data_8FOL # _model_server_result.job_id h6DW3U7VWUMcv1GAu7Lp4A _model_server_result.datetime_utc '2024-10-20 03:31:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fol # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8FOL # _exptl.entry_id 8FOL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FOL _cell.length_a 49.653 _cell.length_b 59.011 _cell.length_c 96.792 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 29 A CYS 29 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc2 A SG CYS 33 A CYS 33 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc3 A SG CYS 36 A CYS 36 1_555 B FE3 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc4 A OD1 ASP 104 A ASP 104 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc5 A O THR 105 A THR 105 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.378 ? metalc ? metalc6 A O MET 127 A MET 127 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.061 ? metalc ? metalc7 A OD1 ASP 129 A ASP 129 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc8 B FE2 SF4 . A SF4 301 1_555 C N SAM . A SAM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc9 B FE2 SF4 . A SF4 301 1_555 C O SAM . A SAM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc10 C OXT SAM . A SAM 302 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 341 n n FE1 S3 SF4 sing 342 n n FE1 S4 SF4 sing 343 n n FE2 S1 SF4 sing 344 n n FE2 S3 SF4 sing 345 n n FE2 S4 SF4 sing 346 n n FE3 S1 SF4 sing 347 n n FE3 S2 SF4 sing 348 n n FE3 S4 SF4 sing 349 n n FE4 S1 SF4 sing 350 n n FE4 S2 SF4 sing 351 n n FE4 S3 SF4 sing 352 n n # _atom_sites.entry_id 8FOL _atom_sites.fract_transf_matrix[1][1] 0.02014 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 500 SF4 SF4 . C 3 SAM A 1 302 501 SAM SAM . D 4 K A 1 303 502 K K . E 5 CL A 1 304 1 CL CL . F 5 CL A 1 305 2 CL CL . G 5 CL A 1 306 3 CL CL . H 6 HOH A 1 401 6 HOH HOH . H 6 HOH A 2 402 2 HOH HOH . H 6 HOH A 3 403 1 HOH HOH . H 6 HOH A 4 404 10 HOH HOH . H 6 HOH A 5 405 3 HOH HOH . H 6 HOH A 6 406 4 HOH HOH . H 6 HOH A 7 407 15 HOH HOH . H 6 HOH A 8 408 13 HOH HOH . H 6 HOH A 9 409 17 HOH HOH . H 6 HOH A 10 410 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 46.654 67.839 18.164 1 47.23 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . . . B 2 48.111 66.405 19.993 1 57.47 ? FE2 SF4 301 A 1 HETATM 3 FE FE3 SF4 . . . B 2 45.384 66.564 20.22 1 47.51 ? FE3 SF4 301 A 1 HETATM 4 FE FE4 SF4 . . . B 2 46.935 68.768 20.725 1 46.33 ? FE4 SF4 301 A 1 HETATM 5 S S1 SF4 . . . B 2 46.911 66.815 21.897 1 45.24 ? S1 SF4 301 A 1 HETATM 6 S S2 SF4 . . . B 2 45.014 68.689 19.491 1 41.25 ? S2 SF4 301 A 1 HETATM 7 S S3 SF4 . . . B 2 48.589 68.482 19.181 1 44.36 ? S3 SF4 301 A 1 HETATM 8 S S4 SF4 . . . B 2 46.557 65.591 18.531 1 39.62 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 8 #