data_8FJY
#
_model_server_result.job_id            T47W0ADYnsBio01-6HKHxg 
_model_server_result.datetime_utc      '2024-11-23 15:42:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fjy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1102}' 
#
_entry.id    8FJY 
#
_exptl.entry_id    8FJY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              441.437 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-{4-[3-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)propyl]benzoyl}-L-glutamic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8FJY 
_cell.length_a            75.478 
_cell.length_b            75.478 
_cell.length_c            100.771 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FJY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H23 N5 O6' 
_chem_comp.formula_weight    441.437 
_chem_comp.id                Y6U 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-{4-[3-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)propyl]benzoyl}-L-glutamic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N11 C2 Y6U sing 407 n n 
N3 C2 Y6U sing 408 n n 
N3 C4 Y6U sing 409 n n 
C2 N1 Y6U doub 410 n n 
O10 C4 Y6U doub 411 n n 
C4 C8 Y6U sing 412 n n 
N1 C9 Y6U sing 413 n n 
C8 C9 Y6U doub 414 n y 
C8 N7 Y6U sing 415 n y 
C9 C5 Y6U sing 416 n y 
N7 C29 Y6U sing 417 n n 
N7 C6 Y6U sing 418 n y 
C5 C6 Y6U doub 419 n y 
C29 C30 Y6U sing 420 n n 
C30 C31 Y6U sing 421 n n 
C31 C32 Y6U sing 422 n n 
C15 C32 Y6U doub 423 n y 
C15 C13 Y6U sing 424 n y 
C32 C16 Y6U sing 425 n y 
C13 C12 Y6U doub 426 n y 
C16 C14 Y6U doub 427 n y 
O27 C26 Y6U doub 428 n n 
C12 C14 Y6U sing 429 n y 
C12 C17 Y6U sing 430 n n 
N19 C17 Y6U sing 431 n n 
N19 C20 Y6U sing 432 n n 
C26 O28 Y6U sing 433 n n 
C26 C20 Y6U sing 434 n n 
C17 O18 Y6U doub 435 n n 
C20 C21 Y6U sing 436 n n 
C21 C22 Y6U sing 437 n n 
C22 C23 Y6U sing 438 n n 
C23 O24 Y6U doub 439 n n 
C23 O25 Y6U sing 440 n n 
C5 H1 Y6U sing 441 n n 
C6 H2 Y6U sing 442 n n 
C14 H3 Y6U sing 443 n n 
C13 H4 Y6U sing 444 n n 
C15 H5 Y6U sing 445 n n 
C16 H6 Y6U sing 446 n n 
C20 H7 Y6U sing 447 n n 
C21 H8 Y6U sing 448 n n 
C21 H9 Y6U sing 449 n n 
C22 H10 Y6U sing 450 n n 
C22 H11 Y6U sing 451 n n 
C29 H12 Y6U sing 452 n n 
C29 H13 Y6U sing 453 n n 
C30 H14 Y6U sing 454 n n 
C30 H15 Y6U sing 455 n n 
C31 H16 Y6U sing 456 n n 
C31 H17 Y6U sing 457 n n 
N11 H18 Y6U sing 458 n n 
N11 H19 Y6U sing 459 n n 
N19 H20 Y6U sing 460 n n 
N3 H21 Y6U sing 461 n n 
O25 H22 Y6U sing 462 n n 
O28 H23 Y6U sing 463 n n 
#
_atom_sites.entry_id                     8FJY 
_atom_sites.fract_transf_matrix[1][1]    0.013249 
_atom_sites.fract_transf_matrix[1][2]    0.007649 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015299 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009923 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GAR A 1 1101 1101 GAR GAR . 
C 3 Y6U A 1 1102 1201 Y6U G29 . 
D 4 HOH A 1 1201 15 HOH HOH . 
D 4 HOH A 2 1202 11 HOH HOH . 
D 4 HOH A 3 1203 7 HOH HOH . 
D 4 HOH A 4 1204 8 HOH HOH . 
D 4 HOH A 5 1205 6 HOH HOH . 
D 4 HOH A 6 1206 9 HOH HOH . 
D 4 HOH A 7 1207 5 HOH HOH . 
D 4 HOH A 8 1208 2 HOH HOH . 
D 4 HOH A 9 1209 1 HOH HOH . 
D 4 HOH A 10 1210 13 HOH HOH . 
D 4 HOH A 11 1211 3 HOH HOH . 
D 4 HOH A 12 1212 10 HOH HOH . 
D 4 HOH A 13 1213 4 HOH HOH . 
D 4 HOH A 14 1214 14 HOH HOH . 
D 4 HOH A 15 1215 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 Y6U . . . C 3 -25.037 10.818 26.231 0.9 50.47 ? C2 Y6U 1102 A 1 
HETATM 2 C C9 Y6U . . . C 3 -26.518 11.845 27.663 0.9 50.88 ? C9 Y6U 1102 A 1 
HETATM 3 C C12 Y6U . . . C 3 -25.603 11.928 33.644 0.9 44.17 ? C12 Y6U 1102 A 1 
HETATM 4 C C4 Y6U . . . C 3 -24.599 12.99 26.842 0.9 52.62 ? C4 Y6U 1102 A 1 
HETATM 5 C C5 Y6U . . . C 3 -27.609 12.101 28.51 0.9 51.16 ? C5 Y6U 1102 A 1 
HETATM 6 C C6 Y6U . . . C 3 -27.447 13.405 28.951 0.9 49.71 ? C6 Y6U 1102 A 1 
HETATM 7 C C23 Y6U . . . C 3 -29.064 8.026 37.737 0.9 57.97 ? C23 Y6U 1102 A 1 
HETATM 8 C C26 Y6U . . . C 3 -27.242 7.084 34.158 0.9 53.94 ? C26 Y6U 1102 A 1 
HETATM 9 C C8 Y6U . . . C 3 -25.764 13.003 27.636 0.9 48.77 ? C8 Y6U 1102 A 1 
HETATM 10 C C14 Y6U . . . C 3 -24.433 12.666 33.657 0.9 43.81 ? C14 Y6U 1102 A 1 
HETATM 11 C C13 Y6U . . . C 3 -26.662 12.322 32.86 0.9 50.77 ? C13 Y6U 1102 A 1 
HETATM 12 C C15 Y6U . . . C 3 -26.54 13.466 32.087 0.9 57.26 ? C15 Y6U 1102 A 1 
HETATM 13 C C16 Y6U . . . C 3 -24.314 13.82 32.893 0.9 48.91 ? C16 Y6U 1102 A 1 
HETATM 14 C C17 Y6U . . . C 3 -25.692 10.647 34.474 0.9 50.24 ? C17 Y6U 1102 A 1 
HETATM 15 C C20 Y6U . . . C 3 -26.566 8.293 34.835 0.9 56.66 ? C20 Y6U 1102 A 1 
HETATM 16 C C21 Y6U . . . C 3 -27.239 8.596 36.17 0.9 47.05 ? C21 Y6U 1102 A 1 
HETATM 17 C C22 Y6U . . . C 3 -28.632 7.974 36.276 0.9 47.2 ? C22 Y6U 1102 A 1 
HETATM 18 C C29 Y6U . . . C 3 -25.883 15.28 28.69 0.9 47.41 ? C29 Y6U 1102 A 1 
HETATM 19 C C30 Y6U . . . C 3 -24.796 15.277 29.786 0.9 51.79 ? C30 Y6U 1102 A 1 
HETATM 20 C C31 Y6U . . . C 3 -25.288 15.51 31.234 0.9 49.83 ? C31 Y6U 1102 A 1 
HETATM 21 C C32 Y6U . . . C 3 -25.372 14.225 32.092 0.9 54.51 ? C32 Y6U 1102 A 1 
HETATM 22 N N1 Y6U . . . C 3 -26.135 10.772 26.958 0.9 48.01 ? N1 Y6U 1102 A 1 
HETATM 23 N N11 Y6U . . . C 3 -24.656 9.656 25.485 0.9 50.09 ? N11 Y6U 1102 A 1 
HETATM 24 N N19 Y6U . . . C 3 -26.525 9.523 34.03 0.9 55.25 ? N19 Y6U 1102 A 1 
HETATM 25 N N3 Y6U . . . C 3 -24.277 11.896 26.163 0.9 53.14 ? N3 Y6U 1102 A 1 
HETATM 26 N N7 Y6U . . . C 3 -26.351 13.919 28.426 0.9 48.55 ? N7 Y6U 1102 A 1 
HETATM 27 O O10 Y6U . . . C 3 -23.781 14.117 26.762 0.9 55.64 ? O10 Y6U 1102 A 1 
HETATM 28 O O18 Y6U . . . C 3 -25.04 10.562 35.449 0.9 51.48 ? O18 Y6U 1102 A 1 
HETATM 29 O O24 Y6U . . . C 3 -30.012 7.301 38.133 0.9 67.73 ? O24 Y6U 1102 A 1 
HETATM 30 O O25 Y6U . . . C 3 -28.456 8.794 38.533 0.9 50.6 ? O25 Y6U 1102 A 1 
HETATM 31 O O27 Y6U . . . C 3 -27.857 7.174 33.068 0.9 50.44 ? O27 Y6U 1102 A 1 
HETATM 32 O O28 Y6U . . . C 3 -27.168 5.959 34.707 0.9 52.16 ? O28 Y6U 1102 A 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           32 
#