data_8FHS # _model_server_result.job_id 6xprw544cVOpZ9iM7tXf-Q _model_server_result.datetime_utc '2024-11-21 14:16:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fhs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":2309}' # _entry.id 8FHS # _exptl.entry_id 8FHS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FHS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FHS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 M N N ? 11 O N N ? 11 P N N ? 11 Q N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 2 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 5 ? 6 3 2 NAG NAG C1 O1 . O4 HO4 . sing 6 ? 6 4 3 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 B 1 NAG D 1102 NAG 4 n D NAG 2 B 2 NAG D 1103 NAG 4 n D NAG 3 B 3 NAG D 1104 NAG 5 n E NAG 1 E 1 NAG D 1105 NAG 5 n E NAG 2 E 2 NAG D 1106 NAG 6 n F NAG 1 F 1 NAG D 1107 NAG 6 n F NAG 2 F 2 NAG D 1108 NAG 6 n F NAG 3 F 3 NAG D 1109 NAG 6 n F NAG 4 F 4 NAG D 1110 NAG 5 n G NAG 1 G 1 NAG D 1111 NAG 5 n G NAG 2 G 2 NAG D 1112 NAG 5 n H NAG 1 H 1 NAG D 1114 NAG 5 n H NAG 2 H 2 NAG D 1115 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 298 A CYS 298 1_555 A SG CYS 326 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 316 A CYS 316 1_555 A SG CYS 332 A CYS 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 1078 A CYS 1078 1_555 A SG CYS 1089 A CYS 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 1479 A CYS 1479 1_555 A SG CYS 1495 A CYS 1495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 303 D CYS 303 1_555 B SG CYS 1044 D CYS 1044 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 404 D CYS 404 1_555 B SG CYS 1071 D CYS 1071 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 B SG CYS 667 D CYS 667 1_555 B SG CYS 697 D CYS 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf8 B SG CYS 904 D CYS 904 1_555 B SG CYS 974 D CYS 974 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 996 D CYS 996 1_555 B SG CYS 1026 D CYS 1026 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 B SG CYS 999 D CYS 999 1_555 B SG CYS 1024 D CYS 1024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 B ND2 ASN 92 D ASN 92 1_555 S C1 NAG . D NAG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale2 B ND2 ASN 184 D ASN 184 1_555 D C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale3 B ND2 ASN 348 D ASN 348 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale4 B ND2 ASN 468 D ASN 468 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale5 B ND2 ASN 613 D ASN 613 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale6 B ND2 ASN 781 D ASN 781 1_555 T C1 NAG . D NAG 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale7 B ND2 ASN 895 D ASN 895 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale8 D O4 NAG . B NAG 1 1_555 D C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale9 D O4 NAG . B NAG 2 1_555 D C1 NAG . B NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale10 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale11 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale12 F O4 NAG . F NAG 2 1_555 F C1 NAG . F NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale13 F O4 NAG . F NAG 3 1_555 F C1 NAG . F NAG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale14 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale15 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? metalc ? metalc1 A OD2 ASP 151 A ASP 151 1_555 R CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc2 A OE1 GLU 363 A GLU 363 1_555 I CA CA . A CA 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc3 A OE2 GLU 363 A GLU 363 1_555 I CA CA . A CA 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? metalc ? metalc4 A OE1 GLU 706 A GLU 706 1_555 I CA CA . A CA 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc5 A OE1 GLU 1135 A GLU 1135 1_555 I CA CA . A CA 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.182 ? metalc ? metalc6 A OE2 GLU 1135 A GLU 1135 1_555 I CA CA . A CA 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc7 B OG SER 261 D SER 261 1_555 R CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? metalc ? metalc8 B OG SER 263 D SER 263 1_555 R CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc9 B OG1 THR 331 D THR 331 1_555 R CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 264 n n C1 C10 CLR sing 265 n n C1 H11 CLR sing 266 n n C1 H12 CLR sing 267 n n C2 C3 CLR sing 268 n n C2 H21 CLR sing 269 n n C2 H22 CLR sing 270 n n C3 C4 CLR sing 271 n n C3 O1 CLR sing 272 n n C3 H3 CLR sing 273 n n C4 C5 CLR sing 274 n n C4 H41 CLR sing 275 n n C4 H42 CLR sing 276 n n C5 C6 CLR doub 277 n n C5 C10 CLR sing 278 n n C6 C7 CLR sing 279 n n C6 H6 CLR sing 280 n n C7 C8 CLR sing 281 n n C7 H71 CLR sing 282 n n C7 H72 CLR sing 283 n n C8 C9 CLR sing 284 n n C8 C14 CLR sing 285 n n C8 H8 CLR sing 286 n n C9 C10 CLR sing 287 n n C9 C11 CLR sing 288 n n C9 H9 CLR sing 289 n n C10 C19 CLR sing 290 n n C11 C12 CLR sing 291 n n C11 H111 CLR sing 292 n n C11 H112 CLR sing 293 n n C12 C13 CLR sing 294 n n C12 H121 CLR sing 295 n n C12 H122 CLR sing 296 n n C13 C14 CLR sing 297 n n C13 C17 CLR sing 298 n n C13 C18 CLR sing 299 n n C14 C15 CLR sing 300 n n C14 H14 CLR sing 301 n n C15 C16 CLR sing 302 n n C15 H151 CLR sing 303 n n C15 H152 CLR sing 304 n n C16 C17 CLR sing 305 n n C16 H161 CLR sing 306 n n C16 H162 CLR sing 307 n n C17 C20 CLR sing 308 n n C17 H17 CLR sing 309 n n C18 H181 CLR sing 310 n n C18 H182 CLR sing 311 n n C18 H183 CLR sing 312 n n C19 H191 CLR sing 313 n n C19 H192 CLR sing 314 n n C19 H193 CLR sing 315 n n C20 C21 CLR sing 316 n n C20 C22 CLR sing 317 n n C20 H20 CLR sing 318 n n C21 H211 CLR sing 319 n n C21 H212 CLR sing 320 n n C21 H213 CLR sing 321 n n C22 C23 CLR sing 322 n n C22 H221 CLR sing 323 n n C22 H222 CLR sing 324 n n C23 C24 CLR sing 325 n n C23 H231 CLR sing 326 n n C23 H232 CLR sing 327 n n C24 C25 CLR sing 328 n n C24 H241 CLR sing 329 n n C24 H242 CLR sing 330 n n C25 C26 CLR sing 331 n n C25 C27 CLR sing 332 n n C25 H25 CLR sing 333 n n C26 H261 CLR sing 334 n n C26 H262 CLR sing 335 n n C26 H263 CLR sing 336 n n C27 H271 CLR sing 337 n n C27 H272 CLR sing 338 n n C27 H273 CLR sing 339 n n O1 H1 CLR sing 340 n n # _atom_sites.entry_id 8FHS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 7 CA A 1 2301 1701 CA CA . J 8 BBI A 1 2302 1703 BBI IAK . K 9 WG6 A 1 2303 1704 WG6 SOF . L 10 3PE A 1 2304 1705 3PE 3PE . M 11 CLR A 1 2305 1706 CLR CLR . N 10 3PE A 1 2306 1707 3PE 3PE . O 11 CLR A 1 2307 1708 CLR CLR . P 11 CLR A 1 2308 1709 CLR CLR . Q 11 CLR A 1 2309 1710 CLR CLR . R 7 CA D 1 1201 1702 CA CA . S 12 NAG D 1 1202 1101 NAG NAG . T 12 NAG D 1 1203 1113 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . Q 11 165.702 125.597 145.963 1 33.46 ? C1 CLR 2309 A 1 HETATM 2 C C2 CLR . . . Q 11 166.332 124.934 147.181 1 35.38 ? C2 CLR 2309 A 1 HETATM 3 C C3 CLR . . . Q 11 165.968 125.688 148.443 1 35.31 ? C3 CLR 2309 A 1 HETATM 4 C C4 CLR . . . Q 11 164.45 125.745 148.585 1 34.16 ? C4 CLR 2309 A 1 HETATM 5 C C5 CLR . . . Q 11 163.784 126.311 147.358 1 33.53 ? C5 CLR 2309 A 1 HETATM 6 C C6 CLR . . . Q 11 162.897 127.298 147.47 1 37.34 ? C6 CLR 2309 A 1 HETATM 7 C C7 CLR . . . Q 11 162.166 127.918 146.329 1 32.38 ? C7 CLR 2309 A 1 HETATM 8 C C8 CLR . . . Q 11 162.226 127.055 145.074 1 30.19 ? C8 CLR 2309 A 1 HETATM 9 C C9 CLR . . . Q 11 163.66 126.558 144.851 1 30.32 ? C9 CLR 2309 A 1 HETATM 10 C C10 CLR . . . Q 11 164.163 125.684 146.028 1 30.05 ? C10 CLR 2309 A 1 HETATM 11 C C11 CLR . . . Q 11 163.802 125.87 143.49 1 37.69 ? C11 CLR 2309 A 1 HETATM 12 C C12 CLR . . . Q 11 163.223 126.664 142.317 1 36.9 ? C12 CLR 2309 A 1 HETATM 13 C C13 CLR . . . Q 11 161.76 127.057 142.542 1 33.73 ? C13 CLR 2309 A 1 HETATM 14 C C14 CLR . . . Q 11 161.753 127.839 143.863 1 32.72 ? C14 CLR 2309 A 1 HETATM 15 C C15 CLR . . . Q 11 160.377 128.482 143.922 1 35.9 ? C15 CLR 2309 A 1 HETATM 16 C C16 CLR . . . Q 11 160.09 128.835 142.452 1 37.94 ? C16 CLR 2309 A 1 HETATM 17 C C17 CLR . . . Q 11 161.161 128.122 141.58 1 33.18 ? C17 CLR 2309 A 1 HETATM 18 C C18 CLR . . . Q 11 160.852 125.824 142.612 1 33.86 ? C18 CLR 2309 A 1 HETATM 19 C C19 CLR . . . Q 11 163.57 124.269 145.978 1 33.4 ? C19 CLR 2309 A 1 HETATM 20 C C20 CLR . . . Q 11 160.567 127.739 140.213 1 35.27 ? C20 CLR 2309 A 1 HETATM 21 C C21 CLR . . . Q 11 161.504 126.964 139.289 1 36.66 ? C21 CLR 2309 A 1 HETATM 22 C C22 CLR . . . Q 11 160.107 129.021 139.507 1 35.92 ? C22 CLR 2309 A 1 HETATM 23 C C23 CLR . . . Q 11 161.22 130.017 139.199 1 34.16 ? C23 CLR 2309 A 1 HETATM 24 C C24 CLR . . . Q 11 161.269 130.388 137.722 1 35.13 ? C24 CLR 2309 A 1 HETATM 25 C C25 CLR . . . Q 11 160.137 131.298 137.246 1 38.35 ? C25 CLR 2309 A 1 HETATM 26 C C26 CLR . . . Q 11 160.102 132.565 138.091 1 39.66 ? C26 CLR 2309 A 1 HETATM 27 C C27 CLR . . . Q 11 160.266 131.656 135.769 1 35.07 ? C27 CLR 2309 A 1 HETATM 28 O O1 CLR . . . Q 11 166.58 125.046 149.542 1 34.51 ? O1 CLR 2309 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 119 _model_server_stats.query_time_ms 590 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #