data_8FMV # _model_server_result.job_id rggo8PhhGzOboCCO0A2WnQ _model_server_result.datetime_utc '2025-01-03 06:31:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fmv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":611}' # _entry.id 8FMV # _exptl.entry_id 8FMV _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 452.551 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FMV _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 Z N N ? 6 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 O O3G ATP . D ATP 713 1_555 P MG MG . D MG 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc2 O O1B ATP . D ATP 713 1_555 P MG MG . D MG 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc3 O O3B ATP . D ATP 713 1_555 P MG MG . D MG 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc4 O O3A ATP . D ATP 713 1_555 P MG MG . D MG 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? # _chem_comp.formula 'C27 H28 N6 O' _chem_comp.formula_weight 452.551 _chem_comp.id HT1 _chem_comp.mon_nstd_flag . _chem_comp.name "2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HOECHST 33342' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HT1 sing 199 n n C1 C2 HT1 doub 200 n y C1 C6 HT1 sing 201 n y O1 C26 HT1 sing 202 n n C2 C3 HT1 sing 203 n y C2 H2 HT1 sing 204 n n C3 C4 HT1 doub 205 n y C3 H3 HT1 sing 206 n n C4 C5 HT1 sing 207 n y C4 C7 HT1 sing 208 n y C5 C6 HT1 doub 209 n y C5 H5 HT1 sing 210 n n C6 H6 HT1 sing 211 n n C7 N1 HT1 sing 212 n y C7 N2 HT1 doub 213 n y N1 C8 HT1 sing 214 n y N1 HN1 HT1 sing 215 n n C8 C9 HT1 doub 216 n y C8 C13 HT1 sing 217 n y C9 N2 HT1 sing 218 n y C9 C10 HT1 sing 219 n y C10 C11 HT1 doub 220 n y C10 H10 HT1 sing 221 n n C11 C12 HT1 sing 222 n y C11 H11 HT1 sing 223 n n C12 C13 HT1 doub 224 n y C12 C14 HT1 sing 225 n y C13 H13 HT1 sing 226 n n C14 N3 HT1 sing 227 n y C14 N4 HT1 doub 228 n y N3 C15 HT1 sing 229 n y N3 HN3 HT1 sing 230 n n C15 C16 HT1 doub 231 n y C15 C20 HT1 sing 232 n y C16 N4 HT1 sing 233 n y C16 C17 HT1 sing 234 n y C17 C18 HT1 doub 235 n y C17 H17 HT1 sing 236 n n C18 C19 HT1 sing 237 n y C18 H18 HT1 sing 238 n n C19 C20 HT1 doub 239 n y C19 N5 HT1 sing 240 n n C20 H20 HT1 sing 241 n n N5 C21 HT1 sing 242 n n N5 C24 HT1 sing 243 n n C21 C22 HT1 sing 244 n n C21 H211 HT1 sing 245 n n C21 H212 HT1 sing 246 n n C22 N6 HT1 sing 247 n n C22 H221 HT1 sing 248 n n C22 H222 HT1 sing 249 n n N6 C23 HT1 sing 250 n n N6 C25 HT1 sing 251 n n C23 C24 HT1 sing 252 n n C23 H231 HT1 sing 253 n n C23 H232 HT1 sing 254 n n C24 H241 HT1 sing 255 n n C24 H242 HT1 sing 256 n n C25 H251 HT1 sing 257 n n C25 H252 HT1 sing 258 n n C25 H253 HT1 sing 259 n n C26 C27 HT1 sing 260 n n C26 H261 HT1 sing 261 n n C26 H262 HT1 sing 262 n n C27 H271 HT1 sing 263 n n C27 H272 HT1 sing 264 n n C27 H273 HT1 sing 265 n n # _atom_sites.entry_id 8FMV _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 POV D 1 701 1 POV POV . D 3 POV D 1 702 2 POV POV . E 3 POV D 1 703 3 POV POV . F 3 POV D 1 704 4 POV POV . G 3 POV D 1 705 7 POV POV . H 3 POV D 1 706 8 POV POV . I 3 POV D 1 707 14 POV POV . J 3 POV D 1 708 15 POV POV . K 3 POV D 1 709 16 POV POV . L 3 POV D 1 710 17 POV POV . M 3 POV D 1 711 18 POV POV . N 3 POV D 1 712 20 POV POV . O 4 ATP D 1 713 1 ATP ATP . P 5 MG D 1 714 1 MG MG . Q 3 POV C 1 601 5 POV POV . R 3 POV C 1 602 6 POV POV . S 3 POV C 1 603 9 POV POV . T 3 POV C 1 604 10 POV POV . U 3 POV C 1 605 11 POV POV . V 3 POV C 1 606 12 POV POV . W 3 POV C 1 607 13 POV POV . X 3 POV C 1 608 19 POV POV . Y 4 ATP C 1 609 2 ATP ATP . Z 6 HT1 C 1 610 3 HT1 HT1 . AA 6 HT1 C 1 611 4 HT1 HT1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HT1 . . . AA 6 171.156 176.807 184.248 1 108.15 ? C1 HT1 611 C 1 HETATM 2 O O1 HT1 . . . AA 6 171.402 176.858 185.593 1 108.06 ? O1 HT1 611 C 1 HETATM 3 C C2 HT1 . . . AA 6 170.166 175.956 183.783 1 107.63 ? C2 HT1 611 C 1 HETATM 4 C C3 HT1 . . . AA 6 169.9 175.886 182.433 1 106.3 ? C3 HT1 611 C 1 HETATM 5 C C4 HT1 . . . AA 6 170.622 176.645 181.521 1 105.77 ? C4 HT1 611 C 1 HETATM 6 C C5 HT1 . . . AA 6 171.612 177.491 182.003 1 105.81 ? C5 HT1 611 C 1 HETATM 7 C C6 HT1 . . . AA 6 171.886 177.571 183.351 1 106.72 ? C6 HT1 611 C 1 HETATM 8 C C7 HT1 . . . AA 6 170.333 176.572 180.088 1 104.51 ? C7 HT1 611 C 1 HETATM 9 N N1 HT1 . . . AA 6 169.171 176.07 179.594 1 105.7 ? N1 HT1 611 C 1 HETATM 10 C C8 HT1 . . . AA 6 169.244 176.163 178.22 1 107 ? C8 HT1 611 C 1 HETATM 11 C C9 HT1 . . . AA 6 170.483 176.739 177.945 1 107.53 ? C9 HT1 611 C 1 HETATM 12 N N2 HT1 . . . AA 6 171.156 176.988 179.134 1 105.07 ? N2 HT1 611 C 1 HETATM 13 C C10 HT1 . . . AA 6 170.866 176.97 176.626 1 107.02 ? C10 HT1 611 C 1 HETATM 14 C C11 HT1 . . . AA 6 170.001 176.624 175.615 1 106.82 ? C11 HT1 611 C 1 HETATM 15 C C12 HT1 . . . AA 6 168.758 176.051 175.885 1 106.25 ? C12 HT1 611 C 1 HETATM 16 C C13 HT1 . . . AA 6 168.372 175.819 177.201 1 104.67 ? C13 HT1 611 C 1 HETATM 17 C C14 HT1 . . . AA 6 167.878 175.71 174.763 1 106.13 ? C14 HT1 611 C 1 HETATM 18 N N3 HT1 . . . AA 6 168.094 176.11 173.485 1 106.85 ? N3 HT1 611 C 1 HETATM 19 C C15 HT1 . . . AA 6 167.066 175.599 172.722 1 107.77 ? C15 HT1 611 C 1 HETATM 20 C C16 HT1 . . . AA 6 166.251 174.892 173.604 1 108.16 ? C16 HT1 611 C 1 HETATM 21 N N4 HT1 . . . AA 6 166.779 174.973 174.889 1 104.69 ? N4 HT1 611 C 1 HETATM 22 C C17 HT1 . . . AA 6 165.111 174.247 173.129 1 107.2 ? C17 HT1 611 C 1 HETATM 23 C C18 HT1 . . . AA 6 164.813 174.323 171.788 1 107.25 ? C18 HT1 611 C 1 HETATM 24 C C19 HT1 . . . AA 6 165.63 175.033 170.896 1 106.59 ? C19 HT1 611 C 1 HETATM 25 C C20 HT1 . . . AA 6 166.768 175.68 171.373 1 105.01 ? C20 HT1 611 C 1 HETATM 26 N N5 HT1 . . . AA 6 165.325 175.113 169.542 1 106.25 ? N5 HT1 611 C 1 HETATM 27 C C21 HT1 . . . AA 6 163.964 175.106 168.997 1 105.71 ? C21 HT1 611 C 1 HETATM 28 C C22 HT1 . . . AA 6 163.847 174.112 167.865 1 107.34 ? C22 HT1 611 C 1 HETATM 29 N N6 HT1 . . . AA 6 164.749 174.429 166.755 1 107.68 ? N6 HT1 611 C 1 HETATM 30 C C23 HT1 . . . AA 6 165.729 175.445 167.139 1 107.11 ? C23 HT1 611 C 1 HETATM 31 C C24 HT1 . . . AA 6 166.344 175.15 168.487 1 106.74 ? C24 HT1 611 C 1 HETATM 32 C C25 HT1 . . . AA 6 163.997 174.874 165.583 1 104.6 ? C25 HT1 611 C 1 HETATM 33 C C26 HT1 . . . AA 6 171.512 178.136 186.229 1 104.1 ? C26 HT1 611 C 1 HETATM 34 C C27 HT1 . . . AA 6 170.174 178.804 186.144 1 103.02 ? C27 HT1 611 C 1 HETATM 35 H H2 HT1 . . . AA 6 169.603 175.348 184.479 1 107.63 ? H2 HT1 611 C 1 HETATM 36 H H3 HT1 . . . AA 6 169.117 175.23 182.078 1 106.3 ? H3 HT1 611 C 1 HETATM 37 H H5 HT1 . . . AA 6 172.178 178.098 181.308 1 105.81 ? H5 HT1 611 C 1 HETATM 38 H H6 HT1 . . . AA 6 172.668 178.228 183.708 1 106.72 ? H6 HT1 611 C 1 HETATM 39 H H10 HT1 . . . AA 6 171.827 177.414 176.401 1 107.02 ? H10 HT1 611 C 1 HETATM 40 H H11 HT1 . . . AA 6 170.291 176.8 174.587 1 106.82 ? H11 HT1 611 C 1 HETATM 41 H H13 HT1 . . . AA 6 167.409 175.378 177.424 1 104.67 ? H13 HT1 611 C 1 HETATM 42 H H17 HT1 . . . AA 6 164.47 173.695 173.804 1 107.2 ? H17 HT1 611 C 1 HETATM 43 H H18 HT1 . . . AA 6 163.929 173.824 171.413 1 107.25 ? H18 HT1 611 C 1 HETATM 44 H H20 HT1 . . . AA 6 167.408 176.236 170.7 1 105.01 ? H20 HT1 611 C 1 HETATM 45 H H211 HT1 . . . AA 6 163.254 174.854 169.783 1 105.71 ? H211 HT1 611 C 1 HETATM 46 H H212 HT1 . . . AA 6 163.705 176.102 168.641 1 105.71 ? H212 HT1 611 C 1 HETATM 47 H H221 HT1 . . . AA 6 164.069 173.113 168.237 1 107.34 ? H221 HT1 611 C 1 HETATM 48 H H222 HT1 . . . AA 6 162.82 174.096 167.503 1 107.34 ? H222 HT1 611 C 1 HETATM 49 H H231 HT1 . . . AA 6 166.513 175.496 166.385 1 107.11 ? H231 HT1 611 C 1 HETATM 50 H H232 HT1 . . . AA 6 165.248 176.422 167.165 1 107.11 ? H232 HT1 611 C 1 HETATM 51 H H241 HT1 . . . AA 6 167.087 175.91 168.724 1 106.74 ? H241 HT1 611 C 1 HETATM 52 H H242 HT1 . . . AA 6 166.866 174.195 168.449 1 106.74 ? H242 HT1 611 C 1 HETATM 53 H H251 HT1 . . . AA 6 164.695 175.101 164.779 1 104.6 ? H251 HT1 611 C 1 HETATM 54 H H252 HT1 . . . AA 6 163.32 174.079 165.274 1 104.6 ? H252 HT1 611 C 1 HETATM 55 H H253 HT1 . . . AA 6 163.429 175.766 165.844 1 104.6 ? H253 HT1 611 C 1 HETATM 56 H H261 HT1 . . . AA 6 171.816 178.021 187.268 1 104.1 ? H261 HT1 611 C 1 HETATM 57 H H262 HT1 . . . AA 6 172.273 178.742 185.74 1 104.1 ? H262 HT1 611 C 1 HETATM 58 H H271 HT1 . . . AA 6 170.234 179.78 186.623 1 103.02 ? H271 HT1 611 C 1 HETATM 59 H H272 HT1 . . . AA 6 169.902 178.92 185.096 1 103.02 ? H272 HT1 611 C 1 HETATM 60 H H273 HT1 . . . AA 6 169.436 178.186 186.653 1 103.02 ? H273 HT1 611 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 171 _model_server_stats.query_time_ms 412 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 60 #