data_8FO6 # _model_server_result.job_id CYaubyCyMMttu1Qf0elr8g _model_server_result.datetime_utc '2024-10-19 16:38:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fo6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 8FO6 # _exptl.entry_id 8FO6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.67 _cell.angle_gamma 90 _cell.entry_id 8FO6 _cell.length_a 77.527 _cell.length_b 58.901 _cell.length_c 88.394 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FO6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 278 A LYS 347 1_555 A N TPO 279 A TPO 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C TPO 279 A TPO 348 1_555 A N ILE 280 A ILE 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A ND1 HIS 191 A HIS 260 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 A NE2 HIS 243 A HIS 312 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc3 A SG CYS 245 A CYS 314 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc4 A SG CYS 249 A CYS 318 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc5 F O HOH . A HOH 929 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc6 B OD1 ASP 93 B ASP 93 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc7 B OD1 ASP 95 B ASP 95 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc8 B OD1 ASN 97 B ASN 97 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc9 B O TYR 99 B TYR 99 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc10 B OE1 GLU 104 B GLU 104 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc11 B OE2 GLU 104 B GLU 104 1_555 D CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc12 B OD1 ASP 129 B ASP 129 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc13 B OD1 ASP 131 B ASP 131 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc14 B OD2 ASP 131 B ASP 131 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc15 B OD1 ASP 133 B ASP 133 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc16 B O GLN 135 B GLN 135 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc17 B OE1 GLU 140 B GLU 140 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc18 B OE2 GLU 140 B GLU 140 1_555 E CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc19 E CA CA . B CA 202 1_555 G O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8FO6 _atom_sites.fract_transf_matrix[1][1] 0.012899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004611 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 801 1 ZN ZN . D 4 CA B 1 201 70 CA CA . E 4 CA B 1 202 71 CA CA . F 5 HOH A 1 901 104 HOH HOH . F 5 HOH A 2 902 93 HOH HOH . F 5 HOH A 3 903 78 HOH HOH . F 5 HOH A 4 904 48 HOH HOH . F 5 HOH A 5 905 71 HOH HOH . F 5 HOH A 6 906 103 HOH HOH . F 5 HOH A 7 907 90 HOH HOH . F 5 HOH A 8 908 55 HOH HOH . F 5 HOH A 9 909 29 HOH HOH . F 5 HOH A 10 910 21 HOH HOH . F 5 HOH A 11 911 69 HOH HOH . F 5 HOH A 12 912 56 HOH HOH . F 5 HOH A 13 913 27 HOH HOH . F 5 HOH A 14 914 95 HOH HOH . F 5 HOH A 15 915 89 HOH HOH . F 5 HOH A 16 916 50 HOH HOH . F 5 HOH A 17 917 31 HOH HOH . F 5 HOH A 18 918 70 HOH HOH . F 5 HOH A 19 919 87 HOH HOH . F 5 HOH A 20 920 4 HOH HOH . F 5 HOH A 21 921 36 HOH HOH . F 5 HOH A 22 922 12 HOH HOH . F 5 HOH A 23 923 102 HOH HOH . F 5 HOH A 24 924 45 HOH HOH . F 5 HOH A 25 925 30 HOH HOH . F 5 HOH A 26 926 22 HOH HOH . F 5 HOH A 27 927 34 HOH HOH . F 5 HOH A 28 928 110 HOH HOH . F 5 HOH A 29 929 3 HOH HOH . F 5 HOH A 30 930 75 HOH HOH . F 5 HOH A 31 931 35 HOH HOH . F 5 HOH A 32 932 47 HOH HOH . F 5 HOH A 33 933 85 HOH HOH . F 5 HOH A 34 934 77 HOH HOH . F 5 HOH A 35 935 9 HOH HOH . F 5 HOH A 36 936 84 HOH HOH . F 5 HOH A 37 937 2 HOH HOH . F 5 HOH A 38 938 61 HOH HOH . F 5 HOH A 39 939 62 HOH HOH . F 5 HOH A 40 940 19 HOH HOH . F 5 HOH A 41 941 17 HOH HOH . F 5 HOH A 42 942 81 HOH HOH . F 5 HOH A 43 943 76 HOH HOH . F 5 HOH A 44 944 7 HOH HOH . F 5 HOH A 45 945 33 HOH HOH . F 5 HOH A 46 946 8 HOH HOH . F 5 HOH A 47 947 72 HOH HOH . F 5 HOH A 48 948 23 HOH HOH . F 5 HOH A 49 949 88 HOH HOH . F 5 HOH A 50 950 54 HOH HOH . F 5 HOH A 51 951 26 HOH HOH . F 5 HOH A 52 952 43 HOH HOH . F 5 HOH A 53 953 6 HOH HOH . F 5 HOH A 54 954 25 HOH HOH . F 5 HOH A 55 955 37 HOH HOH . F 5 HOH A 56 956 10 HOH HOH . F 5 HOH A 57 957 49 HOH HOH . F 5 HOH A 58 958 51 HOH HOH . F 5 HOH A 59 959 5 HOH HOH . F 5 HOH A 60 960 59 HOH HOH . F 5 HOH A 61 961 94 HOH HOH . F 5 HOH A 62 962 16 HOH HOH . F 5 HOH A 63 963 66 HOH HOH . F 5 HOH A 64 964 20 HOH HOH . F 5 HOH A 65 965 42 HOH HOH . F 5 HOH A 66 966 68 HOH HOH . F 5 HOH A 67 967 44 HOH HOH . F 5 HOH A 68 968 52 HOH HOH . F 5 HOH A 69 969 58 HOH HOH . F 5 HOH A 70 970 91 HOH HOH . F 5 HOH A 71 971 73 HOH HOH . F 5 HOH A 72 972 24 HOH HOH . F 5 HOH A 73 973 11 HOH HOH . F 5 HOH A 74 974 14 HOH HOH . F 5 HOH A 75 975 80 HOH HOH . F 5 HOH A 76 976 15 HOH HOH . F 5 HOH A 77 977 83 HOH HOH . F 5 HOH A 78 978 67 HOH HOH . F 5 HOH A 79 979 64 HOH HOH . F 5 HOH A 80 980 1 HOH HOH . F 5 HOH A 81 981 107 HOH HOH . F 5 HOH A 82 982 46 HOH HOH . F 5 HOH A 83 983 18 HOH HOH . F 5 HOH A 84 984 86 HOH HOH . F 5 HOH A 85 985 13 HOH HOH . F 5 HOH A 86 986 60 HOH HOH . F 5 HOH A 87 987 57 HOH HOH . F 5 HOH A 88 988 109 HOH HOH . F 5 HOH A 89 989 40 HOH HOH . F 5 HOH A 90 990 99 HOH HOH . F 5 HOH A 91 991 74 HOH HOH . F 5 HOH A 92 992 28 HOH HOH . F 5 HOH A 93 993 79 HOH HOH . F 5 HOH A 94 994 108 HOH HOH . F 5 HOH A 95 995 92 HOH HOH . F 5 HOH A 96 996 38 HOH HOH . F 5 HOH A 97 997 100 HOH HOH . F 5 HOH A 98 998 63 HOH HOH . F 5 HOH A 99 999 53 HOH HOH . F 5 HOH A 100 1000 82 HOH HOH . F 5 HOH A 101 1001 97 HOH HOH . F 5 HOH A 102 1002 39 HOH HOH . F 5 HOH A 103 1003 96 HOH HOH . G 5 HOH B 1 301 98 HOH HOH . G 5 HOH B 2 302 41 HOH HOH . G 5 HOH B 3 303 105 HOH HOH . G 5 HOH B 4 304 32 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -19.048 _atom_site.Cartn_y 0.19 _atom_site.Cartn_z -23.867 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #