data_8FOA # _model_server_result.job_id 0LE64BhAz9tJxOrHCIJFSQ _model_server_result.datetime_utc '2024-11-04 23:11:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8foa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":804}' # _entry.id 8FOA # _exptl.entry_id 8FOA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FOA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FOA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 P N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 IA N N ? 2 JA N N ? 2 KA N N ? 2 VA N N ? 2 WA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 542 A ASP 542 1_555 S CA CA . A CA 815 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc2 A OD2 ASP 542 A ASP 542 1_555 S CA CA . A CA 815 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc3 A NE2 HIS 582 A HIS 582 1_555 R ZN ZN . A ZN 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc4 A NE2 HIS 587 A HIS 587 1_555 R ZN ZN . A ZN 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc5 R ZN ZN . A ZN 814 1_555 D NE2 HIS 587 D HIS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc6 S CA CA . A CA 815 1_555 B OD1 ASP 542 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc7 S CA CA . A CA 815 1_555 B OD2 ASP 542 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc8 S CA CA . A CA 815 1_555 C OD1 ASP 542 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc9 S CA CA . A CA 815 1_555 C OD2 ASP 542 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc10 S CA CA . A CA 815 1_555 D OD1 ASP 542 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc11 S CA CA . A CA 815 1_555 D OD2 ASP 542 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc12 B NE2 HIS 587 B HIS 587 1_555 RA ZN ZN . C ZN 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc13 C NE2 HIS 582 C HIS 582 1_555 RA ZN ZN . C ZN 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc14 C NE2 HIS 587 C HIS 587 1_555 RA ZN ZN . C ZN 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 539 n n CBA CAB Y01 sing 540 n n CBA CAN Y01 sing 541 n n CAN CAJ Y01 sing 542 n n CAJ CAO Y01 sing 543 n n CAO CBB Y01 sing 544 n n CBB CAC Y01 sing 545 n n CBB CBE Y01 sing 546 n n CBE CAP Y01 sing 547 n n CBE CBI Y01 sing 548 n n CAP CAQ Y01 sing 549 n n CAQ CBG Y01 sing 550 n n CBG CBI Y01 sing 551 n n CBG CBD Y01 sing 552 n n CBI CAE Y01 sing 553 n n CBI CAU Y01 sing 554 n n CAU CAS Y01 sing 555 n n CAS CBF Y01 sing 556 n n CBF CBD Y01 sing 557 n n CBF CBH Y01 sing 558 n n CBD CAK Y01 sing 559 n n CAK CAI Y01 sing 560 n n CAI CAZ Y01 doub 561 n n CAZ CAV Y01 sing 562 n n CAZ CBH Y01 sing 563 n n CAV CBC Y01 sing 564 n n CBH CAD Y01 sing 565 n n CBH CAT Y01 sing 566 n n CAT CAR Y01 sing 567 n n CAR CBC Y01 sing 568 n n CBC OAW Y01 sing 569 n n OAW CAY Y01 sing 570 n n CAY OAG Y01 doub 571 n n CAY CAM Y01 sing 572 n n CAM CAL Y01 sing 573 n n CAL CAX Y01 sing 574 n n CAX OAH Y01 sing 575 n n CAX