 8FHJ # _exptl.entry_id 8FHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.41 _cell.angle_gamma 90 _cell.entry_id 8FHJ _cell.length_a 148.347 _cell.length_b 96.765 _cell.length_c 135.206 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O ALA 463 B ALA 463 1_555 T NA NA . B NA 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc2 B O ARG 465 B ARG 465 1_555 T NA NA . B NA 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc3 B O ALA 468 B ALA 468 1_555 T NA NA . B NA 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc4 T NA NA . B NA 609 1_555 FA O HOH . B HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 220 n n C1 C2 GOL sing 221 n n C1 H11 GOL sing 222 n n C1 H12 GOL sing 223 n n O1 HO1 GOL sing 224 n n C2 O2 GOL sing 225 n n C2 C3 GOL sing 226 n n C2 H2 GOL sing 227 n n O2 HO2 GOL sing 228 n n C3 O3 GOL sing 229 n n C3 H31 GOL sing 230 n n C3 H32 GOL sing 231 n n O3 HO3 GOL sing 232 n n # _atom_sites.entry_id 8FHJ _atom_sites.fract_transf_matrix[1][1] 0.006741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003347 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FAD A 1 601 700 FAD FAD . E 3 GOL A 1 602 801 GOL GOL . F 3 GOL A 1 603 901 GOL GOL . G 4 BR A 1 604 4 BR BR . H 4 BR A 1 605 7 BR BR . I 4 BR A 1 606 9 BR BR . J 4 BR A 1 607 10 BR BR . K 4 BR A 1 608 13 BR BR . L 2 FAD B 1 601 700 FAD FAD . M 3 GOL B 1 602 801 GOL GOL . N 3 GOL B 1 603 901 GOL GOL . O 3 GOL B 1 604 1001 GOL GOL . P 3 GOL B 1 605 1101 GOL GOL . Q 3 GOL B 1 606 1201 GOL GOL . R 3 GOL B 1 607 1301 GOL GOL . S 3 GOL B 1 608 1401 GOL GOL . T 5 NA B 1 609 1 NA NA . U 4 BR B 1 610 2 BR BR . V 4 BR B 1 611 5 BR BR . W 4 BR B 1 612 6 BR BR . X 4 BR B 1 613 8 BR BR . Y 4 BR B 1 614 11 BR BR . Z 4 BR B 1 615 12 BR BR . AA 2 FAD C 1 601 700 FAD FAD . BA 3 GOL C 1 602 801 GOL GOL . CA 4 BR C 1 603 3 BR BR . DA 4 BR C 1 604 14 BR BR . EA 6 HOH A 1 701 39 HOH HOH . EA 6 HOH A 2 702 99 HOH HOH . EA 6 HOH A 3 703 45 HOH HOH . EA 6 HOH A 4 704 146 HOH HOH . EA 6 HOH A 5 705 153 HOH HOH . EA 6 HOH A 6 706 55 HOH HOH . EA 6 HOH A 7 707 50 HOH HOH . EA 6 HOH A 8 708 132 HOH HOH . EA 6 HOH A 9 709 57 HOH HOH . EA 6 HOH A 10 710 23 HOH HOH . EA 6 HOH A 11 711 65 HOH HOH . EA 6 HOH A 12 712 37 HOH HOH . EA 6 HOH A 13 713 22 HOH HOH . EA 6 HOH A 14 714 105 HOH HOH . EA 6 HOH A 15 715 67 HOH HOH . EA 6 HOH A 16 716 21 HOH HOH . EA 6 HOH A 17 717 147 HOH HOH . EA 6 HOH A 18 718 71 HOH HOH . EA 6 HOH A 19 719 150 HOH HOH . EA 6 HOH A 20 720 47 HOH HOH . EA 6 HOH A 21 721 95 HOH HOH . EA 6 HOH A 22 722 96 HOH HOH . EA 6 HOH A 23 723 31 HOH HOH . EA 6 HOH A 24 724 68 HOH HOH . EA 6 HOH A 25 725 19 HOH HOH . EA 6 HOH A 26 726 85 HOH HOH . EA 6 HOH A 27 727 135 HOH HOH . EA 6 HOH A 28 728 129 HOH HOH . EA 6 HOH A 29 729 143 HOH HOH . EA 6 HOH A 30 730 74 HOH HOH . EA 6 HOH A 31 731 49 HOH HOH . EA 6 HOH A 32 732 66 HOH HOH . EA 6 HOH A 33 733 35 HOH HOH . FA 6 HOH B 1 701 139 HOH HOH . FA 6 HOH B 2 702 51 HOH HOH . FA 6 HOH B 3 703 112 HOH HOH . FA 6 HOH B 4 704 111 HOH HOH . FA 6 HOH B 5 705 144 HOH HOH . FA 6 HOH B 6 706 83 HOH HOH . FA 6 HOH B 7 707 46 HOH HOH . FA 6 HOH B 8 708 100 HOH HOH . FA 6 HOH B 9 709 15 HOH HOH . FA 6 HOH B 10 710 30 HOH HOH . FA 6 HOH B 11 711 27 HOH HOH . FA 6 HOH B 12 712 136 HOH HOH . FA 6 HOH B 13 713 90 HOH HOH . FA 6 HOH B 14 714 25 HOH HOH . FA 6 HOH B 15 715 38 HOH HOH . FA 6 HOH B 16 716 149 HOH HOH . FA 6 HOH B 17 717 70 HOH HOH . FA 6 HOH B 18 718 109 HOH HOH . FA 6 HOH B 19 719 32 HOH HOH . FA 6 HOH B 20 720 115 HOH HOH . FA 6 HOH B 21 721 81 HOH HOH . FA 6 HOH B 22 722 84 HOH HOH . FA 6 HOH B 23 723 53 HOH HOH . FA 6 HOH B 24 724 116 HOH HOH . FA 6 HOH B 25 725 26 HOH HOH . FA 6 HOH B 26 726 108 HOH HOH . FA 6 HOH B 27 727 62 HOH HOH . FA 6 HOH B 28 728 60 HOH HOH . FA 6 HOH B 29 729 34 HOH HOH . FA 6 HOH B 30 730 40 HOH HOH . FA 6 HOH B 31 731 140 HOH HOH . FA 6 HOH B 32 732 80 HOH HOH . FA 6 HOH B 33 733 58 HOH HOH . FA 6 HOH B 34 734 145 HOH HOH . FA 6 HOH B 35 735 33 HOH HOH . FA 6 HOH B 36 736 148 HOH HOH . FA 6 HOH B 37 737 98 HOH HOH . FA 6 HOH B 38 738 101 HOH HOH . FA 6 HOH B 39 739 128 HOH HOH . FA 6 HOH B 40 740 44 HOH HOH . FA 6 HOH B 41 741 107 HOH HOH . FA 6 HOH B 42 742 119 HOH HOH . FA 6 HOH B 43 743 87 HOH HOH . FA 6 HOH B 44 744 20 HOH HOH . FA 6 HOH B 45 745 134 HOH HOH . FA 6 HOH B 46 746 91 HOH HOH . FA 6 HOH B 47 747 142 HOH HOH . GA 6 HOH C 1 701 133 HOH HOH . GA 6 HOH C 2 702 36 HOH HOH . GA 6 HOH C 3 703 16 HOH HOH . GA 6 HOH C 4 704 79 HOH HOH . GA 6 HOH C 5 705 137 HOH HOH . GA 6 HOH C 6 706 110 HOH HOH . GA 6 HOH C 7 707 120 HOH HOH . GA 6 HOH C 8 708 125 HOH HOH . GA 6 HOH C 9 709 61 HOH HOH . GA 6 HOH C 10 710 82 HOH HOH . GA 6 HOH C 11 711 28 HOH HOH . GA 6 HOH C 12 712 56 HOH HOH . GA 6 HOH C 13 713 64 HOH HOH . GA 6 HOH C 14 714 72 HOH HOH . GA 6 HOH C 15 715 17 HOH HOH . GA 6 HOH C 16 716 121 HOH HOH . GA 6 HOH C 17 717 151 HOH HOH . GA 6 HOH C 18 718 88 HOH HOH . GA 6 HOH C 19 719 89 HOH HOH . GA 6 HOH C 20 720 152 HOH HOH . GA 6 HOH C 21 721 154 HOH HOH . GA 6 HOH C 22 722 69 HOH HOH . GA 6 HOH C 23 723 102 HOH HOH . GA 6 HOH C 24 724 75 HOH HOH . GA 6 HOH C 25 725 52 HOH HOH . GA 6 HOH C 26 726 24 HOH HOH . GA 6 HOH C 27 727 76 HOH HOH . GA 6 HOH C 28 728 123 HOH HOH . GA 6 HOH C 29 729 78 HOH HOH . GA 6 HOH C 30 730 29 HOH HOH . GA 6 HOH C 31 731 131 HOH HOH . GA 6 HOH C 32 732 104 HOH HOH . GA 6 HOH C 33 733 77 HOH HOH . GA 6 HOH C 34 734 122 HOH HOH . GA 6 HOH C 35 735 126 HOH HOH . GA 6 HOH C 36 736 94 HOH HOH . GA 6 HOH C 37 737 93 HOH HOH . GA 6 HOH C 38 738 118 HOH HOH . GA 6 HOH C 39 739 18 HOH HOH . GA 6 HOH C 40 740 138 HOH HOH . GA 6 HOH C 41 741 114 HOH HOH . GA 6 HOH C 42 742 92 HOH HOH . GA 6 HOH C 43 743 97 HOH HOH . GA 6 HOH C 44 744 103 HOH HOH . GA 6 HOH C 45 745 124 HOH HOH . GA 6 HOH C 46 746 117 HOH HOH . GA 6 HOH C 47 747 130 HOH HOH . GA 6 HOH C 48 748 113 HOH HOH . GA 6 HOH C 49 749 86 HOH HOH . GA 6 HOH C 50 750 127 HOH HOH . GA 6 HOH C 51 751 54 HOH HOH . GA 6 HOH C 52 752 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 3 23.89 -30.009 -2.868 1 69.47 ? C1 GOL 603 A 1 HETATM 2 O O1 GOL . . . F 3 24.58 -31.114 -3.445 1 71.06 ? O1 GOL 603 A 1 HETATM 3 C C2 GOL . . . F 3 22.924 -30.552 -1.747 1 69.34 ? C2 GOL 603 A 1 HETATM 4 O O2 GOL . . . F 3 21.998 -29.576 -1.382 1 68.09 ? O2 GOL 603 A 1 HETATM 5 C C3 GOL . . . F 3 23.837 -31.008 -0.555 1 69.55 ? C3 GOL 603 A 1 HETATM 6 O O3 GOL . . . F 3 22.999 -31.501 0.468 1 69.59 ? O3 GOL 603 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #