data_8FQ9 # _model_server_result.job_id ukOhrRbblZ_2Kf0sy0FeUg _model_server_result.datetime_utc '2024-11-08 15:35:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fq9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 8FQ9 # _exptl.entry_id 8FQ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8FQ9 _cell.length_a 127.225 _cell.length_b 127.225 _cell.length_c 104.042 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FQ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 8FQ9 _atom_sites.fract_transf_matrix[1][1] 0.00786 _atom_sites.fract_transf_matrix[1][2] 0.004538 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009612 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE A 1 500 500 1PE 1PE . C 3 LMO A 1 501 501 LMO LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . B 2 -49.701 8.26 -8.035 1 103.12 ? OH2 1PE 500 A 1 HETATM 2 C C12 1PE . . . B 2 -50.471 8.931 -8.997 1 109.3 ? C12 1PE 500 A 1 HETATM 3 C C22 1PE . . . B 2 -51.109 7.912 -9.941 1 104.94 ? C22 1PE 500 A 1 HETATM 4 O OH3 1PE . . . B 2 -51.858 8.565 -10.929 1 107.92 ? OH3 1PE 500 A 1 HETATM 5 C C13 1PE . . . B 2 -53.807 9.757 -11.645 1 112.54 ? C13 1PE 500 A 1 HETATM 6 C C23 1PE . . . B 2 -53.133 8.973 -10.517 1 108.52 ? C23 1PE 500 A 1 HETATM 7 O OH4 1PE . . . B 2 -54.681 10.701 -11.093 1 109.1 ? OH4 1PE 500 A 1 HETATM 8 C C14 1PE . . . B 2 -56.013 12.672 -11.236 1 116.76 ? C14 1PE 500 A 1 HETATM 9 C C24 1PE . . . B 2 -55.104 11.696 -11.981 1 116.41 ? C24 1PE 500 A 1 HETATM 10 O OH5 1PE . . . B 2 -56.015 13.913 -11.884 1 118.49 ? OH5 1PE 500 A 1 HETATM 11 C C15 1PE . . . B 2 -56.758 16.19 -12.003 1 126.06 ? C15 1PE 500 A 1 HETATM 12 C C25 1PE . . . B 2 -56.943 14.819 -11.357 1 112.4 ? C25 1PE 500 A 1 HETATM 13 O OH6 1PE . . . B 2 -55.546 16.743 -11.576 1 128.64 ? OH6 1PE 500 A 1 HETATM 14 C C16 1PE . . . B 2 -54.332 18.084 -10.017 1 128.89 ? C16 1PE 500 A 1 HETATM 15 C C26 1PE . . . B 2 -55.675 17.828 -10.7 1 134.88 ? C26 1PE 500 A 1 HETATM 16 O OH7 1PE . . . B 2 -54.265 19.413 -9.58 1 124.77 ? OH7 1PE 500 A 1 HETATM 17 H HO2 1PE . . . B 2 -49.745 8.676 -7.296 1 125.64 ? HO2 1PE 500 A 1 HETATM 18 H H121 1PE . . . B 2 -49.902 9.53 -9.506 1 133.05 ? H121 1PE 500 A 1 HETATM 19 H H122 1PE . . . B 2 -51.166 9.443 -8.555 1 133.05 ? H122 1PE 500 A 1 HETATM 20 H H221 1PE . . . B 2 -51.692 7.326 -9.433 1 127.81 ? H221 1PE 500 A 1 HETATM 21 H H222 1PE . . . B 2 -50.412 7.386 -10.363 1 127.81 ? H222 1PE 500 A 1 HETATM 22 H H131 1PE . . . B 2 -54.306 9.146 -12.211 1 136.93 ? H131 1PE 500 A 1 HETATM 23 H H132 1PE . . . B 2 -53.132 10.21 -12.174 1 136.93 ? H132 1PE 500 A 1 HETATM 24 H H231 1PE . . . B 2 -53.054 9.539 -9.733 1 132.11 ? H231 1PE 500 A 1 HETATM 25 H H232 1PE . . . B 2 -53.668 8.193 -10.301 1 132.11 ? H232 1PE 500 A 1 HETATM 26 H H141 1PE . . . B 2 -56.916 12.319 -11.217 1 142 ? H141 1PE 500 A 1 HETATM 27 H H142 1PE . . . B 2 -55.69 12.784 -10.329 1 142 ? H142 1PE 500 A 1 HETATM 28 H H241 1PE . . . B 2 -55.592 11.292 -12.715 1 141.58 ? H241 1PE 500 A 1 HETATM 29 H H242 1PE . . . B 2 -54.332 12.171 -12.329 1 141.58 ? H242 1PE 500 A 1 HETATM 30 H H151 1PE . . . B 2 -57.489 16.772 -11.743 1 153.16 ? H151 1PE 500 A 1 HETATM 31 H H152 1PE . . . B 2 -56.748 16.095 -12.968 1 153.16 ? H152 1PE 500 A 1 HETATM 32 H H251 1PE . . . B 2 -56.809 14.895 -10.399 1 136.76 ? H251 1PE 500 A 1 HETATM 33 H H252 1PE . . . B 2 -57.841 14.499 -11.534 1 136.76 ? H252 1PE 500 A 1 HETATM 34 H H161 1PE . . . B 2 -53.614 17.916 -10.647 1 156.55 ? H161 1PE 500 A 1 HETATM 35 H H162 1PE . . . B 2 -54.24 17.49 -9.255 1 156.55 ? H162 1PE 500 A 1 HETATM 36 H H261 1PE . . . B 2 -56.347 17.625 -10.03 1 163.75 ? H261 1PE 500 A 1 HETATM 37 H H262 1PE . . . B 2 -55.942 18.616 -11.198 1 163.75 ? H262 1PE 500 A 1 HETATM 38 H HO7 1PE . . . B 2 -54.884 19.557 -9.016 1 151.61 ? HO7 1PE 500 A 1 # _model_server_stats.io_time_ms 97 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #