data_8FJ4
#
_model_server_result.job_id            Rj6bryfDloHinQaqah69yw 
_model_server_result.datetime_utc      '2025-07-15 02:07:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fj4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1402}' 
#
_entry.id    8FJ4 
#
_exptl.entry_id    8FJ4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.401 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-[(1R,2S)-2-(cyclobutylamino)cyclopropyl]-N-phenylbenzamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FJ4 
_cell.length_a            118.346 
_cell.length_b            179.743 
_cell.length_c            232.329 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FJ4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C20 H22 N2 O' 
_chem_comp.formula_weight    306.401 
_chem_comp.id                XZU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-[(1R,2S)-2-(cyclobutylamino)cyclopropyl]-N-phenylbenzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C11 C10 XZU doub 502 n y 
C11 C12 XZU sing 503 n y 
C10 C9 XZU sing 504 n y 
C14 C13 XZU sing 505 n n 
C14 C15 XZU sing 506 n n 
C13 C12 XZU sing 507 n n 
C13 C15 XZU sing 508 n n 
C12 C20 XZU doub 509 n y 
C9 C8 XZU doub 510 n y 
C15 N2 XZU sing 511 n n 
N2 C16 XZU sing 512 n n 
C20 C8 XZU sing 513 n y 
C8 C1 XZU sing 514 n n 
C18 C17 XZU sing 515 n n 
C18 C19 XZU sing 516 n n 
C17 C16 XZU sing 517 n n 
C16 C19 XZU sing 518 n n 
C1 O1 XZU doub 519 n n 
C1 N1 XZU sing 520 n n 
N1 C2 XZU sing 521 n n 
C7 C2 XZU doub 522 n y 
C7 C6 XZU sing 523 n y 
C2 C3 XZU sing 524 n y 
C6 C5 XZU doub 525 n y 
C3 C4 XZU doub 526 n y 
C5 C4 XZU sing 527 n y 
C4 H1 XZU sing 528 n n 
C14 H2 XZU sing 529 n n 
C14 H3 XZU sing 530 n n 
C5 H4 XZU sing 531 n n 
C6 H5 XZU sing 532 n n 
C11 H6 XZU sing 533 n n 
C7 H7 XZU sing 534 n n 
C9 H8 XZU sing 535 n n 
C10 H9 XZU sing 536 n n 
C13 H10 XZU sing 537 n n 
N1 H11 XZU sing 538 n n 
N2 H12 XZU sing 539 n n 
C3 H14 XZU sing 540 n n 
C15 H15 XZU sing 541 n n 
C16 H16 XZU sing 542 n n 
C17 H17 XZU sing 543 n n 
C17 H18 XZU sing 544 n n 
C18 H19 XZU sing 545 n n 
C18 H20 XZU sing 546 n n 
C19 H21 XZU sing 547 n n 
C19 H22 XZU sing 548 n n 
C20 H23 XZU sing 549 n n 
#
_atom_sites.entry_id                     8FJ4 
_atom_sites.fract_transf_matrix[1][1]    0.00845 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005563 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004304 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 XZU A 1 1401 1401 XZU DRG . 
D 3 XZU A 1 1402 1501 XZU DRG . 
E 3 XZU A 1 1403 1601 XZU DRG . 
F 4 XZQ A 1 1404 1701 XZQ DRB . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 XZU . . . D 3 -6.582 49.022 77.033 1 79.78 ? C4 XZU 1402 A 1 
HETATM 2 C C14 XZU . . . D 3 -1.178 48.867 83.126 1 90.71 ? C14 XZU 1402 A 1 
HETATM 3 C C5 XZU . . . D 3 -6.364 49.597 75.8 1 80.4 ? C5 XZU 1402 A 1 
HETATM 4 C C6 XZU . . . D 3 -5.074 49.801 75.358 1 83.37 ? C6 XZU 1402 A 1 
HETATM 5 C C11 XZU . . . D 3 0.477 46.207 80.875 1 85.25 ? C11 XZU 1402 A 1 
HETATM 6 C C7 XZU . . . D 3 -3.995 49.434 76.148 1 82.67 ? C7 XZU 1402 A 1 
HETATM 7 C C8 XZU . . . D 3 -1.096 47.419 78.947 1 81.25 ? C8 XZU 1402 A 1 
HETATM 8 C C9 XZU . . . D 3 -0.219 46.4 78.593 1 83.25 ? C9 XZU 1402 A 1 
HETATM 9 C C10 XZU . . . D 3 0.56 45.791 79.555 1 84.68 ? C10 XZU 1402 A 1 
HETATM 10 C C12 XZU . . . D 3 -0.388 47.223 81.247 1 84.24 ? C12 XZU 1402 A 1 
HETATM 11 C C13 XZU . . . D 3 -0.441 47.641 82.675 1 86.84 ? C13 XZU 1402 A 1 
HETATM 12 N N1 XZU . . . D 3 -3.152 48.453 78.233 1 77.35 ? N1 XZU 1402 A 1 
HETATM 13 N N2 XZU . . . D 3 -1.558 47.081 84.837 1 92.96 ? N2 XZU 1402 A 1 
HETATM 14 C C3 XZU . . . D 3 -5.513 48.647 77.833 1 78.59 ? C3 XZU 1402 A 1 
HETATM 15 C C1 XZU . . . D 3 -1.912 48.055 77.867 1 80.65 ? C1 XZU 1402 A 1 
HETATM 16 C C15 XZU . . . D 3 -1.719 47.508 83.478 1 88.62 ? C15 XZU 1402 A 1 
HETATM 17 C C16 XZU . . . D 3 -2.281 45.832 84.946 1 87.75 ? C16 XZU 1402 A 1 
HETATM 18 C C17 XZU . . . D 3 -1.861 44.651 84.067 1 93.7 ? C17 XZU 1402 A 1 
HETATM 19 C C18 XZU . . . D 3 -2.407 43.758 85.194 1 97.74 ? C18 XZU 1402 A 1 
HETATM 20 C C19 XZU . . . D 3 -2.07 44.908 86.153 1 90.25 ? C19 XZU 1402 A 1 
HETATM 21 C C2 XZU . . . D 3 -4.214 48.843 77.387 1 79.36 ? C2 XZU 1402 A 1 
HETATM 22 C C20 XZU . . . D 3 -1.173 47.833 80.272 1 77.21 ? C20 XZU 1402 A 1 
HETATM 23 O O1 XZU . . . D 3 -1.488 48.102 76.717 1 82.86 ? O1 XZU 1402 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#