data_8FPV
#
_model_server_result.job_id            clzDUIDcJOQ456r29GkEsw 
_model_server_result.datetime_utc      '2024-11-25 17:03:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fpv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1301}' 
#
_entry.id    8FPV 
#
_exptl.entry_id    8FPV 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              147.129 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GLUTAMIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FPV 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FPV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 739 A CYS 718 1_555 A SG CYS 794 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 739 B CYS 718 1_555 B SG CYS 794 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 C SG CYS 739 C CYS 718 1_555 C SG CYS 794 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 D SG CYS 739 D CYS 718 1_555 D SG CYS 794 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C5 H9 N O4' 
_chem_comp.formula_weight    147.129 
_chem_comp.id                GLU 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'GLUTAMIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA GLU sing 145 n n 
N H GLU sing 146 n n 
N H2 GLU sing 147 n n 
CA C GLU sing 148 n n 
CA CB GLU sing 149 n n 
CA HA GLU sing 150 n n 
C O GLU doub 151 n n 
C OXT GLU sing 152 n n 
CB CG GLU sing 153 n n 
CB HB2 GLU sing 154 n n 
CB HB3 GLU sing 155 n n 
CG CD GLU sing 156 n n 
CG HG2 GLU sing 157 n n 
CG HG3 GLU sing 158 n n 
CD OE1 GLU doub 159 n n 
CD OE2 GLU sing 160 n n 
OE2 HE2 GLU sing 161 n n 
OXT HXT GLU sing 162 n n 
#
_atom_sites.entry_id                     8FPV 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GLU A 1 1301 1301 GLU GLU . 
F 3 CYZ A 1 1302 1302 CYZ CYZ . 
G 2 GLU B 1 1301 1301 GLU GLU . 
H 3 CYZ B 1 1302 1302 CYZ CYZ . 
I 2 GLU C 1 1301 1301 GLU GLU . 
J 3 CYZ C 1 1302 1302 CYZ CYZ . 
K 2 GLU D 1 1301 1301 GLU GLU . 
L 3 CYZ D 1 1302 1302 CYZ CYZ . 
M 4 HOH A 1 1401 1309 HOH HOH . 
M 4 HOH A 2 1402 1310 HOH HOH . 
M 4 HOH A 3 1403 1306 HOH HOH . 
N 4 HOH B 1 1401 1309 HOH HOH . 
N 4 HOH B 2 1402 1308 HOH HOH . 
N 4 HOH B 3 1403 1310 HOH HOH . 
O 4 HOH C 1 1401 1309 HOH HOH . 
O 4 HOH C 2 1402 1306 HOH HOH . 
O 4 HOH C 3 1403 1310 HOH HOH . 
P 4 HOH D 1 1401 1309 HOH HOH . 
P 4 HOH D 2 1402 1308 HOH HOH . 
P 4 HOH D 3 1403 1310 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GLU . . . K 2 177.978 156.924 173.915 1 22.84 ? N GLU 1301 D 1 
HETATM 2 C CA GLU . . . K 2 179.4 157.113 173.66 1 25.98 ? CA GLU 1301 D 1 
HETATM 3 C C GLU . . . K 2 180.213 156.884 174.926 1 36.17 ? C GLU 1301 D 1 
HETATM 4 O O GLU . . . K 2 181.421 157.11 174.953 1 42.5 ? O GLU 1301 D 1 
HETATM 5 C CB GLU . . . K 2 179.665 158.513 173.109 1 31.58 ? CB GLU 1301 D 1 
HETATM 6 C CG GLU . . . K 2 179.024 158.774 171.76 1 31.68 ? CG GLU 1301 D 1 
HETATM 7 C CD GLU . . . K 2 179.956 158.472 170.606 1 39.04 ? CD GLU 1301 D 1 
HETATM 8 O OE1 GLU . . . K 2 179.49 158.48 169.449 1 42.63 ? OE1 GLU 1301 D 1 
HETATM 9 O OE2 GLU . . . K 2 181.153 158.225 170.857 1 36.46 ? OE2 GLU 1301 D 1 
HETATM 10 O OXT GLU . . . K 2 179.678 156.473 175.952 1 39.74 ? OXT GLU 1301 D 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#