data_8FTJ # _model_server_result.job_id WOyDd6_DSexl0LzVB2DFZA _model_server_result.datetime_utc '2024-11-29 06:58:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ftj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 8FTJ # _exptl.entry_id 8FTJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FTJ _cell.length_a 83.662 _cell.length_b 83.662 _cell.length_c 130.442 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall 'P 4w 2c' _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N GLY 1 A GLY 2 1_555 B C1' YB9 7 D YB9 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 sing covale ? covale2 B O3' DA 6 D DA 296 1_555 B P YB9 7 D YB9 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.59 ? covale ? covale3 B O3' YB9 7 D YB9 297 1_555 B P DG 8 D DG 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? hydrog WATSON-CRICK hydrog1 B N3 DC 1 D DC 291 1_555 C N1 DG 12 F DG 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N4 DC 1 D DC 291 1_555 C O6 DG 12 F DG 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O2 DC 1 D DC 291 1_555 C N2 DG 12 F DG 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N1 DG 2 D DG 292 1_555 C N3 DC 11 F DC 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N2 DG 2 D DG 292 1_555 C O2 DC 11 F DC 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O6 DG 2 D DG 292 1_555 C N4 DC 11 F DC 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N3 DT 3 D DT 293 1_555 C N1 DA 10 F DA 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O4 DT 3 D DT 293 1_555 C N6 DA 10 F DA 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N3 DC 4 D DC 294 1_555 C N1 DG 9 F DG 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N4 DC 4 D DC 294 1_555 C O6 DG 9 F DG 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B O2 DC 4 D DC 294 1_555 C N2 DG 9 F DG 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N3 DC 5 D DC 295 1_555 C N1 DG 8 F DG 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N4 DC 5 D DC 295 1_555 C O6 DG 8 F DG 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B O2 DC 5 D DC 295 1_555 C N2 DG 8 F DG 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N1 DA 6 D DA 296 1_555 C N3 DT 7 F DT 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N6 DA 6 D DA 296 1_555 C O4 DT 7 F DT 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N1 DG 8 D DG 298 1_555 C N3 DC 5 F DC 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N2 DG 8 D DG 298 1_555 C O2 DC 5 F DC 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B O6 DG 8 D DG 298 1_555 C N4 DC 5 F DC 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N3 DT 9 D DT 299 1_555 C N1 DA 4 F DA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O4 DT 9 D DT 299 1_555 C N6 DA 4 F DA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N3 DC 10 D DC 300 1_555 C N1 DG 3 F DG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N4 DC 10 D DC 300 1_555 C O6 DG 3 F DG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B O2 DC 10 D DC 300 1_555 C N2 DG 3 F DG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N3 DT 11 D DT 301 1_555 C N1 DA 2 F DA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B O4 DT 11 D DT 301 1_555 C N6 DA 2 F DA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B N1 DA 12 D DA 302 1_555 C N3 DT 1 F DT 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B N6 DA 12 D DA 302 1_555 C O4 DT 1 F DT 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 232 n n C1 C2 EDO sing 233 n n C1 H11 EDO sing 234 n n C1 H12 EDO sing 235 n n O1 HO1 EDO sing 236 n n C2 O2 EDO sing 237 n n C2 H21 EDO sing 238 n n C2 H22 EDO sing 239 n n O2 HO2 EDO sing 240 n n # _atom_sites.entry_id 8FTJ _atom_sites.fract_transf_matrix[1][1] 0.011953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011953 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO A 1 301 301 EDO EDO . E 4 EDO A 1 302 302 EDO EDO . F 4 EDO A 1 303 303 EDO EDO . G 5 SO4 A 1 304 1 SO4 SO4 . H 5 SO4 A 1 305 2 SO4 SO4 . I 5 SO4 A 1 306 3 SO4 SO4 . J 6 HOH A 1 401 104 HOH HOH . J 6 HOH A 2 402 125 HOH HOH . J 6 HOH A 3 403 111 HOH HOH . J 6 HOH A 4 404 62 HOH HOH . J 6 HOH A 5 405 40 HOH HOH . J 6 HOH A 6 406 94 HOH HOH . J 6 HOH A 7 407 47 HOH HOH . J 6 HOH A 8 408 69 HOH HOH . J 6 HOH A 9 409 87 HOH HOH . J 6 HOH A 10 410 60 HOH HOH . J 6 HOH A 11 411 107 HOH HOH . J 6 HOH A 12 412 67 HOH HOH . J 6 HOH A 13 413 105 HOH HOH . J 6 HOH A 14 414 112 HOH HOH . J 6 HOH A 15 415 18 HOH HOH . J 6 HOH A 16 416 50 HOH HOH . J 6 HOH A 17 417 7 HOH HOH . J 6 HOH A 18 418 8 HOH HOH . J 6 HOH A 19 419 100 HOH HOH . J 6 HOH A 20 420 124 HOH HOH . J 6 HOH A 21 421 2 HOH HOH . J 6 HOH A 22 422 41 HOH HOH . J 6 HOH A 23 423 119 HOH HOH . J 6 HOH A 24 424 13 HOH HOH . J 6 HOH A 25 425 80 HOH HOH . J 6 HOH A 26 426 1 HOH HOH . J 6 HOH A 27 427 11 HOH HOH . J 6 HOH A 28 428 3 HOH HOH . J 6 HOH A 29 429 83 HOH HOH . J 6 HOH A 30 430 95 HOH HOH . J 6 HOH A 31 431 96 HOH HOH . J 6 HOH A 32 432 10 HOH HOH . J 6 HOH A 33 433 106 HOH HOH . J 6 HOH A 34 434 84 HOH HOH . J 6 HOH A 35 435 78 HOH HOH . J 6 HOH A 36 436 22 HOH HOH . J 6 HOH A 37 437 52 HOH HOH . J 6 HOH A 38 438 5 HOH HOH . J 6 HOH A 39 439 110 HOH HOH . J 6 HOH A 40 440 63 HOH HOH . J 6 HOH A 41 441 64 HOH HOH . J 6 HOH A 42 442 44 HOH HOH . J 6 HOH A 43 443 101 HOH HOH . J 6 HOH A 44 444 28 HOH HOH . J 6 HOH A 45 445 36 HOH HOH . J 6 HOH A 46 446 9 HOH HOH . J 6 HOH A 47 447 74 HOH HOH . J 6 HOH A 48 448 39 HOH HOH . J 6 HOH A 49 449 102 HOH HOH . J 6 HOH A 50 450 88 HOH HOH . J 6 HOH A 51 451 25 HOH HOH . J 6 HOH A 52 452 19 HOH HOH . J 6 HOH A 53 453 46 HOH HOH . J 6 HOH A 54 454 56 HOH HOH . J 6 HOH A 55 455 29 HOH HOH . J 6 HOH A 56 456 70 HOH HOH . J 6 HOH A 57 457 68 HOH HOH . J 6 HOH A 58 458 20 HOH HOH . J 6 HOH A 59 459 59 HOH HOH . J 6 HOH A 60 460 90 HOH HOH . J 6 HOH A 61 461 14 HOH HOH . J 6 HOH A 62 462 76 HOH HOH . J 6 HOH A 63 463 16 HOH HOH . J 6 HOH A 64 464 15 HOH HOH . J 6 HOH A 65 465 33 HOH HOH . J 6 HOH A 66 466 72 HOH HOH . J 6 HOH A 67 467 48 HOH HOH . J 6 HOH A 68 468 26 HOH HOH . J 6 HOH A 69 469 66 HOH HOH . J 6 HOH A 70 470 126 HOH HOH . J 6 HOH A 71 471 53 HOH HOH . J 6 HOH A 72 472 55 HOH HOH . J 6 HOH A 73 473 32 HOH HOH . J 6 HOH A 74 474 54 HOH HOH . J 6 HOH A 75 475 31 HOH HOH . J 6 HOH A 76 476 34 HOH HOH . J 6 HOH A 77 477 6 HOH HOH . J 6 HOH A 78 478 108 HOH HOH . J 6 HOH A 79 479 75 HOH HOH . J 6 HOH A 80 480 42 HOH HOH . J 6 HOH A 81 481 113 HOH HOH . J 6 HOH A 82 482 118 HOH HOH . J 6 HOH A 83 483 91 HOH HOH . J 6 HOH A 84 484 77 HOH HOH . J 6 HOH A 85 485 79 HOH HOH . J 6 HOH A 86 486 43 HOH HOH . J 6 HOH A 87 487 24 HOH HOH . J 6 HOH A 88 488 123 HOH HOH . J 6 HOH A 89 489 92 HOH HOH . J 6 HOH A 90 490 116 HOH HOH . J 6 HOH A 91 491 51 HOH HOH . J 6 HOH A 92 492 93 HOH HOH . J 6 HOH A 93 493 114 HOH HOH . J 6 HOH A 94 494 71 HOH HOH . J 6 HOH A 95 495 38 HOH HOH . J 6 HOH A 96 496 81 HOH HOH . J 6 HOH A 97 497 97 HOH HOH . J 6 HOH A 98 498 99 HOH HOH . J 6 HOH A 99 499 4 HOH HOH . J 6 HOH A 100 500 103 HOH HOH . J 6 HOH A 101 501 127 HOH HOH . J 6 HOH A 102 502 17 HOH HOH . J 6 HOH A 103 503 109 HOH HOH . J 6 HOH A 104 504 98 HOH HOH . J 6 HOH A 105 505 12 HOH HOH . J 6 HOH A 106 506 37 HOH HOH . J 6 HOH A 107 507 65 HOH HOH . J 6 HOH A 108 508 61 HOH HOH . J 6 HOH A 109 509 86 HOH HOH . J 6 HOH A 110 510 58 HOH HOH . J 6 HOH A 111 511 89 HOH HOH . J 6 HOH A 112 512 117 HOH HOH . K 6 HOH D 1 401 30 HOH HOH . K 6 HOH D 2 402 45 HOH HOH . K 6 HOH D 3 403 82 HOH HOH . K 6 HOH D 4 404 27 HOH HOH . K 6 HOH D 5 405 49 HOH HOH . K 6 HOH D 6 406 35 HOH HOH . K 6 HOH D 7 407 122 HOH HOH . K 6 HOH D 8 408 57 HOH HOH . K 6 HOH D 9 409 23 HOH HOH . L 6 HOH F 1 401 21 HOH HOH . L 6 HOH F 2 402 85 HOH HOH . L 6 HOH F 3 403 120 HOH HOH . L 6 HOH F 4 404 115 HOH HOH . L 6 HOH F 5 405 73 HOH HOH . L 6 HOH F 6 406 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 4 -2.938 43.806 4.043 1 35.73 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . E 4 -2.969 42.709 4.964 1 36.78 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . E 4 -1.648 43.788 3.227 1 42.47 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . E 4 -0.52 44.1 4.056 1 39.81 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #