data_8FU3
#
_model_server_result.job_id            Ic4spIWJP6zeLsVbrMzkrg 
_model_server_result.datetime_utc      '2024-11-05 04:45:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fu3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2201}' 
#
_entry.id    8FU3 
#
_exptl.entry_id    8FU3 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              576.515 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-methoxy-3-methyl-N-{(2S)-3,3,3-trifluoro-2-[5-fluoro-6-(4-fluorophenyl)-4-(2-hydroxypropan-2-yl)pyridin-2-yl]-2-hydroxypropyl}cinnoline-6-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FU3 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FU3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H25 F5 N4 O4' 
_chem_comp.formula_weight    576.515 
_chem_comp.id                YBK 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-methoxy-3-methyl-N-{(2S)-3,3,3-trifluoro-2-[5-fluoro-6-(4-fluorophenyl)-4-(2-hydroxypropan-2-yl)pyridin-2-yl]-2-hydroxypropyl}cinnoline-6-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F31 C30 YBK sing 374 n n 
C29 C30 YBK doub 375 n y 
C29 C28 YBK sing 376 n y 
C30 C32 YBK sing 377 n y 
F24 C23 YBK sing 378 n n 
C28 C27 YBK doub 379 n y 
O37 C34 YBK sing 380 n n 
C32 C33 YBK doub 381 n y 
C27 C33 YBK sing 382 n y 
C27 C25 YBK sing 383 n n 
C23 C25 YBK doub 384 n y 
C23 C22 YBK sing 385 n y 
C36 C34 YBK sing 386 n n 
C34 C22 YBK sing 387 n n 
C34 C35 YBK sing 388 n n 
C25 N26 YBK sing 389 n y 
C22 C21 YBK doub 390 n y 
N26 C20 YBK doub 391 n y 
C21 C20 YBK sing 392 n y 
C20 C18 YBK sing 393 n n 
F41 C38 YBK sing 394 n n 
F40 C38 YBK sing 395 n n 
C18 C38 YBK sing 396 n n 
C18 C17 YBK sing 397 n n 
C18 O19 YBK sing 398 n n 
C38 F39 YBK sing 399 n n 
C17 N16 YBK sing 400 n n 
N16 C14 YBK sing 401 n n 
O15 C14 YBK doub 402 n n 
C14 C05 YBK sing 403 n n 
C05 C06 YBK doub 404 n y 
C05 C04 YBK sing 405 n y 
C06 C07 YBK sing 406 n y 
C04 C03 YBK doub 407 n y 
C07 C08 YBK doub 408 n y 
C07 C13 YBK sing 409 n y 
C03 C13 YBK sing 410 n y 
C03 O02 YBK sing 411 n n 
C08 C09 YBK sing 412 n y 
C01 O02 YBK sing 413 n n 
C13 N12 YBK doub 414 n y 
C09 C10 YBK sing 415 n n 
C09 N11 YBK doub 416 n y 
N12 N11 YBK sing 417 n y 
C10 H1 YBK sing 418 n n 
C10 H2 YBK sing 419 n n 
C10 H3 YBK sing 420 n n 
C17 H4 YBK sing 421 n n 
C17 H5 YBK sing 422 n n 
C21 H6 YBK sing 423 n n 
C28 H7 YBK sing 424 n n 
C01 H8 YBK sing 425 n n 
C01 H9 YBK sing 426 n n 
C01 H10 YBK sing 427 n n 
C04 H11 YBK sing 428 n n 
C06 H12 YBK sing 429 n n 
C08 H13 YBK sing 430 n n 
N16 H14 YBK sing 431 n n 
O19 H15 YBK sing 432 n n 
C29 H16 YBK sing 433 n n 
C32 H17 YBK sing 434 n n 
C33 H18 YBK sing 435 n n 
C35 H19 YBK sing 436 n n 
C35 H20 YBK sing 437 n n 
C35 H21 YBK sing 438 n n 
C36 H22 YBK sing 439 n n 
C36 H23 YBK sing 440 n n 
C36 H24 YBK sing 441 n n 
O37 H25 YBK sing 442 n n 
#
_atom_sites.entry_id                     8FU3 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           YBK 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      2201 
_pdbx_nonpoly_scheme.auth_seq_num     1501 
_pdbx_nonpoly_scheme.pdb_mon_id       YBK 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 YBK . . . F 3 134.654 131.825 101.342 1 69.4 ? C10 YBK 2201 A 1 
HETATM 2 N N12 YBK . . . F 3 133.492 128.224 101.03 1 68.06 ? N12 YBK 2201 A 1 
HETATM 3 C C13 YBK . . . F 3 133.82 127.893 99.722 1 62.61 ? C13 YBK 2201 A 1 
HETATM 4 C C17 YBK . . . F 3 136.107 127.402 93.505 1 65.7 ? C17 YBK 2201 A 1 
HETATM 5 C C20 YBK . . . F 3 137.712 126.768 91.723 1 67.06 ? C20 YBK 2201 A 1 
HETATM 6 C C21 YBK . . . F 3 139.032 126.82 91.264 1 73.02 ? C21 YBK 2201 A 1 
HETATM 7 C C22 YBK . . . F 3 139.284 127.028 89.862 1 74.63 ? C22 YBK 2201 A 1 
HETATM 8 C C28 YBK . . . F 3 135.443 126.432 87.722 1 80.69 ? C28 YBK 2201 A 1 
HETATM 9 C C01 YBK . . . F 3 132.722 124.294 99.565 1 77.4 ? C01 YBK 2201 A 1 
HETATM 10 O O02 YBK . . . F 3 132.925 125.613 100.024 1 72.08 ? O02 YBK 2201 A 1 
HETATM 11 C C03 YBK . . . F 3 133.533 126.577 99.19 1 64.36 ? C03 YBK 2201 A 1 
HETATM 12 C C04 YBK . . . F 3 133.871 126.309 97.841 1 61.02 ? C04 YBK 2201 A 1 
HETATM 13 C C05 YBK . . . F 3 134.463 127.295 97.062 1 60.24 ? C05 YBK 2201 A 1 
HETATM 14 C C06 YBK . . . F 3 134.741 128.57 97.571 1 61.64 ? C06 YBK 2201 A 1 
HETATM 15 C C07 YBK . . . F 3 134.401 128.86 98.921 1 61.34 ? C07 YBK 2201 A 1 
HETATM 16 C C08 YBK . . . F 3 134.677 130.17 99.436 1 63.36 ? C08 YBK 2201 A 1 
HETATM 17 C C09 YBK . . . F 3 134.351 130.442 100.78 1 66.88 ? C09 YBK 2201 A 1 
HETATM 18 N N11 YBK . . . F 3 133.788 129.49 101.536 1 69.58 ? N11 YBK 2201 A 1 
HETATM 19 C C14 YBK . . . F 3 134.805 126.996 95.6 1 62.08 ? C14 YBK 2201 A 1 
HETATM 20 O O15 YBK . . . F 3 134.228 126.111 95.069 1 66.05 ? O15 YBK 2201 A 1 
HETATM 21 N N16 YBK . . . F 3 135.854 127.738 94.903 1 65.24 ? N16 YBK 2201 A 1 
HETATM 22 C C18 YBK . . . F 3 137.369 126.564 93.233 1 64.08 ? C18 YBK 2201 A 1 
HETATM 23 O O19 YBK . . . F 3 138.386 127.069 94.017 1 71.53 ? O19 YBK 2201 A 1 
HETATM 24 C C23 YBK . . . F 3 138.174 127.177 89.029 1 75.93 ? C23 YBK 2201 A 1 
HETATM 25 C C25 YBK . . . F 3 136.873 127.105 89.569 1 74.4 ? C25 YBK 2201 A 1 
HETATM 26 N N26 YBK . . . F 3 136.705 126.913 90.879 1 70.09 ? N26 YBK 2201 A 1 
HETATM 27 C C27 YBK . . . F 3 135.709 127.25 88.814 1 74.94 ? C27 YBK 2201 A 1 
HETATM 28 C C29 YBK . . . F 3 134.267 126.595 86.99 1 83.14 ? C29 YBK 2201 A 1 
HETATM 29 C C30 YBK . . . F 3 133.378 127.611 87.346 1 79.51 ? C30 YBK 2201 A 1 
HETATM 30 C C32 YBK . . . F 3 133.636 128.434 88.432 1 76.11 ? C32 YBK 2201 A 1 
HETATM 31 C C33 YBK . . . F 3 134.804 128.276 89.166 1 73.58 ? C33 YBK 2201 A 1 
HETATM 32 C C34 YBK . . . F 3 140.738 127.093 89.292 1 78.65 ? C34 YBK 2201 A 1 
HETATM 33 C C35 YBK . . . F 3 141.682 126.281 90.184 1 86.54 ? C35 YBK 2201 A 1 
HETATM 34 C C36 YBK . . . F 3 141.145 128.568 89.171 1 84.6 ? C36 YBK 2201 A 1 
HETATM 35 O O37 YBK . . . F 3 140.789 126.531 88.015 1 84.93 ? O37 YBK 2201 A 1 
HETATM 36 C C38 YBK . . . F 3 137.162 125.087 93.503 1 70.78 ? C38 YBK 2201 A 1 
HETATM 37 F F24 YBK . . . F 3 138.365 127.385 87.701 1 82.94 ? F24 YBK 2201 A 1 
HETATM 38 F F31 YBK . . . F 3 132.239 127.783 86.655 1 83.88 ? F31 YBK 2201 A 1 
HETATM 39 F F39 YBK . . . F 3 136.891 124.864 94.809 1 73.63 ? F39 YBK 2201 A 1 
HETATM 40 F F40 YBK . . . F 3 138.294 124.426 93.209 1 76.51 ? F40 YBK 2201 A 1 
HETATM 41 F F41 YBK . . . F 3 136.155 124.61 92.746 1 72.48 ? F41 YBK 2201 A 1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    39 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           41 
#