data_8FPF # _model_server_result.job_id eqgODmRX1nBiTRwgkZ_K4A _model_server_result.datetime_utc '2024-12-19 00:19:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fpf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":704}' # _entry.id 8FPF # _exptl.entry_id 8FPF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 25 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FPF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FPF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 307 n n N C13 POV sing 308 n n N C14 POV sing 309 n n N C15 POV sing 310 n n P O11 POV sing 311 n n P O12 POV sing 312 n n P O13 POV sing 313 n n P O14 POV doub 314 n n C1 C2 POV sing 315 n n C1 O11 POV sing 316 n n C1 H1 POV sing 317 n n C1 H1A POV sing 318 n n C2 C3 POV sing 319 n n C2 O21 POV sing 320 n n C2 H2 POV sing 321 n n C3 O31 POV sing 322 n n C3 H3 POV sing 323 n n C3 H3A POV sing 324 n n C210 C211 POV sing 325 n n C210 C29 POV doub 326 z n C210 H210 POV sing 327 n n C310 C311 POV sing 328 n n C310 C39 POV sing 329 n n C310 H310 POV sing 330 n n C310 H31A POV sing 331 n n C11 C12 POV sing 332 n n C11 O12 POV sing 333 n n C11 H11 POV sing 334 n n C11 H11A POV sing 335 n n C211 C212 POV sing 336 n n C211 H211 POV sing 337 n n C211 H21A POV sing 338 n n C311 C312 POV sing 339 n n C311 H311 POV sing 340 n n C311 H31B POV sing 341 n n C12 H12 POV sing 342 n n C12 H12A POV sing 343 n n C212 C213 POV sing 344 n n C212 H212 POV sing 345 n n C212 H21B POV sing 346 n n C312 C313 POV sing 347 n n C312 H312 POV sing 348 n n C312 H31C POV sing 349 n n C13 H13 POV sing 350 n n C13 H13A POV sing 351 n n C13 H13B POV sing 352 n n C213 C214 POV sing 353 n n C213 H213 POV sing 354 n n C213 H21C POV sing 355 n n C313 C314 POV sing 356 n n C313 H313 POV sing 357 n n C313 H31D POV sing 358 n n C14 H14 POV sing 359 n n C14 H14A POV sing 360 n n C14 H14B POV sing 361 n n C214 C215 POV sing 362 n n C214 H214 POV sing 363 n n C214 H21D POV sing 364 n n C314 C315 POV sing 365 n n C314 H314 POV sing 366 n n C314 H31E POV sing 367 n n C15 H15 POV sing 368 n n C15 H15A POV sing 369 n n C15 H15B POV sing 370 n n C215 C216 POV sing 371 n n C215 H215 POV sing 372 n n C215 H21E POV sing 373 n n C315 C316 POV sing 374 n n C315 H315 POV sing 375 n n C315 H31F POV sing 376 n n C216 C217 POV sing 377 n n C216 H216 POV sing 378 n n C216 H21F POV sing 379 n n C316 H316 POV sing 380 n n C316 H31G POV sing 381 n n C316 H31H POV sing 382 n n C217 C218 POV sing 383 n n C217 H217 POV sing 384 n n C217 H21G POV sing 385 n n C218 H218 POV sing 386 n n C218 H21H POV sing 387 n n C218 H21J POV sing 388 n n C21 O21 POV sing 389 n n C21 C22 POV sing 390 n n C21 O22 POV doub 391 n n C22 C23 POV sing 392 n n C22 H22 POV sing 393 n n C22 H22A POV sing 394 n n C23 C24 POV sing 395 n n C23 H23 POV sing 396 n n C23 H23A POV sing 397 n n C24 C25 POV sing 398 n n C24 H24 POV sing 399 n n C24 H24A POV sing 400 n n C25 C26 POV sing 401 n n C25 H25 POV sing 402 n n C25 H25A POV sing 403 n n C26 C27 POV sing 404 n n C26 H26 POV sing 405 n n C26 H26A POV sing 406 n n C27 C28 POV sing 407 n n C27 H27 POV sing 408 n n C27 H27A POV sing 409 n n C28 C29 POV sing 410 n n C28 H28 POV sing 411 n n C28 H28A POV sing 412 n n C29 H29 POV sing 413 n n C31 O31 POV sing 414 n n C31 C32 POV sing 415 n n C31 O32 POV doub 416 n n C32 C33 POV sing 417 n n C32 H32 POV sing 418 n n C32 H32A POV sing 419 n n C33 C34 POV sing 420 n n C33 H33 POV sing 421 n n C33 H33A POV sing 422 n n C34 C35 POV sing 423 n n C34 H34 POV sing 424 n n C34 H34A POV sing 425 n n C35 C36 POV sing 426 n n C35 H35 POV sing 427 n n C35 H35A POV sing 428 n n C36 C37 POV sing 429 n n C36 H36 POV sing 430 n n C36 H36A POV sing 431 n n C37 C38 POV sing 432 n n C37 H37 POV sing 433 n n C37 H37A POV sing 434 n n C38 C39 POV sing 435 n n C38 H38 POV sing 436 n n C38 H38A POV sing 437 n n C39 H39 POV sing 438 n n C39 H39A POV sing 439 n n # _atom_sites.entry_id 8FPF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 POV D 1 701 1 POV POV . D 3 POV D 1 702 2 POV POV . E 3 POV D 1 703 5 POV POV . F 3 POV D 1 704 6 POV POV . G 3 POV D 1 705 7 POV POV . H 3 POV D 1 706 8 POV POV . I 3 POV D 1 707 9 POV POV . J 3 POV D 1 708 10 POV POV . K 3 POV D 1 709 13 POV POV . L 3 POV D 1 710 14 POV POV . M 3 POV D 1 711 15 POV POV . N 3 POV D 1 712 16 POV POV . O 3 POV D 1 713 17 POV POV . P 3 POV D 1 714 22 POV POV . Q 4 ATP D 1 715 1 ATP ATP . R 3 POV C 1 601 3 POV POV . S 3 POV C 1 602 4 POV POV . T 3 POV C 1 603 11 POV POV . U 3 POV C 1 604 12 POV POV . V 3 POV C 1 605 18 POV POV . W 3 POV C 1 606 19 POV POV . X 3 POV C 1 607 20 POV POV . Y 3 POV C 1 608 21 POV POV . Z 3 POV C 1 609 23 POV POV . AA 3 POV C 1 610 24 POV POV . BA 3 POV C 1 611 25 POV POV . CA 4 ATP C 1 612 2 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C210 POV . . . F 3 136.281 166.302 194.587 1 59.78 ? C210 POV 704 D 1 HETATM 2 C C310 POV . . . F 3 136.451 164.321 191.857 1 59.78 ? C310 POV 704 D 1 HETATM 3 C C211 POV . . . F 3 137.228 166.957 193.635 1 59.78 ? C211 POV 704 D 1 HETATM 4 C C311 POV . . . F 3 136.335 163.539 190.582 1 59.78 ? C311 POV 704 D 1 HETATM 5 C C212 POV . . . F 3 137.391 168.423 193.864 1 59.78 ? C212 POV 704 D 1 HETATM 6 C C312 POV . . . F 3 137.532 163.661 189.682 1 59.78 ? C312 POV 704 D 1 HETATM 7 C C213 POV . . . F 3 138.194 169.134 192.795 1 59.78 ? C213 POV 704 D 1 HETATM 8 C C313 POV . . . F 3 137.939 162.38 189.01 1 59.78 ? C313 POV 704 D 1 HETATM 9 C C214 POV . . . F 3 137.591 169.072 191.419 1 59.78 ? C214 POV 704 D 1 HETATM 10 C C314 POV . . . F 3 138.954 162.566 187.911 1 59.78 ? C314 POV 704 D 1 HETATM 11 C C215 POV . . . F 3 138.484 168.446 190.384 1 59.78 ? C215 POV 704 D 1 HETATM 12 C C315 POV . . . F 3 140.338 162.936 188.37 1 59.78 ? C315 POV 704 D 1 HETATM 13 C C216 POV . . . F 3 138.704 166.969 190.564 1 59.78 ? C216 POV 704 D 1 HETATM 14 C C316 POV . . . F 3 141.201 163.504 187.278 1 59.78 ? C316 POV 704 D 1 HETATM 15 C C217 POV . . . F 3 139.699 166.38 189.614 1 59.78 ? C217 POV 704 D 1 HETATM 16 C C218 POV . . . F 3 139.227 166.393 188.184 1 59.78 ? C218 POV 704 D 1 HETATM 17 C C26 POV . . . F 3 137.687 166.958 198.714 1 59.78 ? C26 POV 704 D 1 HETATM 18 C C27 POV . . . F 3 137.447 167.862 197.515 1 59.78 ? C27 POV 704 D 1 HETATM 19 C C28 POV . . . F 3 136.221 167.52 196.742 1 59.78 ? C28 POV 704 D 1 HETATM 20 C C29 POV . . . F 3 136.384 166.31 195.88 1 59.78 ? C29 POV 704 D 1 HETATM 21 C C35 POV . . . F 3 136.485 161.704 197.261 1 59.78 ? C35 POV 704 D 1 HETATM 22 C C36 POV . . . F 3 136.249 162.627 196.091 1 59.78 ? C36 POV 704 D 1 HETATM 23 C C37 POV . . . F 3 135.79 161.93 194.837 1 59.78 ? C37 POV 704 D 1 HETATM 24 C C38 POV . . . F 3 135.503 162.858 193.685 1 59.78 ? C38 POV 704 D 1 HETATM 25 C C39 POV . . . F 3 136.731 163.473 193.065 1 59.78 ? C39 POV 704 D 1 HETATM 26 H H29 POV . . . F 3 136.606 165.365 196.374 1 59.78 ? H29 POV 704 D 1 HETATM 27 H H310 POV . . . F 3 137.246 165.057 191.749 1 59.78 ? H310 POV 704 D 1 HETATM 28 H H31A POV . . . F 3 135.526 164.873 192.019 1 59.78 ? H31A POV 704 D 1 HETATM 29 H H210 POV . . . F 3 135.431 165.772 194.159 1 59.78 ? H210 POV 704 D 1 HETATM 30 H H211 POV . . . F 3 138.201 166.475 193.716 1 59.78 ? H211 POV 704 D 1 HETATM 31 H H21A POV . . . F 3 136.876 166.794 192.617 1 59.78 ? H21A POV 704 D 1 HETATM 32 H H311 POV . . . F 3 136.181 162.489 190.825 1 59.78 ? H311 POV 704 D 1 HETATM 33 H H31B POV . . . F 3 135.451 163.874 190.041 1 59.78 ? H31B POV 704 D 1 HETATM 34 H H212 POV . . . F 3 136.405 168.881 193.926 1 59.78 ? H212 POV 704 D 1 HETATM 35 H H21B POV . . . F 3 137.875 168.577 194.828 1 59.78 ? H21B POV 704 D 1 HETATM 36 H H312 POV . . . F 3 137.321 164.406 188.917 1 59.78 ? H312 POV 704 D 1 HETATM 37 H H31C POV . . . F 3 138.373 164.033 190.266 1 59.78 ? H31C POV 704 D 1 HETATM 38 H H213 POV . . . F 3 138.31 170.179 193.08 1 59.78 ? H213 POV 704 D 1 HETATM 39 H H21C POV . . . F 3 139.192 168.701 192.76 1 59.78 ? H21C POV 704 D 1 HETATM 40 H H313 POV . . . F 3 138.348 161.702 189.758 1 59.78 ? H313 POV 704 D 1 HETATM 41 H H31D POV . . . F 3 137.053 161.901 188.596 1 59.78 ? H31D POV 704 D 1 HETATM 42 H H214 POV . . . F 3 136.66 168.509 191.468 1 59.78 ? H214 POV 704 D 1 HETATM 43 H H21D POV . . . F 3 137.336 170.082 191.1 1 59.78 ? H21D POV 704 D 1 HETATM 44 H H314 POV . . . F 3 139.015 161.643 187.336 1 59.78 ? H314 POV 704 D 1 HETATM 45 H H31E POV . . . F 3 138.595 163.34 187.235 1 59.78 ? H31E POV 704 D 1 HETATM 46 H H215 POV . . . F 3 138.054 168.619 189.399 1 59.78 ? H215 POV 704 D 1 HETATM 47 H H21E POV . . . F 3 139.449 168.949 190.403 1 59.78 ? H21E POV 704 D 1 HETATM 48 H H315 POV . . . F 3 140.262 163.663 189.177 1 59.78 ? H315 POV 704 D 1 HETATM 49 H H31F POV . . . F 3 140.823 162.053 188.783 1 59.78 ? H31F POV 704 D 1 HETATM 50 H H216 POV . . . F 3 139.038 166.784 191.584 1 59.78 ? H216 POV 704 D 1 HETATM 51 H H21F POV . . . F 3 137.752 166.453 190.442 1 59.78 ? H21F POV 704 D 1 HETATM 52 H H36 POV . . . F 3 135.504 163.37 196.373 1 59.78 ? H36 POV 704 D 1 HETATM 53 H H316 POV . . . F 3 142.18 163.745 187.689 1 59.78 ? H316 POV 704 D 1 HETATM 54 H H36A POV . . . F 3 137.171 163.166 195.877 1 59.78 ? H36A POV 704 D 1 HETATM 55 H H31G POV . . . F 3 141.303 162.764 186.485 1 59.78 ? H31G POV 704 D 1 HETATM 56 H H31H POV . . . F 3 140.731 164.405 186.887 1 59.78 ? H31H POV 704 D 1 HETATM 57 H H27 POV . . . F 3 137.373 168.893 197.858 1 59.78 ? H27 POV 704 D 1 HETATM 58 H H217 POV . . . F 3 140.634 166.934 189.687 1 59.78 ? H217 POV 704 D 1 HETATM 59 H H27A POV . . . F 3 138.31 167.808 196.853 1 59.78 ? H27A POV 704 D 1 HETATM 60 H H21G POV . . . F 3 139.913 165.354 189.911 1 59.78 ? H21G POV 704 D 1 HETATM 61 H H37 POV . . . F 3 136.553 161.216 194.532 1 59.78 ? H37 POV 704 D 1 HETATM 62 H H37A POV . . . F 3 134.891 161.358 195.061 1 59.78 ? H37A POV 704 D 1 HETATM 63 H H28 POV . . . F 3 135.397 167.355 197.435 1 59.78 ? H28 POV 704 D 1 HETATM 64 H H218 POV . . . F 3 139.997 165.952 187.553 1 59.78 ? H218 POV 704 D 1 HETATM 65 H H28A POV . . . F 3 135.946 168.368 196.117 1 59.78 ? H28A POV 704 D 1 HETATM 66 H H21H POV . . . F 3 138.308 165.814 188.109 1 59.78 ? H21H POV 704 D 1 HETATM 67 H H21J POV . . . F 3 139.043 167.423 187.881 1 59.78 ? H21J POV 704 D 1 HETATM 68 H H38 POV . . . F 3 134.959 162.309 192.918 1 59.78 ? H38 POV 704 D 1 HETATM 69 H H38A POV . . . F 3 134.847 163.655 194.031 1 59.78 ? H38A POV 704 D 1 HETATM 70 H H39 POV . . . F 3 137.42 162.677 192.785 1 59.78 ? H39 POV 704 D 1 HETATM 71 H H39A POV . . . F 3 137.236 164.082 193.813 1 59.78 ? H39A POV 704 D 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 97 _model_server_stats.query_time_ms 406 _model_server_stats.encode_time_ms 27 _model_server_stats.element_count 71 #