data_8FIW # _model_server_result.job_id g7L7EISIHj3a4x59egqlxg _model_server_result.datetime_utc '2025-04-27 07:49:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fiw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8FIW # _exptl.entry_id 8FIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 461.554 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-([1,1'-biphenyl]-4-yl)-N-[(1R)-2-oxo-2-{[(1S)-1-phenylethyl]amino}-1-(pyridin-3-yl)ethyl]prop-2-enamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.67 _cell.angle_gamma 90 _cell.entry_id 8FIW _cell.length_a 45.16 _cell.length_b 53.355 _cell.length_c 114.462 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 145 A CYS 145 1_555 C C35 Y0E . A Y0E 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.632 ? covale ? covale2 B SG CYS 145 B CYS 145 1_555 D C35 Y0E . B Y0E 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.63 ? covale ? covale3 B SG CYS 145 B CYS 145 1_555 E C35 Y1E . B Y1E 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.623 ? # _chem_comp.formula 'C30 H27 N3 O2' _chem_comp.formula_weight 461.554 _chem_comp.id Y0E _chem_comp.mon_nstd_flag . _chem_comp.name "N-([1,1'-biphenyl]-4-yl)-N-[(1R)-2-oxo-2-{[(1S)-1-phenylethyl]amino}-1-(pyridin-3-yl)ethyl]prop-2-enamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C19 Y0E doub 374 n y C20 C21 Y0E sing 375 n y C19 N18 Y0E sing 376 n y C21 C16 Y0E doub 377 n y N18 C17 Y0E doub 378 n y O01 C02 Y0E doub 379 n n C16 C17 Y0E sing 380 n y C16 C04 Y0E sing 381 n n C02 C34 Y0E sing 382 n n C02 N03 Y0E sing 383 n n C04 N03 Y0E sing 384 n n C04 C05 Y0E sing 385 n n C34 C35 Y0E doub 386 n n N03 C22 Y0E sing 387 n n C05 N06 Y0E sing 388 n n C05 O15 Y0E doub 389 n n N06 C07 Y0E sing 390 n n C22 C23 Y0E doub 391 n y C22 C33 Y0E sing 392 n y C23 C24 Y0E sing 393 n y C08 C07 Y0E sing 394 n n C07 C09 Y0E sing 395 n n C33 C32 Y0E doub 396 n y C24 C25 Y0E doub 397 n y C09 C10 Y0E doub 398 n y C09 C14 Y0E sing 399 n y C32 C25 Y0E sing 400 n y C10 C11 Y0E sing 401 n y C25 C26 Y0E sing 402 n n C14 C13 Y0E doub 403 n y C11 C12 Y0E doub 404 n y C26 C31 Y0E doub 405 n y C26 C27 Y0E sing 406 n y C31 C30 Y0E sing 407 n y C13 C12 Y0E sing 408 n y C30 C29 Y0E doub 409 n y C27 C28 Y0E doub 410 n y C29 C28 Y0E sing 411 n y C10 H1 Y0E sing 412 n n C13 H2 Y0E sing 413 n n C17 H3 Y0E sing 414 n n C20 H4 Y0E sing 415 n n C21 H5 Y0E sing 416 n n C24 H6 Y0E sing 417 n n C28 H7 Y0E sing 418 n n C04 H8 Y0E sing 419 n n N06 H9 Y0E sing 420 n n C07 H10 Y0E sing 421 n n C08 H11 Y0E sing 422 n n C08 H12 Y0E sing 423 n n C08 H13 Y0E sing 424 n n C11 H14 Y0E sing 425 n n C12 H15 Y0E sing 426 n n C14 H16 Y0E sing 427 n n C19 H17 Y0E sing 428 n n C23 H18 Y0E sing 429 n n C27 H19 Y0E sing 430 n n C29 H20 Y0E sing 431 n n C30 H21 Y0E sing 432 n n C31 H22 Y0E sing 433 n n C32 H23 Y0E sing 434 n n C33 H24 Y0E sing 435 n n C34 H25 Y0E sing 436 n n C35 H26 Y0E sing 437 n n C35 H27 Y0E sing 438 n n # _atom_sites.entry_id 8FIW _atom_sites.fract_transf_matrix[1][1] 0.022143 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004173 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018742 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y0E A 1 401 401 Y0E LIG . D 2 Y0E B 1 401 401 Y0E Y0E . E 3 Y1E B 1 402 402 Y1E LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 Y0E . . . C 2 17.169 -1.49 43.658 1 95.86 ? C10 Y0E 401 A 1 HETATM 2 C C13 Y0E . . . C 2 15.919 -2.346 45.989 1 104.48 ? C13 Y0E 401 A 1 HETATM 3 C C17 Y0E . . . C 2 12.482 -0.286 38.831 1 82.29 ? C17 Y0E 401 A 1 HETATM 4 C C20 Y0E . . . C 2 12.915 -2.146 36.881 1 92.48 ? C20 Y0E 401 A 1 HETATM 5 C C21 Y0E . . . C 2 13.986 -1.764 37.683 1 88.93 ? C21 Y0E 401 A 1 HETATM 6 C C22 Y0E . . . C 2 15.444 1.345 41.312 1 77.07 ? C22 Y0E 401 A 1 HETATM 7 C C24 Y0E . . . C 2 17.296 1.975 42.663 1 78.23 ? C24 Y0E 401 A 1 HETATM 8 C C26 Y0E . . . C 2 17.067 2.52 45.112 1 74.54 ? C26 Y0E 401 A 1 HETATM 9 C C28 Y0E . . . C 2 17.064 2.574 47.521 1 69.25 ? C28 Y0E 401 A 1 HETATM 10 O O01 Y0E . . . C 2 14.258 2.032 38.062 1 89.19 ? O01 Y0E 401 A 1 HETATM 11 C C02 Y0E . . . C 2 14.651 2.142 39.159 1 77.2 ? C02 Y0E 401 A 1 HETATM 12 N N03 Y0E . . . C 2 14.969 1.001 39.998 1 81.53 ? N03 Y0E 401 A 1 HETATM 13 C C04 Y0E . . . C 2 14.885 -0.385 39.593 1 87.43 ? C04 Y0E 401 A 1 HETATM 14 C C05 Y0E . . . C 2 14.83 -1.343 40.776 1 91.96 ? C05 Y0E 401 A 1 HETATM 15 N N06 Y0E . . . C 2 15.948 -2.209 41.135 1 93.35 ? N06 Y0E 401 A 1 HETATM 16 C C07 Y0E . . . C 2 15.787 -3.11 42.27 1 92.92 ? C07 Y0E 401 A 1 HETATM 17 C C08 Y0E . . . C 2 16.566 -4.391 42.025 1 95.22 ? C08 Y0E 401 A 1 HETATM 18 C C09 Y0E . . . C 2 16.201 -2.478 43.599 1 96.43 ? C09 Y0E 401 A 1 HETATM 19 C C11 Y0E . . . C 2 17.513 -0.93 44.879 1 95.94 ? C11 Y0E 401 A 1 HETATM 20 C C12 Y0E . . . C 2 16.893 -1.358 46.039 1 100.36 ? C12 Y0E 401 A 1 HETATM 21 C C14 Y0E . . . C 2 15.572 -2.905 44.767 1 103.44 ? C14 Y0E 401 A 1 HETATM 22 O O15 Y0E . . . C 2 13.821 -1.383 41.415 1 88.74 ? O15 Y0E 401 A 1 HETATM 23 C C16 Y0E . . . C 2 13.761 -0.803 38.656 1 83.99 ? C16 Y0E 401 A 1 HETATM 24 N N18 Y0E . . . C 2 11.484 -0.661 38.055 1 89.43 ? N18 Y0E 401 A 1 HETATM 25 C C19 Y0E . . . C 2 11.669 -1.564 37.102 1 95.26 ? C19 Y0E 401 A 1 HETATM 26 C C23 Y0E . . . C 2 16.788 1.608 41.436 1 78.81 ? C23 Y0E 401 A 1 HETATM 27 C C25 Y0E . . . C 2 16.461 2.087 43.769 1 72.12 ? C25 Y0E 401 A 1 HETATM 28 C C27 Y0E . . . C 2 16.499 2.155 46.331 1 73.34 ? C27 Y0E 401 A 1 HETATM 29 C C29 Y0E . . . C 2 18.197 3.357 47.518 1 68.43 ? C29 Y0E 401 A 1 HETATM 30 C C30 Y0E . . . C 2 18.761 3.722 46.315 1 72.69 ? C30 Y0E 401 A 1 HETATM 31 C C31 Y0E . . . C 2 18.203 3.327 45.12 1 71.25 ? C31 Y0E 401 A 1 HETATM 32 C C32 Y0E . . . C 2 15.1 1.837 43.629 1 71.27 ? C32 Y0E 401 A 1 HETATM 33 C C33 Y0E . . . C 2 14.594 1.469 42.399 1 75.11 ? C33 Y0E 401 A 1 HETATM 34 C C34 Y0E . . . C 2 14.776 3.553 39.698 1 73.6 ? C34 Y0E 401 A 1 HETATM 35 C C35 Y0E . . . C 2 13.677 4.278 39.723 1 74.32 ? C35 Y0E 401 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #