data_8FP5 # _model_server_result.job_id jtXCkG0oMaH5FXfPdBNPIQ _model_server_result.datetime_utc '2024-11-22 21:26:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fp5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8FP5 # _exptl.entry_id 8FP5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FP5 _cell.length_a 53.67 _cell.length_b 71.71 _cell.length_c 72.04 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FP5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 132 A ASN 132 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc2 A OD2 ASP 145 A ASP 145 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc3 C O2G ATP . A ATP 302 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc4 C O1B ATP . A ATP 302 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc5 C O2A ATP . A ATP 302 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc6 D MG MG . A MG 303 1_555 E O HOH . A HOH 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 132 n n C1 C2 EDO sing 133 n n C1 H11 EDO sing 134 n n C1 H12 EDO sing 135 n n O1 HO1 EDO sing 136 n n C2 O2 EDO sing 137 n n C2 H21 EDO sing 138 n n C2 H22 EDO sing 139 n n O2 HO2 EDO sing 140 n n # _atom_sites.entry_id 8FP5 _atom_sites.fract_transf_matrix[1][1] 0.018632 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013945 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 301 EDO EDO . C 3 ATP A 1 302 1 ATP ATP . D 4 MG A 1 303 1 MG Mg . E 5 HOH A 1 401 93 HOH HOH . E 5 HOH A 2 402 69 HOH HOH . E 5 HOH A 3 403 118 HOH HOH . E 5 HOH A 4 404 105 HOH HOH . E 5 HOH A 5 405 43 HOH HOH . E 5 HOH A 6 406 91 HOH HOH . E 5 HOH A 7 407 94 HOH HOH . E 5 HOH A 8 408 95 HOH HOH . E 5 HOH A 9 409 31 HOH HOH . E 5 HOH A 10 410 136 HOH HOH . E 5 HOH A 11 411 79 HOH HOH . E 5 HOH A 12 412 108 HOH HOH . E 5 HOH A 13 413 35 HOH HOH . E 5 HOH A 14 414 32 HOH HOH . E 5 HOH A 15 415 49 HOH HOH . E 5 HOH A 16 416 86 HOH HOH . E 5 HOH A 17 417 84 HOH HOH . E 5 HOH A 18 418 92 HOH HOH . E 5 HOH A 19 419 53 HOH HOH . E 5 HOH A 20 420 50 HOH HOH . E 5 HOH A 21 421 28 HOH HOH . E 5 HOH A 22 422 75 HOH HOH . E 5 HOH A 23 423 56 HOH HOH . E 5 HOH A 24 424 18 HOH HOH . E 5 HOH A 25 425 73 HOH HOH . E 5 HOH A 26 426 61 HOH HOH . E 5 HOH A 27 427 34 HOH HOH . E 5 HOH A 28 428 122 HOH HOH . E 5 HOH A 29 429 110 HOH HOH . E 5 HOH A 30 430 47 HOH HOH . E 5 HOH A 31 431 148 HOH HOH . E 5 HOH A 32 432 29 HOH HOH . E 5 HOH A 33 433 72 HOH HOH . E 5 HOH A 34 434 52 HOH HOH . E 5 HOH A 35 435 62 HOH HOH . E 5 HOH A 36 436 134 HOH HOH . E 5 HOH A 37 437 114 HOH HOH . E 5 HOH A 38 438 58 HOH HOH . E 5 HOH A 39 439 30 HOH HOH . E 5 HOH A 40 440 82 HOH HOH . E 5 HOH A 41 441 115 HOH HOH . E 5 HOH A 42 442 55 HOH HOH . E 5 HOH A 43 443 16 HOH HOH . E 5 HOH A 44 444 100 HOH HOH . E 5 HOH A 45 445 141 HOH HOH . E 5 HOH A 46 446 102 HOH HOH . E 5 HOH A 47 447 23 HOH HOH . E 5 HOH A 48 448 40 HOH HOH . E 5 HOH A 49 449 88 HOH HOH . E 5 HOH A 50 450 81 HOH HOH . E 5 HOH A 51 451 11 HOH HOH . E 5 HOH A 52 452 59 HOH HOH . E 5 HOH A 53 453 15 HOH HOH . E 5 HOH A 54 454 135 HOH HOH . E 5 HOH A 55 455 123 HOH HOH . E 5 HOH A 56 456 51 HOH HOH . E 5 HOH A 57 457 13 HOH HOH . E 5 HOH A 58 458 96 HOH HOH . E 5 HOH A 59 459 85 HOH HOH . E 5 HOH A 60 460 38 HOH HOH . E 5 HOH A 61 461 12 HOH HOH . E 5 HOH A 62 462 80 HOH HOH . E 5 HOH A 63 463 113 HOH HOH . E 5 HOH A 64 464 132 HOH HOH . E 5 HOH A 65 465 70 HOH HOH . E 5 HOH A 66 466 10 HOH HOH . E 5 HOH A 67 467 107 HOH HOH . E 5 HOH A 68 468 66 HOH HOH . E 5 HOH A 69 469 130 HOH HOH . E 5 HOH A 70 470 1 HOH HOH . E 5 HOH A 71 471 120 HOH HOH . E 5 HOH A 72 472 9 HOH HOH . E 5 HOH A 73 473 5 HOH HOH . E 5 HOH A 74 474 45 HOH HOH . E 5 HOH A 75 475 145 HOH HOH . E 5 HOH A 76 476 137 HOH HOH . E 5 HOH A 77 477 37 HOH HOH . E 5 HOH A 78 478 27 HOH HOH . E 5 HOH A 79 479 19 HOH HOH . E 5 HOH A 80 480 131 HOH HOH . E 5 HOH A 81 481 139 HOH HOH . E 5 HOH A 82 482 48 HOH HOH . E 5 HOH A 83 483 22 HOH HOH . E 5 HOH A 84 484 8 HOH HOH . E 5 HOH A 85 485 83 HOH HOH . E 5 HOH A 86 486 71 HOH HOH . E 5 HOH A 87 487 14 HOH HOH . E 5 HOH A 88 488 98 HOH HOH . E 5 HOH A 89 489 124 HOH HOH . E 5 HOH A 90 490 60 HOH HOH . E 5 HOH A 91 491 17 HOH HOH . E 5 HOH A 92 492 3 HOH HOH . E 5 HOH A 93 493 147 HOH HOH . E 5 HOH A 94 494 74 HOH HOH . E 5 HOH A 95 495 90 HOH HOH . E 5 HOH A 96 496 36 HOH HOH . E 5 HOH A 97 497 7 HOH HOH . E 5 HOH A 98 498 2 HOH HOH . E 5 HOH A 99 499 65 HOH HOH . E 5 HOH A 100 500 121 HOH HOH . E 5 HOH A 101 501 26 HOH HOH . E 5 HOH A 102 502 21 HOH HOH . E 5 HOH A 103 503 4 HOH HOH . E 5 HOH A 104 504 99 HOH HOH . E 5 HOH A 105 505 104 HOH HOH . E 5 HOH A 106 506 116 HOH HOH . E 5 HOH A 107 507 54 HOH HOH . E 5 HOH A 108 508 46 HOH HOH . E 5 HOH A 109 509 57 HOH HOH . E 5 HOH A 110 510 142 HOH HOH . E 5 HOH A 111 511 133 HOH HOH . E 5 HOH A 112 512 20 HOH HOH . E 5 HOH A 113 513 140 HOH HOH . E 5 HOH A 114 514 25 HOH HOH . E 5 HOH A 115 515 117 HOH HOH . E 5 HOH A 116 516 33 HOH HOH . E 5 HOH A 117 517 39 HOH HOH . E 5 HOH A 118 518 6 HOH HOH . E 5 HOH A 119 519 129 HOH HOH . E 5 HOH A 120 520 127 HOH HOH . E 5 HOH A 121 521 41 HOH HOH . E 5 HOH A 122 522 128 HOH HOH . E 5 HOH A 123 523 125 HOH HOH . E 5 HOH A 124 524 24 HOH HOH . E 5 HOH A 125 525 101 HOH HOH . E 5 HOH A 126 526 144 HOH HOH . E 5 HOH A 127 527 67 HOH HOH . E 5 HOH A 128 528 64 HOH HOH . E 5 HOH A 129 529 143 HOH HOH . E 5 HOH A 130 530 109 HOH HOH . E 5 HOH A 131 531 44 HOH HOH . E 5 HOH A 132 532 138 HOH HOH . E 5 HOH A 133 533 68 HOH HOH . E 5 HOH A 134 534 112 HOH HOH . E 5 HOH A 135 535 97 HOH HOH . E 5 HOH A 136 536 146 HOH HOH . E 5 HOH A 137 537 103 HOH HOH . E 5 HOH A 138 538 77 HOH HOH . E 5 HOH A 139 539 63 HOH HOH . E 5 HOH A 140 540 89 HOH HOH . E 5 HOH A 141 541 111 HOH HOH . E 5 HOH A 142 542 78 HOH HOH . E 5 HOH A 143 543 76 HOH HOH . E 5 HOH A 144 544 106 HOH HOH . E 5 HOH A 145 545 87 HOH HOH . E 5 HOH A 146 546 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -10.436 4.413 33.011 1 34.28 ? C1 EDO 301 A 1 HETATM 2 O O1 EDO . . . B 2 -9.097 4.906 33.212 1 39.43 ? O1 EDO 301 A 1 HETATM 3 C C2 EDO . . . B 2 -10.415 3.305 31.969 1 37.76 ? C2 EDO 301 A 1 HETATM 4 O O2 EDO . . . B 2 -10.421 2.034 32.63 1 31.01 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #