data_8FO7
#
_model_server_result.job_id            bSraJOgoMjnctvUQF_nemQ 
_model_server_result.datetime_utc      '2024-12-21 16:40:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fo7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2602}' 
#
_entry.id    8FO7 
#
_exptl.entry_id    8FO7 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              570.685 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[(2-methoxy-4-{[4-(4-methylpiperazin-1-yl)piperidin-1-yl]carbonyl}phenyl)amino]-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FO7 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FO7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C31 H38 N8 O3' 
_chem_comp.formula_weight    570.685 
_chem_comp.id                4K4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[(2-methoxy-4-{[4-(4-methylpiperazin-1-yl)piperidin-1-yl]carbonyl}phenyl)amino]-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAO CAQ 4K4 sing 1 n n 
CAO CBK 4K4 sing 2 n n 
CAQ NBM 4K4 sing 3 n n 
CAT CAV 4K4 sing 4 n n 
CAT NBL 4K4 sing 5 n n 
CAV NBN 4K4 sing 6 n n 
OAE CBA 4K4 doub 7 n n 
CAB NBL 4K4 sing 8 n n 
NBL CAS 4K4 sing 9 n n 
NBN CBK 4K4 sing 10 n n 
NBN CAU 4K4 sing 11 n n 
CBK CAP 4K4 sing 12 n n 
NBM CBA 4K4 sing 13 n n 
NBM CAR 4K4 sing 14 n n 
CBA CBB 4K4 sing 15 n n 
CAP CAR 4K4 sing 16 n n 
CAS CAU 4K4 sing 17 n n 
CBB CAN 4K4 doub 18 n y 
CBB CAI 4K4 sing 19 n y 
CAN CBE 4K4 sing 20 n y 
CAI CAJ 4K4 doub 21 n y 
CAA OAZ 4K4 sing 22 n n 
CBE OAZ 4K4 sing 23 n n 
CBE CBC 4K4 doub 24 n y 
CAJ CBC 4K4 sing 25 n y 
CBC NAY 4K4 sing 26 n n 
NAY C2 4K4 sing 27 n n 
C2 N3 4K4 doub 28 n y 
C2 N1 4K4 sing 29 n y 
N3 C4 4K4 sing 30 n y 
CAL CAH 4K4 doub 31 n y 
CAL CBH 4K4 sing 32 n y 
N1 C6 4K4 doub 33 n y 
CAD NBP 4K4 sing 34 n n 
CAH CAG 4K4 sing 35 n y 
C4 NBP 4K4 sing 36 n n 
C4 C5 4K4 doub 37 n y 
NBP CBH 4K4 sing 38 n n 
CBH CBG 4K4 doub 39 n y 
C6 C5 4K4 sing 40 n y 
CAG CAK 4K4 doub 41 n y 
C5 NBO 4K4 sing 42 n n 
CBG CAK 4K4 sing 43 n y 
CBG CBF 4K4 sing 44 n n 
NBO CBF 4K4 sing 45 n n 
NBO CAC 4K4 sing 46 n n 
CBF OAF 4K4 doub 47 n n 
C6 H1 4K4 sing 48 n n 
CAU H2 4K4 sing 49 n n 
CAU H3 4K4 sing 50 n n 
CAS H4 4K4 sing 51 n n 
CAS H5 4K4 sing 52 n n 
CAB H7 4K4 sing 53 n n 
CAB H8 4K4 sing 54 n n 
CAB H9 4K4 sing 55 n n 
CAT H10 4K4 sing 56 n n 
CAT H11 4K4 sing 57 n n 
CAV H12 4K4 sing 58 n n 
CAV H13 4K4 sing 59 n n 
CBK H15 4K4 sing 60 n n 
CAP H16 4K4 sing 61 n n 
CAP H17 4K4 sing 62 n n 
CAR H18 4K4 sing 63 n n 
CAR H19 4K4 sing 64 n n 
CAO H20 4K4 sing 65 n n 
CAO H21 4K4 sing 66 n n 
CAQ H22 4K4 sing 67 n n 
CAQ H23 4K4 sing 68 n n 
CAN H24 4K4 sing 69 n n 
CAA H25 4K4 sing 70 n n 
CAA H26 4K4 sing 71 n n 
CAA H27 4K4 sing 72 n n 
CAI H28 4K4 sing 73 n n 
CAJ H29 4K4 sing 74 n n 
NAY H30 4K4 sing 75 n n 
CAD H31 4K4 sing 76 n n 
CAD H32 4K4 sing 77 n n 
CAD H33 4K4 sing 78 n n 
CAL H34 4K4 sing 79 n n 
CAH H35 4K4 sing 80 n n 
CAG H36 4K4 sing 81 n n 
CAK H37 4K4 sing 82 n n 
CAC H38 4K4 sing 83 n n 
CAC H39 4K4 sing 84 n n 
CAC H40 4K4 sing 85 n n 
#
_atom_sites.entry_id                     8FO7 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP C 1 2601 2602 GDP GDP . 
C 3 4K4 C 1 2602 2603 4K4 4K4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 4K4 . . . C 3 208.189 167.35 199.282 1 4.38 ? C4 4K4 2602 C 1 
HETATM 2 C C5 4K4 . . . C 3 206.925 166.786 199.624 1 4.38 ? C5 4K4 2602 C 1 
HETATM 3 C C6 4K4 . . . C 3 206.414 165.844 198.692 1 4.38 ? C6 4K4 2602 C 1 
HETATM 4 N N1 4K4 . . . C 3 207.067 165.537 197.591 1 4.38 ? N1 4K4 2602 C 1 
HETATM 5 N N3 4K4 . . . C 3 208.812 167 198.138 1 4.38 ? N3 4K4 2602 C 1 
HETATM 6 C CAU 4K4 . . . C 3 219.085 163.484 196.014 1 4.38 ? CAU 4K4 2602 C 1 
HETATM 7 C CAS 4K4 . . . C 3 219.568 162.504 197.107 1 4.38 ? CAS 4K4 2602 C 1 
HETATM 8 N NBL 4K4 . . . C 3 220.494 163.219 198.037 1 4.38 ? NBL 4K4 2602 C 1 
HETATM 9 C CAB 4K4 . . . C 3 221.801 163.556 197.424 1 4.38 ? CAB 4K4 2602 C 1 
HETATM 10 C CAT 4K4 . . . C 3 219.851 164.413 198.654 1 4.38 ? CAT 4K4 2602 C 1 
HETATM 11 C CAV 4K4 . . . C 3 219.389 165.378 197.548 1 4.38 ? CAV 4K4 2602 C 1 
HETATM 12 N NBN 4K4 . . . C 3 218.438 164.687 196.641 1 4.38 ? NBN 4K4 2602 C 1 
HETATM 13 C CBK 4K4 . . . C 3 217.579 165.573 195.797 1 4.38 ? CBK 4K4 2602 C 1 
HETATM 14 C CAP 4K4 . . . C 3 216.18 165.669 196.455 1 4.38 ? CAP 4K4 2602 C 1 
HETATM 15 C CAR 4K4 . . . C 3 215.114 164.982 195.601 1 4.38 ? CAR 4K4 2602 C 1 
HETATM 16 C CAO 4K4 . . . C 3 217.593 165.205 194.285 1 4.38 ? CAO 4K4 2602 C 1 
HETATM 17 C CAQ 4K4 . . . C 3 216.319 165.595 193.51 1 4.38 ? CAQ 4K4 2602 C 1 
HETATM 18 N NBM 4K4 . . . C 3 215.087 165.549 194.266 1 4.38 ? NBM 4K4 2602 C 1 
HETATM 19 C CBA 4K4 . . . C 3 213.912 166.017 193.745 1 4.38 ? CBA 4K4 2602 C 1 
HETATM 20 O OAE 4K4 . . . C 3 213.939 166.495 192.574 1 4.38 ? OAE 4K4 2602 C 1 
HETATM 21 C CBB 4K4 . . . C 3 212.63 166.015 194.383 1 4.38 ? CBB 4K4 2602 C 1 
HETATM 22 C CAN 4K4 . . . C 3 211.829 164.883 194.304 1 4.38 ? CAN 4K4 2602 C 1 
HETATM 23 C CBE 4K4 . . . C 3 210.572 164.837 194.913 1 4.38 ? CBE 4K4 2602 C 1 
HETATM 24 O OAZ 4K4 . . . C 3 209.74 163.753 194.875 1 4.38 ? OAZ 4K4 2602 C 1 
HETATM 25 C CAA 4K4 . . . C 3 210.109 162.632 194.055 1 4.38 ? CAA 4K4 2602 C 1 
HETATM 26 C CAI 4K4 . . . C 3 212.127 167.125 195.107 1 4.38 ? CAI 4K4 2602 C 1 
HETATM 27 C CAJ 4K4 . . . C 3 210.87 167.084 195.722 1 4.38 ? CAJ 4K4 2602 C 1 
HETATM 28 C CBC 4K4 . . . C 3 210.078 165.931 195.625 1 4.38 ? CBC 4K4 2602 C 1 
HETATM 29 N NAY 4K4 . . . C 3 208.838 165.726 196.166 1 4.38 ? NAY 4K4 2602 C 1 
HETATM 30 C C2 4K4 . . . C 3 208.249 166.104 197.309 1 4.38 ? C2 4K4 2602 C 1 
HETATM 31 N NBP 4K4 . . . C 3 208.796 168.268 200.093 1 4.38 ? NBP 4K4 2602 C 1 
HETATM 32 C CAD 4K4 . . . C 3 210.236 168.255 200.045 1 4.38 ? CAD 4K4 2602 C 1 
HETATM 33 C CBH 4K4 . . . C 3 208.149 169.466 200.332 1 4.38 ? CBH 4K4 2602 C 1 
HETATM 34 C CAL 4K4 . . . C 3 208.768 170.677 199.929 1 4.38 ? CAL 4K4 2602 C 1 
HETATM 35 C CAH 4K4 . . . C 3 208.136 171.901 200.156 1 4.38 ? CAH 4K4 2602 C 1 
HETATM 36 C CAG 4K4 . . . C 3 206.891 171.957 200.776 1 4.38 ? CAG 4K4 2602 C 1 
HETATM 37 C CAK 4K4 . . . C 3 206.26 170.782 201.179 1 4.38 ? CAK 4K4 2602 C 1 
HETATM 38 C CBG 4K4 . . . C 3 206.878 169.538 200.957 1 4.38 ? CBG 4K4 2602 C 1 
HETATM 39 C CBF 4K4 . . . C 3 206.158 168.351 201.41 1 4.38 ? CBF 4K4 2602 C 1 
HETATM 40 O OAF 4K4 . . . C 3 205.46 168.493 202.443 1 4.38 ? OAF 4K4 2602 C 1 
HETATM 41 N NBO 4K4 . . . C 3 206.17 167.072 200.811 1 4.38 ? NBO 4K4 2602 C 1 
HETATM 42 C CAC 4K4 . . . C 3 205.387 166.02 201.404 1 4.38 ? CAC 4K4 2602 C 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           42 
#