OAF Y01 doub 576 n n CAA HAA1 Y01 sing 577 n n CAA HAA2 Y01 sing 578 n n CAA HAA3 Y01 sing 579 n n CBA HBA Y01 sing 580 n n CAB HAB1 Y01 sing 581 n n CAB HAB2 Y01 sing 582 n n CAB HAB3 Y01 sing 583 n n CAN HAN1 Y01 sing 584 n n CAN HAN2 Y01 sing 585 n n CAJ HAJ1 Y01 sing 586 n n CAJ HAJ2 Y01 sing 587 n n CAO HAO1 Y01 sing 588 n n CAO HAO2 Y01 sing 589 n n CBB HBB Y01 sing 590 n n CAC HAC1 Y01 sing 591 n n CAC HAC2 Y01 sing 592 n n CAC HAC3 Y01 sing 593 n n CBE HBE Y01 sing 594 n n CAP HAP1 Y01 sing 595 n n CAP HAP2 Y01 sing 596 n n CAQ HAQ1 Y01 sing 597 n n CAQ HAQ2 Y01 sing 598 n n CBG HBG Y01 sing 599 n n CBD HBD Y01 sing 600 n n CAE HAE1 Y01 sing 601 n n CAE HAE2 Y01 sing 602 n n CAE HAE3 Y01 sing 603 n n CAU HAU1 Y01 sing 604 n n CAU HAU2 Y01 sing 605 n n CAS HAS1 Y01 sing 606 n n CAS HAS2 Y01 sing 607 n n CBF HBF Y01 sing 608 n n CAK HAK1 Y01 sing 609 n n CAK HAK2 Y01 sing 610 n n CAI HAI Y01 sing 611 n n CAV HAV1 Y01 sing 612 n n CAV HAV2 Y01 sing 613 n n CBC HBC Y01 sing 614 n n CAD HAD1 Y01 sing 615 n n CAD HAD2 Y01 sing 616 n n CAD HAD3 Y01 sing 617 n n CAT HAT1 Y01 sing 618 n n CAT HAT2 Y01 sing 619 n n CAR HAR1 Y01 sing 620 n n CAR HAR2 Y01 sing 621 n n CAM HAM1 Y01 sing 622 n n CAM HAM2 Y01 sing 623 n n CAL HAL1 Y01 sing 624 n n CAL HAL2 Y01 sing 625 n n OAH HAH Y01 sing 626 n n # _atom_sites.entry_id 8FOA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Y01 A 1 801 801 Y01 Y01 . F 2 Y01 A 1 802 802 Y01 Y01 . G 2 Y01 A 1 803 803 Y01 Y01 . H 3 POV A 1 804 806 POV POV . I 3 POV A 1 805 807 POV POV . J 3 POV A 1 806 808 POV POV . K 3 POV A 1 807 809 POV POV . L 3 POV A 1 808 811 POV POV . M 3 POV A 1 809 812 POV POV . N 3 POV A 1 810 805 POV POV . O 3 POV A 1 811 810 POV POV . P 2 Y01 A 1 812 803 Y01 Y01 . Q 3 POV A 1 813 804 POV POV . R 4 ZN A 1 814 2 ZN ZN . S 5 CA A 1 815 901 CA CA . T 6 GEN A 1 816 902 GEN GEN . U 3 POV B 1 801 804 POV POV . V 2 Y01 B 1 802 801 Y01 Y01 . W 2 Y01 B 1 803 802 Y01 Y01 . X 2 Y01 B 1 804 803 Y01 Y01 . Y 3 POV B 1 805 806 POV POV . Z 3 POV B 1 806 807 POV POV . AA 3 POV B 1 807 808 POV POV . BA 3 POV B 1 808 809 POV POV . CA 3 POV B 1 809 811 POV POV . DA 3 POV B 1 810 812 POV POV . EA 3 POV B 1 811 805 POV POV . FA 3 POV B 1 812 807 POV POV . GA 3 POV B 1 813 810 POV POV . HA 3 POV C 1 801 804 POV POV . IA 2 Y01 C 1 802 801 Y01 Y01 . JA 2 Y01 C 1 803 802 Y01 Y01 . KA 2 Y01 C 1 804 803 Y01 Y01 . LA 3 POV C 1 805 806 POV POV . MA 3 POV C 1 806 808 POV POV . NA 3 POV C 1 807 809 POV POV . OA 3 POV C 1 808 811 POV POV . PA 3 POV C 1 809 812 POV POV . QA 3 POV C 1 810 810 POV POV . RA 4 ZN C 1 811 1 ZN ZN . SA 3 POV D 1 801 805 POV POV . TA 3 POV D 1 802 810 POV POV . UA 3 POV D 1 803 804 POV POV . VA 2 Y01 D 1 804 801 Y01 Y01 . WA 2 Y01 D 1 805 802 Y01 Y01 . XA 3 POV D 1 806 805 POV POV . YA 3 POV D 1 807 806 POV POV . ZA 3 POV D 1 808 807 POV POV . AB 3 POV D 1 809 808 POV POV . BB 3 POV D 1 810 809 POV POV . CB 3 POV D 1 811 811 POV POV . DB 3 POV D 1 812 812 POV POV . EB 6 GEN D 1 813 903 GEN GEN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . X 2 124.488 89.886 90.185 1 25.08 ? CAA Y01 804 B 1 HETATM 2 C CBA Y01 . . . X 2 123.701 90.799 91.133 1 25.08 ? CBA Y01 804 B 1 HETATM 3 C CAB Y01 . . . X 2 124.29 90.747 92.553 1 25.08 ? CAB Y01 804 B 1 HETATM 4 C CAN Y01 . . . X 2 123.641 92.271 90.604 1 25.08 ? CAN Y01 804 B 1 HETATM 5 C CAJ Y01 . . . X 2 123.297 92.34 89.083 1 25.08 ? CAJ Y01 804 B 1 HETATM 6 C CAO Y01 . . . X 2 122.638 93.709 88.615 1 25.08 ? CAO Y01 804 B 1 HETATM 7 C CBB Y01 . . . X 2 123.325 94.377 87.329 1 25.08 ? CBB Y01 804 B 1 HETATM 8 C CAC Y01 . . . X 2 124.846 94.324 87.654 1 25.08 ? CAC Y01 804 B 1 HETATM 9 C CBE Y01 . . . X 2 122.951 93.768 86.041 1 25.08 ? CBE Y01 804 B 1 HETATM 10 C CAP Y01 . . . X 2 121.49 93.307 86.09 1 25.08 ? CAP Y01 804 B 1 HETATM 11 C CAQ Y01 . . . X 2 121.022 93.015 84.452 1 25.08 ? CAQ Y01 804 B 1 HETATM 12 C CBG Y01 . . . X 2 121.922 94.049 83.535 1 25.08 ? CBG Y01 804 B 1 HETATM 13 C CBI Y01 . . . X 2 122.904 94.792 84.678 1 25.08 ? CBI Y01 804 B 1 HETATM 14 C CAE Y01 . . . X 2 122.259 96.11 85.191 1 25.08 ? CAE Y01 804 B 1 HETATM 15 C CAU Y01 . . . X 2 124.117 95.044 84.243 1 25.08 ? CAU Y01 804 B 1 HETATM 16 C CAS Y01 . . . X 2 124.472 94.918 82.867 1 25.08 ? CAS Y01 804 B 1 HETATM 17 C CBF Y01 . . . X 2 123.254 94.722 82.017 1 25.08 ? CBF Y01 804 B 1 HETATM 18 C CBD Y01 . . . X 2 122.387 93.672 82.546 1 25.08 ? CBD Y01 804 B 1 HETATM 19 C CAK Y01 . . . X 2 121.6 93.23 81.794 1 25.08 ? CAK Y01 804 B 1 HETATM 20 C CAI Y01 . . . X 2 121.946 93.125 80.295 1 25.08 ? CAI Y01 804 B 1 HETATM 21 C CAZ Y01 . . . X 2 122.663 94.248 79.781 1 25.08 ? CAZ Y01 804 B 1 HETATM 22 C CAV Y01 . . . X 2 123.289 94.014 77.981 1 25.08 ? CAV Y01 804 B 1 HETATM 23 C CBH Y01 . . . X 2 123.386 94.889 80.538 1 25.08 ? CBH Y01 804 B 1 HETATM 24 C CAD Y01 . . . X 2 123.037 96.383 80.522 1 25.08 ? CAD Y01 804 B 1 HETATM 25 C CAT Y01 . . . X 2 125.119 94.593 80.149 1 25.08 ? CAT Y01 804 B 1 HETATM 26 C CAR Y01 . . . X 2 125.536 94.59 78.6 1 25.08 ? CAR Y01 804 B 1 HETATM 27 C CBC Y01 . . . X 2 124.453 94.84 77.677 1 25.08 ? CBC Y01 804 B 1 HETATM 28 O OAW Y01 . . . X 2 124.884 94.872 76.24 1 25.08 ? OAW Y01 804 B 1 HETATM 29 C CAY Y01 . . . X 2 124.836 93.675 75.425 1 25.08 ? CAY Y01 804 B 1 HETATM 30 O OAG Y01 . . . X 2 125.253 92.638 75.811 1 25.08 ? OAG Y01 804 B 1 HETATM 31 C CAM Y01 . . . X 2 124.261 93.796 73.993 1 25.08 ? CAM Y01 804 B 1 HETATM 32 C CAL Y01 . . . X 2 123.188 94.904 73.86 1 25.08 ? CAL Y01 804 B 1 HETATM 33 C CAX Y01 . . . X 2 122.827 95.112 72.384 1 25.08 ? CAX Y01 804 B 1 HETATM 34 O OAH Y01 . . . X 2 122.837 96.27 71.891 1 25.08 ? OAH Y01 804 B 1 HETATM 35 O OAF Y01 . . . X 2 122.533 94.13 71.662 1 25.08 ? OAF Y01 804 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #