data_8FPF
#
_model_server_result.job_id            0aKP4soebwth2nAcWySCJQ 
_model_server_result.datetime_utc      '2024-12-18 23:50:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fpf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":708}' 
#
_entry.id    8FPF 
#
_exptl.entry_id    8FPF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    25 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FPF 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FPF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 307 n n 
N C13 POV sing 308 n n 
N C14 POV sing 309 n n 
N C15 POV sing 310 n n 
P O11 POV sing 311 n n 
P O12 POV sing 312 n n 
P O13 POV sing 313 n n 
P O14 POV doub 314 n n 
C1 C2 POV sing 315 n n 
C1 O11 POV sing 316 n n 
C1 H1 POV sing 317 n n 
C1 H1A POV sing 318 n n 
C2 C3 POV sing 319 n n 
C2 O21 POV sing 320 n n 
C2 H2 POV sing 321 n n 
C3 O31 POV sing 322 n n 
C3 H3 POV sing 323 n n 
C3 H3A POV sing 324 n n 
C210 C211 POV sing 325 n n 
C210 C29 POV doub 326 z n 
C210 H210 POV sing 327 n n 
C310 C311 POV sing 328 n n 
C310 C39 POV sing 329 n n 
C310 H310 POV sing 330 n n 
C310 H31A POV sing 331 n n 
C11 C12 POV sing 332 n n 
C11 O12 POV sing 333 n n 
C11 H11 POV sing 334 n n 
C11 H11A POV sing 335 n n 
C211 C212 POV sing 336 n n 
C211 H211 POV sing 337 n n 
C211 H21A POV sing 338 n n 
C311 C312 POV sing 339 n n 
C311 H311 POV sing 340 n n 
C311 H31B POV sing 341 n n 
C12 H12 POV sing 342 n n 
C12 H12A POV sing 343 n n 
C212 C213 POV sing 344 n n 
C212 H212 POV sing 345 n n 
C212 H21B POV sing 346 n n 
C312 C313 POV sing 347 n n 
C312 H312 POV sing 348 n n 
C312 H31C POV sing 349 n n 
C13 H13 POV sing 350 n n 
C13 H13A POV sing 351 n n 
C13 H13B POV sing 352 n n 
C213 C214 POV sing 353 n n 
C213 H213 POV sing 354 n n 
C213 H21C POV sing 355 n n 
C313 C314 POV sing 356 n n 
C313 H313 POV sing 357 n n 
C313 H31D POV sing 358 n n 
C14 H14 POV sing 359 n n 
C14 H14A POV sing 360 n n 
C14 H14B POV sing 361 n n 
C214 C215 POV sing 362 n n 
C214 H214 POV sing 363 n n 
C214 H21D POV sing 364 n n 
C314 C315 POV sing 365 n n 
C314 H314 POV sing 366 n n 
C314 H31E POV sing 367 n n 
C15 H15 POV sing 368 n n 
C15 H15A POV sing 369 n n 
C15 H15B POV sing 370 n n 
C215 C216 POV sing 371 n n 
C215 H215 POV sing 372 n n 
C215 H21E POV sing 373 n n 
C315 C316 POV sing 374 n n 
C315 H315 POV sing 375 n n 
C315 H31F POV sing 376 n n 
C216 C217 POV sing 377 n n 
C216 H216 POV sing 378 n n 
C216 H21F POV sing 379 n n 
C316 H316 POV sing 380 n n 
C316 H31G POV sing 381 n n 
C316 H31H POV sing 382 n n 
C217 C218 POV sing 383 n n 
C217 H217 POV sing 384 n n 
C217 H21G POV sing 385 n n 
C218 H218 POV sing 386 n n 
C218 H21H POV sing 387 n n 
C218 H21J POV sing 388 n n 
C21 O21 POV sing 389 n n 
C21 C22 POV sing 390 n n 
C21 O22 POV doub 391 n n 
C22 C23 POV sing 392 n n 
C22 H22 POV sing 393 n n 
C22 H22A POV sing 394 n n 
C23 C24 POV sing 395 n n 
C23 H23 POV sing 396 n n 
C23 H23A POV sing 397 n n 
C24 C25 POV sing 398 n n 
C24 H24 POV sing 399 n n 
C24 H24A POV sing 400 n n 
C25 C26 POV sing 401 n n 
C25 H25 POV sing 402 n n 
C25 H25A POV sing 403 n n 
C26 C27 POV sing 404 n n 
C26 H26 POV sing 405 n n 
C26 H26A POV sing 406 n n 
C27 C28 POV sing 407 n n 
C27 H27 POV sing 408 n n 
C27 H27A POV sing 409 n n 
C28 C29 POV sing 410 n n 
C28 H28 POV sing 411 n n 
C28 H28A POV sing 412 n n 
C29 H29 POV sing 413 n n 
C31 O31 POV sing 414 n n 
C31 C32 POV sing 415 n n 
C31 O32 POV doub 416 n n 
C32 C33 POV sing 417 n n 
C32 H32 POV sing 418 n n 
C32 H32A POV sing 419 n n 
C33 C34 POV sing 420 n n 
C33 H33 POV sing 421 n n 
C33 H33A POV sing 422 n n 
C34 C35 POV sing 423 n n 
C34 H34 POV sing 424 n n 
C34 H34A POV sing 425 n n 
C35 C36 POV sing 426 n n 
C35 H35 POV sing 427 n n 
C35 H35A POV sing 428 n n 
C36 C37 POV sing 429 n n 
C36 H36 POV sing 430 n n 
C36 H36A POV sing 431 n n 
C37 C38 POV sing 432 n n 
C37 H37 POV sing 433 n n 
C37 H37A POV sing 434 n n 
C38 C39 POV sing 435 n n 
C38 H38 POV sing 436 n n 
C38 H38A POV sing 437 n n 
C39 H39 POV sing 438 n n 
C39 H39A POV sing 439 n n 
#
_atom_sites.entry_id                     8FPF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 POV D 1 701 1 POV POV . 
D 3 POV D 1 702 2 POV POV . 
E 3 POV D 1 703 5 POV POV . 
F 3 POV D 1 704 6 POV POV . 
G 3 POV D 1 705 7 POV POV . 
H 3 POV D 1 706 8 POV POV . 
I 3 POV D 1 707 9 POV POV . 
J 3 POV D 1 708 10 POV POV . 
K 3 POV D 1 709 13 POV POV . 
L 3 POV D 1 710 14 POV POV . 
M 3 POV D 1 711 15 POV POV . 
N 3 POV D 1 712 16 POV POV . 
O 3 POV D 1 713 17 POV POV . 
P 3 POV D 1 714 22 POV POV . 
Q 4 ATP D 1 715 1 ATP ATP . 
R 3 POV C 1 601 3 POV POV . 
S 3 POV C 1 602 4 POV POV . 
T 3 POV C 1 603 11 POV POV . 
U 3 POV C 1 604 12 POV POV . 
V 3 POV C 1 605 18 POV POV . 
W 3 POV C 1 606 19 POV POV . 
X 3 POV C 1 607 20 POV POV . 
Y 3 POV C 1 608 21 POV POV . 
Z 3 POV C 1 609 23 POV POV . 
AA 3 POV C 1 610 24 POV POV . 
BA 3 POV C 1 611 25 POV POV . 
CA 4 ATP C 1 612 2 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . J 3 139.797 177.289 159.672 1 57 ? N POV 708 D 1 
HETATM 2 P P POV . . . J 3 142.45 175.929 163.579 1 57 ? P POV 708 D 1 
HETATM 3 C C1 POV . . . J 3 143.734 173.949 164.783 1 57 ? C1 POV 708 D 1 
HETATM 4 C C2 POV . . . J 3 143.221 173.376 166.086 1 57 ? C2 POV 708 D 1 
HETATM 5 C C3 POV . . . J 3 144.33 172.979 167.032 1 57 ? C3 POV 708 D 1 
HETATM 6 C C11 POV . . . J 3 140.616 175.911 161.679 1 57 ? C11 POV 708 D 1 
HETATM 7 O O11 POV . . . J 3 142.626 174.376 163.943 1 57 ? O11 POV 708 D 1 
HETATM 8 C C12 POV . . . J 3 140.347 177.269 161.083 1 57 ? C12 POV 708 D 1 
HETATM 9 O O12 POV . . . J 3 140.933 176.066 163.077 1 57 ? O12 POV 708 D 1 
HETATM 10 C C13 POV . . . J 3 139.617 178.685 159.214 1 57 ? C13 POV 708 D 1 
HETATM 11 O O13 POV . . . J 3 142.536 176.708 164.86 1 57 ? O13 POV 708 D 1 
HETATM 12 C C14 POV . . . J 3 140.714 176.585 158.737 1 57 ? C14 POV 708 D 1 
HETATM 13 O O14 POV . . . J 3 143.405 176.226 162.461 1 57 ? O14 POV 708 D 1 
HETATM 14 C C15 POV . . . J 3 138.476 176.61 159.636 1 57 ? C15 POV 708 D 1 
HETATM 15 C C21 POV . . . J 3 141.201 172.099 166.351 1 57 ? C21 POV 708 D 1 
HETATM 16 O O21 POV . . . J 3 142.415 172.212 165.79 1 57 ? O21 POV 708 D 1 
HETATM 17 C C22 POV . . . J 3 140.075 172.554 165.476 1 57 ? C22 POV 708 D 1 
HETATM 18 O O22 POV . . . J 3 141.037 171.642 167.446 1 57 ? O22 POV 708 D 1 
HETATM 19 C C23 POV . . . J 3 138.726 172.314 166.073 1 57 ? C23 POV 708 D 1 
HETATM 20 C C24 POV . . . J 3 137.604 172.54 165.08 1 57 ? C24 POV 708 D 1 
HETATM 21 C C25 POV . . . J 3 137.35 173.983 164.756 1 57 ? C25 POV 708 D 1 
HETATM 22 C C26 POV . . . J 3 136.905 174.225 163.345 1 57 ? C26 POV 708 D 1 
HETATM 23 C C27 POV . . . J 3 135.512 173.706 163.026 1 57 ? C27 POV 708 D 1 
HETATM 24 C C28 POV . . . J 3 135.225 173.621 161.566 1 57 ? C28 POV 708 D 1 
HETATM 25 C C29 POV . . . J 3 135.613 174.857 160.817 1 57 ? C29 POV 708 D 1 
HETATM 26 C C31 POV . . . J 3 143.543 172.135 169.079 1 57 ? C31 POV 708 D 1 
HETATM 27 O O31 POV . . . J 3 143.909 171.859 167.837 1 57 ? O31 POV 708 D 1 
HETATM 28 C C32 POV . . . J 3 144.323 171.345 170.074 1 57 ? C32 POV 708 D 1 
HETATM 29 O O32 POV . . . J 3 142.678 172.91 169.347 1 57 ? O32 POV 708 D 1 
HETATM 30 C C33 POV . . . J 3 143.952 171.628 171.492 1 57 ? C33 POV 708 D 1 
HETATM 31 C C34 POV . . . J 3 144.511 172.948 171.993 1 57 ? C34 POV 708 D 1 
HETATM 32 C C35 POV . . . J 3 144.016 173.363 173.355 1 57 ? C35 POV 708 D 1 
HETATM 33 C C36 POV . . . J 3 144.508 172.505 174.488 1 57 ? C36 POV 708 D 1 
HETATM 34 H H1 POV . . . J 3 144.391 174.793 164.984 1 57 ? H1 POV 708 D 1 
HETATM 35 H H1A POV . . . J 3 144.328 173.201 164.259 1 57 ? H1A POV 708 D 1 
HETATM 36 H H2 POV . . . J 3 142.64 174.152 166.581 1 57 ? H2 POV 708 D 1 
HETATM 37 H H3 POV . . . J 3 145.224 172.717 166.468 1 57 ? H3 POV 708 D 1 
HETATM 38 H H3A POV . . . J 3 144.592 173.82 167.672 1 57 ? H3A POV 708 D 1 
HETATM 39 H H11 POV . . . J 3 139.745 175.269 161.56 1 57 ? H11 POV 708 D 1 
HETATM 40 H H11A POV . . . J 3 141.441 175.428 161.158 1 57 ? H11A POV 708 D 1 
HETATM 41 H H12 POV . . . J 3 141.276 177.837 161.095 1 57 ? H12 POV 708 D 1 
HETATM 42 H H12A POV . . . J 3 139.645 177.793 161.73 1 57 ? H12A POV 708 D 1 
HETATM 43 H H22 POV . . . J 3 140.19 173.618 165.273 1 57 ? H22 POV 708 D 1 
HETATM 44 H H22A POV . . . J 3 140.137 172.038 164.519 1 57 ? H22A POV 708 D 1 
HETATM 45 H H32 POV . . . J 3 144.178 170.284 169.875 1 57 ? H32 POV 708 D 1 
HETATM 46 H H32A POV . . . J 3 145.383 171.552 169.938 1 57 ? H32A POV 708 D 1 
HETATM 47 H H13 POV . . . J 3 139.222 178.677 158.199 1 57 ? H13 POV 708 D 1 
HETATM 48 H H13A POV . . . J 3 138.919 179.19 159.881 1 57 ? H13A POV 708 D 1 
HETATM 49 H H13B POV . . . J 3 140.581 179.191 159.233 1 57 ? H13B POV 708 D 1 
HETATM 50 H H23 POV . . . J 3 138.675 171.293 166.448 1 57 ? H23 POV 708 D 1 
HETATM 51 H H23A POV . . . J 3 138.588 172.974 166.928 1 57 ? H23A POV 708 D 1 
HETATM 52 H H33 POV . . . J 3 142.867 171.64 171.583 1 57 ? H33 POV 708 D 1 
HETATM 53 H H33A POV . . . J 3 144.316 170.821 172.126 1 57 ? H33A POV 708 D 1 
HETATM 54 H H14 POV . . . J 3 140.291 176.617 157.734 1 57 ? H14 POV 708 D 1 
HETATM 55 H H14A POV . . . J 3 141.682 177.083 158.748 1 57 ? H14A POV 708 D 1 
HETATM 56 H H14B POV . . . J 3 140.825 175.551 159.06 1 57 ? H14B POV 708 D 1 
HETATM 57 H H24 POV . . . J 3 137.837 172.008 164.159 1 57 ? H24 POV 708 D 1 
HETATM 58 H H24A POV . . . J 3 136.689 172.102 165.477 1 57 ? H24A POV 708 D 1 
HETATM 59 H H34 POV . . . J 3 145.597 172.88 172.021 1 57 ? H34 POV 708 D 1 
HETATM 60 H H34A POV . . . J 3 144.26 173.729 171.277 1 57 ? H34A POV 708 D 1 
HETATM 61 H H15 POV . . . J 3 138.094 176.632 158.617 1 57 ? H15 POV 708 D 1 
HETATM 62 H H15A POV . . . J 3 138.598 175.579 159.964 1 57 ? H15A POV 708 D 1 
HETATM 63 H H15B POV . . . J 3 137.79 177.133 160.301 1 57 ? H15B POV 708 D 1 
HETATM 64 H H25 POV . . . J 3 136.591 174.368 165.436 1 57 ? H25 POV 708 D 1 
HETATM 65 H H25A POV . . . J 3 138.261 174.551 164.94 1 57 ? H25A POV 708 D 1 
HETATM 66 H H35 POV . . . J 3 144.319 174.393 173.539 1 57 ? H35 POV 708 D 1 
HETATM 67 H H35A POV . . . J 3 142.927 173.347 173.351 1 57 ? H35A POV 708 D 1 
HETATM 68 H H26 POV . . . J 3 136.934 175.295 163.147 1 57 ? H26 POV 708 D 1 
HETATM 69 H H26A POV . . . J 3 137.617 173.756 162.668 1 57 ? H26A POV 708 D 1 
HETATM 70 H H27 POV . . . J 3 135.392 172.718 163.469 1 57 ? H27 POV 708 D 1 
HETATM 71 H H27A POV . . . J 3 134.775 174.357 163.495 1 57 ? H27A POV 708 D 1 
HETATM 72 H H28 POV . . . J 3 135.757 172.768 161.147 1 57 ? H28 POV 708 D 1 
HETATM 73 H H28A POV . . . J 3 134.162 173.435 161.422 1 57 ? H28A POV 708 D 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           73 
#