data_8FJW # _model_server_result.job_id n2J554v4QAVVSk8PJoeajA _model_server_result.datetime_utc '2024-11-23 16:10:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fjw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1102}' # _entry.id 8FJW # _exptl.entry_id 8FJW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 473.454 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-{4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-2-fluorobenzoyl}-L-glutamic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8FJW _cell.length_a 74.368 _cell.length_b 74.368 _cell.length_c 100.336 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FJW _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H24 F N5 O6' _chem_comp.formula_weight 473.454 _chem_comp.id Y79 _chem_comp.mon_nstd_flag . _chem_comp.name 'N-{4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-2-fluorobenzoyl}-L-glutamic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C23 Y79 doub 407 n n O24 C23 Y79 sing 408 n n C23 C22 Y79 sing 409 n n C22 C21 Y79 sing 410 n n C21 C20 Y79 sing 411 n n N19 C20 Y79 sing 412 n n N19 C17 Y79 sing 413 n n C20 C26 Y79 sing 414 n n O27 C26 Y79 doub 415 n n C26 O28 Y79 sing 416 n n O18 C17 Y79 doub 417 n n C17 C12 Y79 sing 418 n n C12 C14 Y79 doub 419 n y C12 C13 Y79 sing 420 n y F34 C13 Y79 sing 421 n n C14 C16 Y79 sing 422 n y C13 C15 Y79 doub 423 n y C16 C33 Y79 doub 424 n y C15 C33 Y79 sing 425 n y C33 C32 Y79 sing 426 n n C32 C31 Y79 sing 427 n n C31 C30 Y79 sing 428 n n O10 C4 Y79 doub 429 n n N3 C4 Y79 sing 430 n n N3 C2 Y79 sing 431 n n N11 C2 Y79 sing 432 n n C4 C8 Y79 sing 433 n n C2 N1 Y79 doub 434 n n C30 C29 Y79 sing 435 n n C8 C9 Y79 doub 436 n y C8 N7 Y79 sing 437 n y N1 C9 Y79 sing 438 n n C29 N7 Y79 sing 439 n n C9 C5 Y79 sing 440 n y N7 C6 Y79 sing 441 n y C5 C6 Y79 doub 442 n y C5 H1 Y79 sing 443 n n C6 H2 Y79 sing 444 n n C14 H3 Y79 sing 445 n n C15 H4 Y79 sing 446 n n C16 H5 Y79 sing 447 n n C20 H6 Y79 sing 448 n n C21 H7 Y79 sing 449 n n C21 H8 Y79 sing 450 n n C22 H9 Y79 sing 451 n n C22 H10 Y79 sing 452 n n C29 H11 Y79 sing 453 n n C29 H12 Y79 sing 454 n n C30 H13 Y79 sing 455 n n C30 H14 Y79 sing 456 n n C31 H15 Y79 sing 457 n n C31 H16 Y79 sing 458 n n C32 H17 Y79 sing 459 n n C32 H18 Y79 sing 460 n n N11 H19 Y79 sing 461 n n N11 H20 Y79 sing 462 n n N19 H21 Y79 sing 463 n n N3 H22 Y79 sing 464 n n O24 H23 Y79 sing 465 n n O28 H24 Y79 sing 466 n n # _atom_sites.entry_id 8FJW _atom_sites.fract_transf_matrix[1][1] 0.013447 _atom_sites.fract_transf_matrix[1][2] 0.007763 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAR A 1 1101 1101 GAR GAR . C 3 Y79 A 1 1102 1201 Y79 G34 . D 4 HOH A 1 1201 34 HOH HOH . D 4 HOH A 2 1202 17 HOH HOH . D 4 HOH A 3 1203 27 HOH HOH . D 4 HOH A 4 1204 60 HOH HOH . D 4 HOH A 5 1205 41 HOH HOH . D 4 HOH A 6 1206 18 HOH HOH . D 4 HOH A 7 1207 33 HOH HOH . D 4 HOH A 8 1208 32 HOH HOH . D 4 HOH A 9 1209 83 HOH HOH . D 4 HOH A 10 1210 66 HOH HOH . D 4 HOH A 11 1211 6 HOH HOH . D 4 HOH A 12 1212 79 HOH HOH . D 4 HOH A 13 1213 22 HOH HOH . D 4 HOH A 14 1214 52 HOH HOH . D 4 HOH A 15 1215 45 HOH HOH . D 4 HOH A 16 1216 84 HOH HOH . D 4 HOH A 17 1217 26 HOH HOH . D 4 HOH A 18 1218 71 HOH HOH . D 4 HOH A 19 1219 59 HOH HOH . D 4 HOH A 20 1220 43 HOH HOH . D 4 HOH A 21 1221 37 HOH HOH . D 4 HOH A 22 1222 38 HOH HOH . D 4 HOH A 23 1223 40 HOH HOH . D 4 HOH A 24 1224 36 HOH HOH . D 4 HOH A 25 1225 35 HOH HOH . D 4 HOH A 26 1226 61 HOH HOH . D 4 HOH A 27 1227 47 HOH HOH . D 4 HOH A 28 1228 68 HOH HOH . D 4 HOH A 29 1229 14 HOH HOH . D 4 HOH A 30 1230 24 HOH HOH . D 4 HOH A 31 1231 5 HOH HOH . D 4 HOH A 32 1232 63 HOH HOH . D 4 HOH A 33 1233 51 HOH HOH . D 4 HOH A 34 1234 4 HOH HOH . D 4 HOH A 35 1235 29 HOH HOH . D 4 HOH A 36 1236 19 HOH HOH . D 4 HOH A 37 1237 7 HOH HOH . D 4 HOH A 38 1238 11 HOH HOH . D 4 HOH A 39 1239 16 HOH HOH . D 4 HOH A 40 1240 10 HOH HOH . D 4 HOH A 41 1241 70 HOH HOH . D 4 HOH A 42 1242 13 HOH HOH . D 4 HOH A 43 1243 62 HOH HOH . D 4 HOH A 44 1244 15 HOH HOH . D 4 HOH A 45 1245 64 HOH HOH . D 4 HOH A 46 1246 67 HOH HOH . D 4 HOH A 47 1247 88 HOH HOH . D 4 HOH A 48 1248 30 HOH HOH . D 4 HOH A 49 1249 90 HOH HOH . D 4 HOH A 50 1250 85 HOH HOH . D 4 HOH A 51 1251 9 HOH HOH . D 4 HOH A 52 1252 56 HOH HOH . D 4 HOH A 53 1253 28 HOH HOH . D 4 HOH A 54 1254 87 HOH HOH . D 4 HOH A 55 1255 53 HOH HOH . D 4 HOH A 56 1256 54 HOH HOH . D 4 HOH A 57 1257 65 HOH HOH . D 4 HOH A 58 1258 20 HOH HOH . D 4 HOH A 59 1259 8 HOH HOH . D 4 HOH A 60 1260 21 HOH HOH . D 4 HOH A 61 1261 44 HOH HOH . D 4 HOH A 62 1262 89 HOH HOH . D 4 HOH A 63 1263 48 HOH HOH . D 4 HOH A 64 1264 12 HOH HOH . D 4 HOH A 65 1265 91 HOH HOH . D 4 HOH A 66 1266 2 HOH HOH . D 4 HOH A 67 1267 31 HOH HOH . D 4 HOH A 68 1268 3 HOH HOH . D 4 HOH A 69 1269 42 HOH HOH . D 4 HOH A 70 1270 46 HOH HOH . D 4 HOH A 71 1271 1 HOH HOH . D 4 HOH A 72 1272 49 HOH HOH . D 4 HOH A 73 1273 58 HOH HOH . D 4 HOH A 74 1274 72 HOH HOH . D 4 HOH A 75 1275 57 HOH HOH . D 4 HOH A 76 1276 55 HOH HOH . D 4 HOH A 77 1277 50 HOH HOH . D 4 HOH A 78 1278 74 HOH HOH . D 4 HOH A 79 1279 25 HOH HOH . D 4 HOH A 80 1280 82 HOH HOH . D 4 HOH A 81 1281 75 HOH HOH . D 4 HOH A 82 1282 78 HOH HOH . D 4 HOH A 83 1283 23 HOH HOH . D 4 HOH A 84 1284 81 HOH HOH . D 4 HOH A 85 1285 86 HOH HOH . D 4 HOH A 86 1286 77 HOH HOH . D 4 HOH A 87 1287 80 HOH HOH . D 4 HOH A 88 1288 73 HOH HOH . D 4 HOH A 89 1289 76 HOH HOH . D 4 HOH A 90 1290 39 HOH HOH . D 4 HOH A 91 1291 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 Y79 . . . C 3 -26.253 12.128 27.898 0.82 50.93 ? C8 Y79 1102 A 1 HETATM 2 C C5 Y79 . . . C 3 -28.027 10.851 28.38 0.82 53.9 ? C5 Y79 1102 A 1 HETATM 3 C C6 Y79 . . . C 3 -28.165 12.108 28.965 0.82 52.2 ? C6 Y79 1102 A 1 HETATM 4 N N1 Y79 . . . C 3 -26.076 9.993 26.942 0.82 51.32 ? N1 Y79 1102 A 1 HETATM 5 C C2 Y79 . . . C 3 -24.904 10.323 26.417 0.82 53.53 ? C2 Y79 1102 A 1 HETATM 6 C C4 Y79 . . . C 3 -24.994 12.446 27.319 0.82 52.71 ? C4 Y79 1102 A 1 HETATM 7 C C9 Y79 . . . C 3 -26.777 10.879 27.69 0.82 51.33 ? C9 Y79 1102 A 1 HETATM 8 C C12 Y79 . . . C 3 -25.947 10.379 34.699 0.82 70.21 ? C12 Y79 1102 A 1 HETATM 9 C C13 Y79 . . . C 3 -24.688 10.956 34.61 0.82 69 ? C13 Y79 1102 A 1 HETATM 10 C C14 Y79 . . . C 3 -27.051 11.014 34.157 0.82 65.5 ? C14 Y79 1102 A 1 HETATM 11 C C15 Y79 . . . C 3 -24.532 12.18 33.977 0.82 60.55 ? C15 Y79 1102 A 1 HETATM 12 C C16 Y79 . . . C 3 -26.897 12.234 33.527 0.82 66.32 ? C16 Y79 1102 A 1 HETATM 13 C C17 Y79 . . . C 3 -26.151 9.027 35.384 0.82 73.33 ? C17 Y79 1102 A 1 HETATM 14 C C20 Y79 . . . C 3 -27.494 6.896 35.542 0.82 71.81 ? C20 Y79 1102 A 1 HETATM 15 C C21 Y79 . . . C 3 -28.826 6.934 36.285 0.82 70.84 ? C21 Y79 1102 A 1 HETATM 16 C C22 Y79 . . . C 3 -28.975 8.234 37.075 0.82 71.48 ? C22 Y79 1102 A 1 HETATM 17 C C23 Y79 . . . C 3 -30.09 8.166 38.113 0.82 73.64 ? C23 Y79 1102 A 1 HETATM 18 C C26 Y79 . . . C 3 -27.538 5.859 34.427 0.82 72.64 ? C26 Y79 1102 A 1 HETATM 19 C C29 Y79 . . . C 3 -26.874 14.22 29.083 0.82 56.32 ? C29 Y79 1102 A 1 HETATM 20 C C30 Y79 . . . C 3 -25.853 14.256 30.218 0.82 56.07 ? C30 Y79 1102 A 1 HETATM 21 C C31 Y79 . . . C 3 -26.531 14.181 31.582 0.82 55.43 ? C31 Y79 1102 A 1 HETATM 22 C C32 Y79 . . . C 3 -25.525 14.155 32.731 0.82 61.77 ? C32 Y79 1102 A 1 HETATM 23 C C33 Y79 . . . C 3 -25.645 12.814 33.444 0.82 63.86 ? C33 Y79 1102 A 1 HETATM 24 F F34 Y79 . . . C 3 -23.602 10.323 35.144 0.82 70.47 ? F34 Y79 1102 A 1 HETATM 25 N N11 Y79 . . . C 3 -24.187 9.344 25.622 0.82 57.24 ? N11 Y79 1102 A 1 HETATM 26 N N19 Y79 . . . C 3 -27.254 8.192 34.938 0.82 73.06 ? N19 Y79 1102 A 1 HETATM 27 N N3 Y79 . . . C 3 -24.366 11.527 26.598 0.82 53 ? N3 Y79 1102 A 1 HETATM 28 N N7 Y79 . . . C 3 -27.109 12.848 28.663 0.82 52.2 ? N7 Y79 1102 A 1 HETATM 29 O O10 Y79 . . . C 3 -24.434 13.714 27.514 0.82 54.36 ? O10 Y79 1102 A 1 HETATM 30 O O18 Y79 . . . C 3 -25.43 8.666 36.251 0.82 74.27 ? O18 Y79 1102 A 1 HETATM 31 O O24 Y79 . . . C 3 -30.34 7.076 38.693 0.82 77.17 ? O24 Y79 1102 A 1 HETATM 32 O O25 Y79 . . . C 3 -30.751 9.199 38.392 0.82 71.52 ? O25 Y79 1102 A 1 HETATM 33 O O27 Y79 . . . C 3 -26.796 4.845 34.482 0.82 75.07 ? O27 Y79 1102 A 1 HETATM 34 O O28 Y79 . . . C 3 -28.312 6.024 33.448 0.82 72.42 ? O28 Y79 1102 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 52 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #