data_8FO0 # _model_server_result.job_id CG-GAae2Qsbgu5e8Y3CxSA _model_server_result.datetime_utc '2024-10-20 08:14:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fo0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8FO0 # _exptl.entry_id 8FO0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FO0 _cell.length_a 46.58 _cell.length_b 58.551 _cell.length_c 84.484 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 29 A CYS 29 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc2 A SG CYS 33 A CYS 33 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc3 A SG CYS 36 A CYS 36 1_555 B FE3 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc4 A OD1 ASP 104 A ASP 104 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc5 A O THR 105 A THR 105 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? metalc ? metalc6 A O MET 127 A MET 127 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.09 ? metalc ? metalc7 A OD1 ASP 129 A ASP 129 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc8 B FE2 SF4 . A SF4 301 1_555 C N SAM . A SAM 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.496 ? metalc ? metalc9 B FE2 SF4 . A SF4 301 1_555 C N SAM . A SAM 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.37 ? metalc ? metalc10 B FE2 SF4 . A SF4 301 1_555 C O SAM . A SAM 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.421 ? metalc ? metalc11 B FE2 SF4 . A SF4 301 1_555 C O SAM . A SAM 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.385 ? metalc ? metalc12 C OXT SAM . A SAM 302 1_555 D K K . A K 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc13 C OXT SAM . A SAM 302 1_555 D K K . A K 303 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 341 n n FE1 S3 SF4 sing 342 n n FE1 S4 SF4 sing 343 n n FE2 S1 SF4 sing 344 n n FE2 S3 SF4 sing 345 n n FE2 S4 SF4 sing 346 n n FE3 S1 SF4 sing 347 n n FE3 S2 SF4 sing 348 n n FE3 S4 SF4 sing 349 n n FE4 S1 SF4 sing 350 n n FE4 S2 SF4 sing 351 n n FE4 S3 SF4 sing 352 n n # _atom_sites.entry_id 8FO0 _atom_sites.fract_transf_matrix[1][1] 0.021468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 500 SF4 SF4 . C 3 SAM A 1 302 501 SAM SAM . D 4 K A 1 303 1 K K . E 5 HOH A 1 401 118 HOH HOH . E 5 HOH A 2 402 74 HOH HOH . E 5 HOH A 3 403 52 HOH HOH . E 5 HOH A 4 404 9 HOH HOH . E 5 HOH A 5 405 37 HOH HOH . E 5 HOH A 6 406 50 HOH HOH . E 5 HOH A 7 407 19 HOH HOH . E 5 HOH A 8 408 57 HOH HOH . E 5 HOH A 9 409 97 HOH HOH . E 5 HOH A 10 410 54 HOH HOH . E 5 HOH A 11 411 95 HOH HOH . E 5 HOH A 12 412 76 HOH HOH . E 5 HOH A 13 413 67 HOH HOH . E 5 HOH A 14 414 7 HOH HOH . E 5 HOH A 15 415 98 HOH HOH . E 5 HOH A 16 416 32 HOH HOH . E 5 HOH A 17 417 70 HOH HOH . E 5 HOH A 18 418 78 HOH HOH . E 5 HOH A 19 419 40 HOH HOH . E 5 HOH A 20 420 102 HOH HOH . E 5 HOH A 21 421 35 HOH HOH . E 5 HOH A 22 422 23 HOH HOH . E 5 HOH A 23 423 11 HOH HOH . E 5 HOH A 24 424 110 HOH HOH . E 5 HOH A 25 425 56 HOH HOH . E 5 HOH A 26 426 119 HOH HOH . E 5 HOH A 27 427 42 HOH HOH . E 5 HOH A 28 428 68 HOH HOH . E 5 HOH A 29 429 72 HOH HOH . E 5 HOH A 30 430 1 HOH HOH . E 5 HOH A 31 431 2 HOH HOH . E 5 HOH A 32 432 41 HOH HOH . E 5 HOH A 33 433 12 HOH HOH . E 5 HOH A 34 434 122 HOH HOH . E 5 HOH A 35 435 60 HOH HOH . E 5 HOH A 36 436 30 HOH HOH . E 5 HOH A 37 437 6 HOH HOH . E 5 HOH A 38 438 114 HOH HOH . E 5 HOH A 39 439 90 HOH HOH . E 5 HOH A 40 440 25 HOH HOH . E 5 HOH A 41 441 24 HOH HOH . E 5 HOH A 42 442 16 HOH HOH . E 5 HOH A 43 443 127 HOH HOH . E 5 HOH A 44 444 63 HOH HOH . E 5 HOH A 45 445 81 HOH HOH . E 5 HOH A 46 446 18 HOH HOH . E 5 HOH A 47 447 83 HOH HOH . E 5 HOH A 48 448 100 HOH HOH . E 5 HOH A 49 449 27 HOH HOH . E 5 HOH A 50 450 38 HOH HOH . E 5 HOH A 51 451 36 HOH HOH . E 5 HOH A 52 452 8 HOH HOH . E 5 HOH A 53 453 47 HOH HOH . E 5 HOH A 54 454 103 HOH HOH . E 5 HOH A 55 455 88 HOH HOH . E 5 HOH A 56 456 123 HOH HOH . E 5 HOH A 57 457 13 HOH HOH . E 5 HOH A 58 458 107 HOH HOH . E 5 HOH A 59 459 10 HOH HOH . E 5 HOH A 60 460 51 HOH HOH . E 5 HOH A 61 461 45 HOH HOH . E 5 HOH A 62 462 59 HOH HOH . E 5 HOH A 63 463 14 HOH HOH . E 5 HOH A 64 464 3 HOH HOH . E 5 HOH A 65 465 48 HOH HOH . E 5 HOH A 66 466 22 HOH HOH . E 5 HOH A 67 467 138 HOH HOH . E 5 HOH A 68 468 61 HOH HOH . E 5 HOH A 69 469 20 HOH HOH . E 5 HOH A 70 470 26 HOH HOH . E 5 HOH A 71 471 58 HOH HOH . E 5 HOH A 72 472 73 HOH HOH . E 5 HOH A 73 473 132 HOH HOH . E 5 HOH A 74 474 65 HOH HOH . E 5 HOH A 75 475 128 HOH HOH . E 5 HOH A 76 476 53 HOH HOH . E 5 HOH A 77 477 120 HOH HOH . E 5 HOH A 78 478 21 HOH HOH . E 5 HOH A 79 479 93 HOH HOH . E 5 HOH A 80 480 29 HOH HOH . E 5 HOH A 81 481 130 HOH HOH . E 5 HOH A 82 482 71 HOH HOH . E 5 HOH A 83 483 62 HOH HOH . E 5 HOH A 84 484 15 HOH HOH . E 5 HOH A 85 485 5 HOH HOH . E 5 HOH A 86 486 87 HOH HOH . E 5 HOH A 87 487 109 HOH HOH . E 5 HOH A 88 488 94 HOH HOH . E 5 HOH A 89 489 85 HOH HOH . E 5 HOH A 90 490 66 HOH HOH . E 5 HOH A 91 491 92 HOH HOH . E 5 HOH A 92 492 96 HOH HOH . E 5 HOH A 93 493 17 HOH HOH . E 5 HOH A 94 494 117 HOH HOH . E 5 HOH A 95 495 64 HOH HOH . E 5 HOH A 96 496 106 HOH HOH . E 5 HOH A 97 497 77 HOH HOH . E 5 HOH A 98 498 44 HOH HOH . E 5 HOH A 99 499 46 HOH HOH . E 5 HOH A 100 500 43 HOH HOH . E 5 HOH A 101 501 115 HOH HOH . E 5 HOH A 102 502 34 HOH HOH . E 5 HOH A 103 503 28 HOH HOH . E 5 HOH A 104 504 104 HOH HOH . E 5 HOH A 105 505 39 HOH HOH . E 5 HOH A 106 506 79 HOH HOH . E 5 HOH A 107 507 4 HOH HOH . E 5 HOH A 108 508 137 HOH HOH . E 5 HOH A 109 509 31 HOH HOH . E 5 HOH A 110 510 33 HOH HOH . E 5 HOH A 111 511 108 HOH HOH . E 5 HOH A 112 512 131 HOH HOH . E 5 HOH A 113 513 89 HOH HOH . E 5 HOH A 114 514 105 HOH HOH . E 5 HOH A 115 515 84 HOH HOH . E 5 HOH A 116 516 121 HOH HOH . E 5 HOH A 117 517 133 HOH HOH . E 5 HOH A 118 518 125 HOH HOH . E 5 HOH A 119 519 80 HOH HOH . E 5 HOH A 120 520 113 HOH HOH . E 5 HOH A 121 521 75 HOH HOH . E 5 HOH A 122 522 124 HOH HOH . E 5 HOH A 123 523 91 HOH HOH . E 5 HOH A 124 524 49 HOH HOH . E 5 HOH A 125 525 111 HOH HOH . E 5 HOH A 126 526 126 HOH HOH . E 5 HOH A 127 527 112 HOH HOH . E 5 HOH A 128 528 134 HOH HOH . E 5 HOH A 129 529 129 HOH HOH . E 5 HOH A 130 530 135 HOH HOH . E 5 HOH A 131 531 101 HOH HOH . E 5 HOH A 132 532 69 HOH HOH . E 5 HOH A 133 533 82 HOH HOH . E 5 HOH A 134 534 136 HOH HOH . E 5 HOH A 135 535 55 HOH HOH . E 5 HOH A 136 536 86 HOH HOH . E 5 HOH A 137 537 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 3.191 69.269 15.254 1 22.89 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . . . B 2 2.515 67.813 17.514 1 27.31 ? FE2 SF4 301 A 1 HETATM 3 FE FE3 SF4 . . . B 2 0.815 67.959 15.328 1 23.79 ? FE3 SF4 301 A 1 HETATM 4 FE FE4 SF4 . . . B 2 1.163 70.165 16.875 1 22 ? FE4 SF4 301 A 1 HETATM 5 S S1 SF4 . . . B 2 0.23 68.167 17.491 1 22.37 ? S1 SF4 301 A 1 HETATM 6 S S2 SF4 . . . B 2 1.166 70.099 14.613 1 21.27 ? S2 SF4 301 A 1 HETATM 7 S S3 SF4 . . . B 2 3.386 69.924 17.399 1 22.44 ? S3 SF4 301 A 1 HETATM 8 S S4 SF4 . . . B 2 2.895 67.008 15.401 1 27.04 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #