data_8FQ9
#
_model_server_result.job_id            rSuGYUdFc4WXqMxndjdSvg 
_model_server_result.datetime_utc      '2024-11-08 15:35:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fq9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    8FQ9 
#
_exptl.entry_id    8FQ9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'dodecyl 6-O-alpha-D-galactopyranosyl-beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8FQ9 
_cell.length_a            127.225 
_cell.length_b            127.225 
_cell.length_c            104.042 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FQ9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'dodecyl 6-O-alpha-D-galactopyranosyl-beta-D-glucopyranoside' 
_chem_comp.type              saccharide 
_chem_comp.pdbx_synonyms     'DDMB;dodecyl melibioside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C28 C27 LMO sing 229 n n 
C28 C29 LMO sing 230 n n 
C32 C31 LMO sing 231 n n 
C32 C33 LMO sing 232 n n 
C26 C27 LMO sing 233 n n 
C26 C25 LMO sing 234 n n 
C31 C30 LMO sing 235 n n 
C29 C30 LMO sing 236 n n 
C24 C25 LMO sing 237 n n 
C24 C23 LMO sing 238 n n 
C33 C34 LMO sing 239 n n 
C23 O22 LMO sing 240 n n 
O21 C19 LMO sing 241 n n 
O22 C18 LMO sing 242 n n 
C18 C19 LMO sing 243 n n 
C18 O15 LMO sing 244 n n 
C19 C17 LMO sing 245 n n 
C17 O35 LMO sing 246 n n 
C17 C16 LMO sing 247 n n 
O15 C14 LMO sing 248 n n 
C16 C14 LMO sing 249 n n 
C16 O20 LMO sing 250 n n 
C14 C13 LMO sing 251 n n 
O10 C03 LMO sing 252 n n 
C04 C03 LMO sing 253 n n 
C04 O05 LMO sing 254 n n 
C04 O08 LMO sing 255 n n 
C03 C02 LMO sing 256 n n 
C13 O08 LMO sing 257 n n 
O05 C06 LMO sing 258 n n 
O07 C01 LMO sing 259 n n 
C02 O09 LMO sing 260 n n 
C02 C01 LMO sing 261 n n 
C06 C11 LMO sing 262 n n 
C06 C01 LMO sing 263 n n 
C11 O12 LMO sing 264 n n 
C13 H131 LMO sing 265 n n 
C13 H132 LMO sing 266 n n 
C17 H171 LMO sing 267 n n 
C24 H241 LMO sing 268 n n 
C24 H242 LMO sing 269 n n 
C26 H262 LMO sing 270 n n 
C26 H261 LMO sing 271 n n 
C28 H281 LMO sing 272 n n 
C28 H282 LMO sing 273 n n 
C01 H011 LMO sing 274 n n 
C02 H021 LMO sing 275 n n 
C03 H031 LMO sing 276 n n 
C04 H041 LMO sing 277 n n 
C06 H061 LMO sing 278 n n 
C11 H111 LMO sing 279 n n 
C11 H112 LMO sing 280 n n 
C14 H141 LMO sing 281 n n 
C16 H161 LMO sing 282 n n 
C18 H181 LMO sing 283 n n 
C19 H191 LMO sing 284 n n 
C23 H232 LMO sing 285 n n 
C23 H231 LMO sing 286 n n 
C25 H252 LMO sing 287 n n 
C25 H251 LMO sing 288 n n 
C27 H271 LMO sing 289 n n 
C27 H272 LMO sing 290 n n 
C29 H291 LMO sing 291 n n 
C29 H292 LMO sing 292 n n 
C30 H302 LMO sing 293 n n 
C30 H301 LMO sing 294 n n 
C31 H312 LMO sing 295 n n 
C31 H311 LMO sing 296 n n 
C32 H322 LMO sing 297 n n 
C32 H321 LMO sing 298 n n 
C33 H331 LMO sing 299 n n 
C33 H332 LMO sing 300 n n 
C34 H343 LMO sing 301 n n 
C34 H342 LMO sing 302 n n 
C34 H341 LMO sing 303 n n 
O07 H071 LMO sing 304 n n 
O09 H091 LMO sing 305 n n 
O10 H101 LMO sing 306 n n 
O12 H121 LMO sing 307 n n 
O20 H201 LMO sing 308 n n 
O21 H211 LMO sing 309 n n 
O35 H351 LMO sing 310 n n 
#
_atom_sites.entry_id                     8FQ9 
_atom_sites.fract_transf_matrix[1][1]    0.00786 
_atom_sites.fract_transf_matrix[1][2]    0.004538 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009076 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009612 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1PE A 1 500 500 1PE 1PE . 
C 3 LMO A 1 501 501 LMO LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 LMO . . . C 3 -55.177 0.197 11.986 1 121.03 ? C13 LMO 501 A 1 
HETATM 2 C C17 LMO . . . C 3 -55.044 -0.114 8.173 1 125.01 ? C17 LMO 501 A 1 
HETATM 3 C C24 LMO . . . C 3 -54.557 -4.727 10.684 1 129.07 ? C24 LMO 501 A 1 
HETATM 4 C C14 LMO . . . C 3 -54.688 -0.476 10.699 1 129.62 ? C14 LMO 501 A 1 
HETATM 5 C C16 LMO . . . C 3 -54.858 0.526 9.549 1 119.55 ? C16 LMO 501 A 1 
HETATM 6 C C18 LMO . . . C 3 -55.342 -2.294 9.282 1 131.79 ? C18 LMO 501 A 1 
HETATM 7 C C19 LMO . . . C 3 -55.936 -1.348 8.247 1 136.04 ? C19 LMO 501 A 1 
HETATM 8 C C23 LMO . . . C 3 -55.279 -4.651 9.338 1 137.66 ? C23 LMO 501 A 1 
HETATM 9 O O08 LMO . . . C 3 -54.363 1.292 12.296 1 115.26 ? O08 LMO 501 A 1 
HETATM 10 O O15 LMO . . . C 3 -55.423 -1.651 10.517 1 128.18 ? O15 LMO 501 A 1 
HETATM 11 O O20 LMO . . . C 3 -53.696 1.314 9.496 1 115.78 ? O20 LMO 501 A 1 
HETATM 12 O O21 LMO . . . C 3 -55.993 -1.983 7 1 128.76 ? O21 LMO 501 A 1 
HETATM 13 O O22 LMO . . . C 3 -56.065 -3.492 9.288 1 138.91 ? O22 LMO 501 A 1 
HETATM 14 O O35 LMO . . . C 3 -55.642 0.824 7.316 1 122.56 ? O35 LMO 501 A 1 
HETATM 15 C C04 LMO . . . C 3 -55.021 2.528 12.311 1 113.93 ? C04 LMO 501 A 1 
HETATM 16 C C03 LMO . . . C 3 -54.014 3.643 12.61 1 110.05 ? C03 LMO 501 A 1 
HETATM 17 C C02 LMO . . . C 3 -53.63 3.64 14.089 1 108.44 ? C02 LMO 501 A 1 
HETATM 18 C C01 LMO . . . C 3 -54.87 3.799 14.963 1 107.33 ? C01 LMO 501 A 1 
HETATM 19 C C06 LMO . . . C 3 -55.852 2.665 14.674 1 116.45 ? C06 LMO 501 A 1 
HETATM 20 C C11 LMO . . . C 3 -57.197 2.97 15.337 1 112.73 ? C11 LMO 501 A 1 
HETATM 21 O O10 LMO . . . C 3 -52.858 3.444 11.845 1 108.18 ? O10 LMO 501 A 1 
HETATM 22 O O09 LMO . . . C 3 -52.757 4.71 14.337 1 104.6 ? O09 LMO 501 A 1 
HETATM 23 O O07 LMO . . . C 3 -55.476 5.034 14.691 1 105.76 ? O07 LMO 501 A 1 
HETATM 24 O O05 LMO . . . C 3 -56.021 2.531 13.289 1 111.44 ? O05 LMO 501 A 1 
HETATM 25 O O12 LMO . . . C 3 -57.827 4.025 14.664 1 110.32 ? O12 LMO 501 A 1 
HETATM 26 H H131 LMO . . . C 3 -56.06 0.492 11.867 1 147.12 ? H131 LMO 501 A 1 
HETATM 27 H H132 LMO . . . C 3 -55.146 -0.422 12.691 1 147.12 ? H132 LMO 501 A 1 
HETATM 28 H H171 LMO . . . C 3 -54.202 -0.378 7.852 1 151.9 ? H171 LMO 501 A 1 
HETATM 29 H H241 LMO . . . C 3 -55.119 -4.394 11.358 1 156.77 ? H241 LMO 501 A 1 
HETATM 30 H H242 LMO . . . C 3 -54.341 -5.621 10.872 1 156.77 ? H242 LMO 501 A 1 
HETATM 31 H H141 LMO . . . C 3 -53.781 -0.714 10.736 1 157.43 ? H141 LMO 501 A 1 
HETATM 32 H H161 LMO . . . C 3 -55.639 1.015 9.729 1 145.34 ? H161 LMO 501 A 1 
HETATM 33 H H181 LMO . . . C 3 -54.448 -2.503 9.087 1 160.03 ? H181 LMO 501 A 1 
HETATM 34 H H191 LMO . . . C 3 -56.809 -1.101 8.489 1 165.13 ? H191 LMO 501 A 1 
HETATM 35 H H232 LMO . . . C 3 -55.828 -5.406 9.236 1 167.08 ? H232 LMO 501 A 1 
HETATM 36 H H231 LMO . . . C 3 -54.646 -4.628 8.645 1 167.08 ? H231 LMO 501 A 1 
HETATM 37 H H201 LMO . . . C 3 -53.9 2.118 9.522 1 140.83 ? H201 LMO 501 A 1 
HETATM 38 H H211 LMO . . . C 3 -56.507 -2.636 7.044 1 156.4 ? H211 LMO 501 A 1 
HETATM 39 H H351 LMO . . . C 3 -56.172 0.435 6.806 1 148.96 ? H351 LMO 501 A 1 
HETATM 40 H H041 LMO . . . C 3 -55.412 2.672 11.47 1 138.6 ? H041 LMO 501 A 1 
HETATM 41 H H031 LMO . . . C 3 -54.411 4.467 12.395 1 133.94 ? H031 LMO 501 A 1 
HETATM 42 H H021 LMO . . . C 3 -53.215 2.824 14.294 1 132.02 ? H021 LMO 501 A 1 
HETATM 43 H H011 LMO . . . C 3 -54.622 3.767 15.868 1 130.68 ? H011 LMO 501 A 1 
HETATM 44 H H061 LMO . . . C 3 -55.512 1.862 15.021 1 141.63 ? H061 LMO 501 A 1 
HETATM 45 H H111 LMO . . . C 3 -57.056 3.212 16.233 1 137.16 ? H111 LMO 501 A 1 
HETATM 46 H H112 LMO . . . C 3 -57.743 2.206 15.301 1 137.16 ? H112 LMO 501 A 1 
HETATM 47 H H101 LMO . . . C 3 -53.072 3.245 11.066 1 131.7 ? H101 LMO 501 A 1 
HETATM 48 H H091 LMO . . . C 3 -52.164 4.724 13.754 1 127.41 ? H091 LMO 501 A 1 
HETATM 49 H H071 LMO . . . C 3 -54.907 5.562 14.391 1 128.8 ? H071 LMO 501 A 1 
HETATM 50 H H121 LMO . . . C 3 -58.632 3.843 14.556 1 134.27 ? H121 LMO 501 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           216 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           50 
#