data_8FPF # _model_server_result.job_id WVAe68Tf7DqzqPOG1-YQ3A _model_server_result.datetime_utc '2024-12-19 00:24:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fpf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 8FPF # _exptl.entry_id 8FPF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 25 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FPF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FPF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 307 n n N C13 POV sing 308 n n N C14 POV sing 309 n n N C15 POV sing 310 n n P O11 POV sing 311 n n P O12 POV sing 312 n n P O13 POV sing 313 n n P O14 POV doub 314 n n C1 C2 POV sing 315 n n C1 O11 POV sing 316 n n C1 H1 POV sing 317 n n C1 H1A POV sing 318 n n C2 C3 POV sing 319 n n C2 O21 POV sing 320 n n C2 H2 POV sing 321 n n C3 O31 POV sing 322 n n C3 H3 POV sing 323 n n C3 H3A POV sing 324 n n C210 C211 POV sing 325 n n C210 C29 POV doub 326 z n C210 H210 POV sing 327 n n C310 C311 POV sing 328 n n C310 C39 POV sing 329 n n C310 H310 POV sing 330 n n C310 H31A POV sing 331 n n C11 C12 POV sing 332 n n C11 O12 POV sing 333 n n C11 H11 POV sing 334 n n C11 H11A POV sing 335 n n C211 C212 POV sing 336 n n C211 H211 POV sing 337 n n C211 H21A POV sing 338 n n C311 C312 POV sing 339 n n C311 H311 POV sing 340 n n C311 H31B POV sing 341 n n C12 H12 POV sing 342 n n C12 H12A POV sing 343 n n C212 C213 POV sing 344 n n C212 H212 POV sing 345 n n C212 H21B POV sing 346 n n C312 C313 POV sing 347 n n C312 H312 POV sing 348 n n C312 H31C POV sing 349 n n C13 H13 POV sing 350 n n C13 H13A POV sing 351 n n C13 H13B POV sing 352 n n C213 C214 POV sing 353 n n C213 H213 POV sing 354 n n C213 H21C POV sing 355 n n C313 C314 POV sing 356 n n C313 H313 POV sing 357 n n C313 H31D POV sing 358 n n C14 H14 POV sing 359 n n C14 H14A POV sing 360 n n C14 H14B POV sing 361 n n C214 C215 POV sing 362 n n C214 H214 POV sing 363 n n C214 H21D POV sing 364 n n C314 C315 POV sing 365 n n C314 H314 POV sing 366 n n C314 H31E POV sing 367 n n C15 H15 POV sing 368 n n C15 H15A POV sing 369 n n C15 H15B POV sing 370 n n C215 C216 POV sing 371 n n C215 H215 POV sing 372 n n C215 H21E POV sing 373 n n C315 C316 POV sing 374 n n C315 H315 POV sing 375 n n C315 H31F POV sing 376 n n C216 C217 POV sing 377 n n C216 H216 POV sing 378 n n C216 H21F POV sing 379 n n C316 H316 POV sing 380 n n C316 H31G POV sing 381 n n C316 H31H POV sing 382 n n C217 C218 POV sing 383 n n C217 H217 POV sing 384 n n C217 H21G POV sing 385 n n C218 H218 POV sing 386 n n C218 H21H POV sing 387 n n C218 H21J POV sing 388 n n C21 O21 POV sing 389 n n C21 C22 POV sing 390 n n C21 O22 POV doub 391 n n C22 C23 POV sing 392 n n C22 H22 POV sing 393 n n C22 H22A POV sing 394 n n C23 C24 POV sing 395 n n C23 H23 POV sing 396 n n C23 H23A POV sing 397 n n C24 C25 POV sing 398 n n C24 H24 POV sing 399 n n C24 H24A POV sing 400 n n C25 C26 POV sing 401 n n C25 H25 POV sing 402 n n C25 H25A POV sing 403 n n C26 C27 POV sing 404 n n C26 H26 POV sing 405 n n C26 H26A POV sing 406 n n C27 C28 POV sing 407 n n C27 H27 POV sing 408 n n C27 H27A POV sing 409 n n C28 C29 POV sing 410 n n C28 H28 POV sing 411 n n C28 H28A POV sing 412 n n C29 H29 POV sing 413 n n C31 O31 POV sing 414 n n C31 C32 POV sing 415 n n C31 O32 POV doub 416 n n C32 C33 POV sing 417 n n C32 H32 POV sing 418 n n C32 H32A POV sing 419 n n C33 C34 POV sing 420 n n C33 H33 POV sing 421 n n C33 H33A POV sing 422 n n C34 C35 POV sing 423 n n C34 H34 POV sing 424 n n C34 H34A POV sing 425 n n C35 C36 POV sing 426 n n C35 H35 POV sing 427 n n C35 H35A POV sing 428 n n C36 C37 POV sing 429 n n C36 H36 POV sing 430 n n C36 H36A POV sing 431 n n C37 C38 POV sing 432 n n C37 H37 POV sing 433 n n C37 H37A POV sing 434 n n C38 C39 POV sing 435 n n C38 H38 POV sing 436 n n C38 H38A POV sing 437 n n C39 H39 POV sing 438 n n C39 H39A POV sing 439 n n # _atom_sites.entry_id 8FPF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 POV D 1 701 1 POV POV . D 3 POV D 1 702 2 POV POV . E 3 POV D 1 703 5 POV POV . F 3 POV D 1 704 6 POV POV . G 3 POV D 1 705 7 POV POV . H 3 POV D 1 706 8 POV POV . I 3 POV D 1 707 9 POV POV . J 3 POV D 1 708 10 POV POV . K 3 POV D 1 709 13 POV POV . L 3 POV D 1 710 14 POV POV . M 3 POV D 1 711 15 POV POV . N 3 POV D 1 712 16 POV POV . O 3 POV D 1 713 17 POV POV . P 3 POV D 1 714 22 POV POV . Q 4 ATP D 1 715 1 ATP ATP . R 3 POV C 1 601 3 POV POV . S 3 POV C 1 602 4 POV POV . T 3 POV C 1 603 11 POV POV . U 3 POV C 1 604 12 POV POV . V 3 POV C 1 605 18 POV POV . W 3 POV C 1 606 19 POV POV . X 3 POV C 1 607 20 POV POV . Y 3 POV C 1 608 21 POV POV . Z 3 POV C 1 609 23 POV POV . AA 3 POV C 1 610 24 POV POV . BA 3 POV C 1 611 25 POV POV . CA 4 ATP C 1 612 2 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C210 POV . . . D 3 158.26 145.39 182.654 1 46.37 ? C210 POV 702 D 1 HETATM 2 C C211 POV . . . D 3 157.959 145.313 181.196 1 46.37 ? C211 POV 702 D 1 HETATM 3 C C212 POV . . . D 3 158.605 144.146 180.541 1 46.37 ? C212 POV 702 D 1 HETATM 4 C C213 POV . . . D 3 158.594 144.187 179.026 1 46.37 ? C213 POV 702 D 1 HETATM 5 C C214 POV . . . D 3 157.227 144.06 178.422 1 46.37 ? C214 POV 702 D 1 HETATM 6 C C215 POV . . . D 3 157.231 143.95 176.926 1 46.37 ? C215 POV 702 D 1 HETATM 7 C C21 POV . . . D 3 164.283 144.103 190.472 1 46.37 ? C21 POV 702 D 1 HETATM 8 C C22 POV . . . D 3 162.824 144.059 190.121 1 46.37 ? C22 POV 702 D 1 HETATM 9 C C23 POV . . . D 3 162.546 144.5 188.727 1 46.37 ? C23 POV 702 D 1 HETATM 10 C C24 POV . . . D 3 161.063 144.599 188.422 1 46.37 ? C24 POV 702 D 1 HETATM 11 C C25 POV . . . D 3 160.737 145.337 187.151 1 46.37 ? C25 POV 702 D 1 HETATM 12 C C26 POV . . . D 3 160.812 144.509 185.906 1 46.37 ? C26 POV 702 D 1 HETATM 13 C C27 POV . . . D 3 160.64 145.281 184.605 1 46.37 ? C27 POV 702 D 1 HETATM 14 C C28 POV . . . D 3 159.524 146.266 184.585 1 46.37 ? C28 POV 702 D 1 HETATM 15 C C29 POV . . . D 3 158.879 146.365 183.244 1 46.37 ? C29 POV 702 D 1 HETATM 16 H H29 POV . . . D 3 158.931 147.321 182.725 1 46.37 ? H29 POV 702 D 1 HETATM 17 H H210 POV . . . D 3 157.933 144.558 183.276 1 46.37 ? H210 POV 702 D 1 HETATM 18 H H211 POV . . . D 3 156.881 145.254 181.054 1 46.37 ? H211 POV 702 D 1 HETATM 19 H H21A POV . . . D 3 158.294 146.229 180.711 1 46.37 ? H21A POV 702 D 1 HETATM 20 H H22 POV . . . D 3 162.455 143.043 190.255 1 46.37 ? H22 POV 702 D 1 HETATM 21 H H212 POV . . . D 3 159.637 144.08 180.882 1 46.37 ? H212 POV 702 D 1 HETATM 22 H H22A POV . . . D 3 162.271 144.692 190.813 1 46.37 ? H22A POV 702 D 1 HETATM 23 H H21B POV . . . D 3 158.103 143.238 180.87 1 46.37 ? H21B POV 702 D 1 HETATM 24 H H23 POV . . . D 3 163.011 145.47 188.559 1 46.37 ? H23 POV 702 D 1 HETATM 25 H H213 POV . . . D 3 159.04 145.124 178.695 1 46.37 ? H213 POV 702 D 1 HETATM 26 H H23A POV . . . D 3 163.008 143.801 188.032 1 46.37 ? H23A POV 702 D 1 HETATM 27 H H21C POV . . . D 3 159.223 143.383 178.647 1 46.37 ? H21C POV 702 D 1 HETATM 28 H H24 POV . . . D 3 160.65 143.593 188.36 1 46.37 ? H24 POV 702 D 1 HETATM 29 H H214 POV . . . D 3 156.737 143.182 178.839 1 46.37 ? H214 POV 702 D 1 HETATM 30 H H24A POV . . . D 3 160.566 145.096 189.254 1 46.37 ? H24A POV 702 D 1 HETATM 31 H H21D POV . . . D 3 156.631 144.925 178.711 1 46.37 ? H21D POV 702 D 1 HETATM 32 H H25 POV . . . D 3 159.733 145.75 187.235 1 46.37 ? H25 POV 702 D 1 HETATM 33 H H25A POV . . . D 3 161.42 146.179 187.052 1 46.37 ? H25A POV 702 D 1 HETATM 34 H H26 POV . . . D 3 161.775 144.001 185.884 1 46.37 ? H26 POV 702 D 1 HETATM 35 H H26A POV . . . D 3 160.046 143.737 185.956 1 46.37 ? H26A POV 702 D 1 HETATM 36 H H27 POV . . . D 3 161.569 145.807 184.39 1 46.37 ? H27 POV 702 D 1 HETATM 37 H H27A POV . . . D 3 160.485 144.567 183.798 1 46.37 ? H27A POV 702 D 1 HETATM 38 H H28 POV . . . D 3 158.777 145.98 185.324 1 46.37 ? H28 POV 702 D 1 HETATM 39 H H28A POV . . . D 3 159.902 147.245 184.877 1 46.37 ? H28A POV 702 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 66 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #