data_8FJV # _model_server_result.job_id yQQUTQ1lj-NPxifgLTezbA _model_server_result.datetime_utc '2024-10-10 13:30:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fjv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1102}' # _entry.id 8FJV # _exptl.entry_id 8FJV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 479.482 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-{4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-3-fluorothiophene-2-carbonyl}-L-glutamic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8FJV _cell.length_a 74.943 _cell.length_b 74.943 _cell.length_c 101.015 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FJV _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H22 F N5 O6 S' _chem_comp.formula_weight 479.482 _chem_comp.id Y72 _chem_comp.mon_nstd_flag . _chem_comp.name 'N-{4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-3-fluorothiophene-2-carbonyl}-L-glutamic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O27 C26 Y72 doub 407 n n O18 C17 Y72 doub 408 n n S14 C13 Y72 sing 409 n y S14 C15 Y72 sing 410 n y O10 C04 Y72 doub 411 n n N03 C04 Y72 sing 412 n n N03 C02 Y72 sing 413 n n N11 C02 Y72 sing 414 n n C17 C13 Y72 sing 415 n n C17 N19 Y72 sing 416 n n C21 C20 Y72 sing 417 n n C21 C22 Y72 sing 418 n n C13 C12 Y72 doub 419 n y C15 C16 Y72 doub 420 n y C26 C20 Y72 sing 421 n n C26 O28 Y72 sing 422 n n C04 C08 Y72 sing 423 n n C02 N01 Y72 doub 424 n n C20 N19 Y72 sing 425 n n C22 C23 Y72 sing 426 n n C16 C12 Y72 sing 427 n y C16 C32 Y72 sing 428 n n C12 F33 Y72 sing 429 n n C08 C09 Y72 doub 430 n y C08 N05 Y72 sing 431 n y C31 C32 Y72 sing 432 n n C31 C30 Y72 sing 433 n n N01 C09 Y72 sing 434 n n C23 O25 Y72 doub 435 n n C23 O24 Y72 sing 436 n n C29 C30 Y72 sing 437 n n C29 N05 Y72 sing 438 n n C09 C07 Y72 sing 439 n y N05 C06 Y72 sing 440 n y C07 C06 Y72 doub 441 n y C15 H1 Y72 sing 442 n n C20 H2 Y72 sing 443 n n C06 H3 Y72 sing 444 n n C07 H4 Y72 sing 445 n n C21 H5 Y72 sing 446 n n C21 H6 Y72 sing 447 n n C22 H7 Y72 sing 448 n n C22 H8 Y72 sing 449 n n C29 H9 Y72 sing 450 n n C29 H10 Y72 sing 451 n n C30 H11 Y72 sing 452 n n C30 H12 Y72 sing 453 n n C31 H13 Y72 sing 454 n n C31 H14 Y72 sing 455 n n C32 H15 Y72 sing 456 n n C32 H16 Y72 sing 457 n n N03 H17 Y72 sing 458 n n N11 H18 Y72 sing 459 n n N11 H19 Y72 sing 460 n n N19 H20 Y72 sing 461 n n O24 H21 Y72 sing 462 n n O28 H22 Y72 sing 463 n n # _atom_sites.entry_id 8FJV _atom_sites.fract_transf_matrix[1][1] 0.013343 _atom_sites.fract_transf_matrix[1][2] 0.007704 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0099 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAR A 1 1101 1101 GAR GAR . C 3 Y72 A 1 1102 1201 Y72 G62 . D 4 HOH A 1 1201 34 HOH HOH . D 4 HOH A 2 1202 16 HOH HOH . D 4 HOH A 3 1203 10 HOH HOH . D 4 HOH A 4 1204 9 HOH HOH . D 4 HOH A 5 1205 7 HOH HOH . D 4 HOH A 6 1206 40 HOH HOH . D 4 HOH A 7 1207 19 HOH HOH . D 4 HOH A 8 1208 27 HOH HOH . D 4 HOH A 9 1209 39 HOH HOH . D 4 HOH A 10 1210 36 HOH HOH . D 4 HOH A 11 1211 4 HOH HOH . D 4 HOH A 12 1212 5 HOH HOH . D 4 HOH A 13 1213 17 HOH HOH . D 4 HOH A 14 1214 26 HOH HOH . D 4 HOH A 15 1215 2 HOH HOH . D 4 HOH A 16 1216 8 HOH HOH . D 4 HOH A 17 1217 33 HOH HOH . D 4 HOH A 18 1218 37 HOH HOH . D 4 HOH A 19 1219 24 HOH HOH . D 4 HOH A 20 1220 6 HOH HOH . D 4 HOH A 21 1221 22 HOH HOH . D 4 HOH A 22 1222 3 HOH HOH . D 4 HOH A 23 1223 1 HOH HOH . D 4 HOH A 24 1224 23 HOH HOH . D 4 HOH A 25 1225 14 HOH HOH . D 4 HOH A 26 1226 30 HOH HOH . D 4 HOH A 27 1227 11 HOH HOH . D 4 HOH A 28 1228 18 HOH HOH . D 4 HOH A 29 1229 15 HOH HOH . D 4 HOH A 30 1230 38 HOH HOH . D 4 HOH A 31 1231 13 HOH HOH . D 4 HOH A 32 1232 21 HOH HOH . D 4 HOH A 33 1233 32 HOH HOH . D 4 HOH A 34 1234 31 HOH HOH . D 4 HOH A 35 1235 20 HOH HOH . D 4 HOH A 36 1236 35 HOH HOH . D 4 HOH A 37 1237 25 HOH HOH . D 4 HOH A 38 1238 12 HOH HOH . D 4 HOH A 39 1239 29 HOH HOH . D 4 HOH A 40 1240 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 Y72 . . . C 3 24.892 -12.851 -16.953 0.96 99.72 ? C15 Y72 1102 A 1 HETATM 2 C C17 Y72 . . . C 3 25.86 -9.209 -15.402 0.96 98.19 ? C17 Y72 1102 A 1 HETATM 3 C C20 Y72 . . . C 3 27.037 -6.978 -15.335 0.96 102.17 ? C20 Y72 1102 A 1 HETATM 4 C C16 Y72 . . . C 3 26.285 -12.681 -16.984 0.96 95.95 ? C16 Y72 1102 A 1 HETATM 5 C C09 Y72 . . . C 3 26.635 -10.808 -22.982 0.96 80.46 ? C09 Y72 1102 A 1 HETATM 6 C C06 Y72 . . . C 3 28.181 -11.771 -21.617 0.96 69.44 ? C06 Y72 1102 A 1 HETATM 7 O O18 Y72 . . . C 3 25.148 -8.876 -14.525 0.96 105.15 ? O18 Y72 1102 A 1 HETATM 8 C C12 Y72 . . . C 3 26.735 -11.426 -16.46 0.96 97.83 ? C12 Y72 1102 A 1 HETATM 9 C C04 Y72 . . . C 3 25.059 -12.615 -23.23 0.96 78.58 ? C04 Y72 1102 A 1 HETATM 10 C C02 Y72 . . . C 3 24.717 -10.58 -24.283 0.96 77.25 ? C02 Y72 1102 A 1 HETATM 11 C C07 Y72 . . . C 3 27.87 -10.592 -22.296 0.96 79.14 ? C07 Y72 1102 A 1 HETATM 12 C C08 Y72 . . . C 3 26.272 -12.1 -22.678 0.96 79.17 ? C08 Y72 1102 A 1 HETATM 13 C C13 Y72 . . . C 3 25.699 -10.601 -16.006 0.96 99.58 ? C13 Y72 1102 A 1 HETATM 14 C C21 Y72 . . . C 3 28.442 -6.859 -14.77 0.96 103.98 ? C21 Y72 1102 A 1 HETATM 15 C C22 Y72 . . . C 3 28.636 -7.634 -13.474 0.96 105.63 ? C22 Y72 1102 A 1 HETATM 16 C C23 Y72 . . . C 3 30.088 -7.529 -13.024 0.96 111.53 ? C23 Y72 1102 A 1 HETATM 17 C C26 Y72 . . . C 3 26.907 -5.909 -16.414 0.96 113.6 ? C26 Y72 1102 A 1 HETATM 18 C C29 Y72 . . . C 3 27.132 -13.986 -21.355 0.96 69.86 ? C29 Y72 1102 A 1 HETATM 19 C C30 Y72 . . . C 3 26.554 -13.93 -19.948 0.96 74.87 ? C30 Y72 1102 A 1 HETATM 20 C C31 Y72 . . . C 3 27.622 -13.436 -18.976 0.96 82.5 ? C31 Y72 1102 A 1 HETATM 21 C C32 Y72 . . . C 3 27.24 -13.731 -17.531 0.96 89.89 ? C32 Y72 1102 A 1 HETATM 22 F F33 Y72 . . . C 3 28.041 -11.041 -16.386 0.96 94.67 ? F33 Y72 1102 A 1 HETATM 23 N N01 Y72 . . . C 3 25.835 -10.06 -23.79 0.96 75.67 ? N01 Y72 1102 A 1 HETATM 24 N N03 Y72 . . . C 3 24.321 -11.83 -24.021 0.96 77 ? N03 Y72 1102 A 1 HETATM 25 N N05 Y72 . . . C 3 27.216 -12.637 -21.867 0.96 70.53 ? N05 Y72 1102 A 1 HETATM 26 N N11 Y72 . . . C 3 23.897 -9.747 -25.138 0.96 81.23 ? N11 Y72 1102 A 1 HETATM 27 N N19 Y72 . . . C 3 26.878 -8.302 -15.903 0.96 96.57 ? N19 Y72 1102 A 1 HETATM 28 O O10 Y72 . . . C 3 24.672 -13.933 -22.93 0.96 72.03 ? O10 Y72 1102 A 1 HETATM 29 O O24 Y72 . . . C 3 30.616 -8.511 -12.18 0.96 112.58 ? O24 Y72 1102 A 1 HETATM 30 O O25 Y72 . . . C 3 30.881 -6.457 -13.468 0.96 113.63 ? O25 Y72 1102 A 1 HETATM 31 O O27 Y72 . . . C 3 27.799 -5.903 -17.494 0.96 113.9 ? O27 Y72 1102 A 1 HETATM 32 O O28 Y72 . . . C 3 25.908 -4.925 -16.313 0.96 119.49 ? O28 Y72 1102 A 1 HETATM 33 S S14 Y72 . . . C 3 24.257 -11.44 -16.267 0.96 102.14 ? S14 Y72 1102 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #