data_8FU3 # _model_server_result.job_id l2fKWLKBE0lN4pE-wJ5ivQ _model_server_result.datetime_utc '2024-12-27 05:02:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2201}' # _entry.id 8FU3 # _exptl.entry_id 8FU3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 576.515 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-methoxy-3-methyl-N-{(2S)-3,3,3-trifluoro-2-[5-fluoro-6-(4-fluorophenyl)-4-(2-hydroxypropan-2-yl)pyridin-2-yl]-2-hydroxypropyl}cinnoline-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FU3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H25 F5 N4 O4' _chem_comp.formula_weight 576.515 _chem_comp.id YBK _chem_comp.mon_nstd_flag . _chem_comp.name 8-methoxy-3-methyl-N-{(2S)-3,3,3-trifluoro-2-[5-fluoro-6-(4-fluorophenyl)-4-(2-hydroxypropan-2-yl)pyridin-2-yl]-2-hydroxypropyl}cinnoline-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F31 C30 YBK sing 374 n n C29 C30 YBK doub 375 n y C29 C28 YBK sing 376 n y C30 C32 YBK sing 377 n y F24 C23 YBK sing 378 n n C28 C27 YBK doub 379 n y O37 C34 YBK sing 380 n n C32 C33 YBK doub 381 n y C27 C33 YBK sing 382 n y C27 C25 YBK sing 383 n n C23 C25 YBK doub 384 n y C23 C22 YBK sing 385 n y C36 C34 YBK sing 386 n n C34 C22 YBK sing 387 n n C34 C35 YBK sing 388 n n C25 N26 YBK sing 389 n y C22 C21 YBK doub 390 n y N26 C20 YBK doub 391 n y C21 C20 YBK sing 392 n y C20 C18 YBK sing 393 n n F41 C38 YBK sing 394 n n F40 C38 YBK sing 395 n n C18 C38 YBK sing 396 n n C18 C17 YBK sing 397 n n C18 O19 YBK sing 398 n n C38 F39 YBK sing 399 n n C17 N16 YBK sing 400 n n N16 C14 YBK sing 401 n n O15 C14 YBK doub 402 n n C14 C05 YBK sing 403 n n C05 C06 YBK doub 404 n y C05 C04 YBK sing 405 n y C06 C07 YBK sing 406 n y C04 C03 YBK doub 407 n y C07 C08 YBK doub 408 n y C07 C13 YBK sing 409 n y C03 C13 YBK sing 410 n y C03 O02 YBK sing 411 n n C08 C09 YBK sing 412 n y C01 O02 YBK sing 413 n n C13 N12 YBK doub 414 n y C09 C10 YBK sing 415 n n C09 N11 YBK doub 416 n y N12 N11 YBK sing 417 n y C10 H1 YBK sing 418 n n C10 H2 YBK sing 419 n n C10 H3 YBK sing 420 n n C17 H4 YBK sing 421 n n C17 H5 YBK sing 422 n n C21 H6 YBK sing 423 n n C28 H7 YBK sing 424 n n C01 H8 YBK sing 425 n n C01 H9 YBK sing 426 n n C01 H10 YBK sing 427 n n C04 H11 YBK sing 428 n n C06 H12 YBK sing 429 n n C08 H13 YBK sing 430 n n N16 H14 YBK sing 431 n n O19 H15 YBK sing 432 n n C29 H16 YBK sing 433 n n C32 H17 YBK sing 434 n n C33 H18 YBK sing 435 n n C35 H19 YBK sing 436 n n C35 H20 YBK sing 437 n n C35 H21 YBK sing 438 n n C36 H22 YBK sing 439 n n C36 H23 YBK sing 440 n n C36 H24 YBK sing 441 n n O37 H25 YBK sing 442 n n # _atom_sites.entry_id 8FU3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id YBK _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 2201 _pdbx_nonpoly_scheme.auth_seq_num 1501 _pdbx_nonpoly_scheme.pdb_mon_id YBK _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 YBK . . . F 3 134.654 131.825 101.342 1 69.4 ? C10 YBK 2201 A 1 HETATM 2 N N12 YBK . . . F 3 133.492 128.224 101.03 1 68.06 ? N12 YBK 2201 A 1 HETATM 3 C C13 YBK . . . F 3 133.82 127.893 99.722 1 62.61 ? C13 YBK 2201 A 1 HETATM 4 C C17 YBK . . . F 3 136.107 127.402 93.505 1 65.7 ? C17 YBK 2201 A 1 HETATM 5 C C20 YBK . . . F 3 137.712 126.768 91.723 1 67.06 ? C20 YBK 2201 A 1 HETATM 6 C C21 YBK . . . F 3 139.032 126.82 91.264 1 73.02 ? C21 YBK 2201 A 1 HETATM 7 C C22 YBK . . . F 3 139.284 127.028 89.862 1 74.63 ? C22 YBK 2201 A 1 HETATM 8 C C28 YBK . . . F 3 135.443 126.432 87.722 1 80.69 ? C28 YBK 2201 A 1 HETATM 9 C C01 YBK . . . F 3 132.722 124.294 99.565 1 77.4 ? C01 YBK 2201 A 1 HETATM 10 O O02 YBK . . . F 3 132.925 125.613 100.024 1 72.08 ? O02 YBK 2201 A 1 HETATM 11 C C03 YBK . . . F 3 133.533 126.577 99.19 1 64.36 ? C03 YBK 2201 A 1 HETATM 12 C C04 YBK . . . F 3 133.871 126.309 97.841 1 61.02 ? C04 YBK 2201 A 1 HETATM 13 C C05 YBK . . . F 3 134.463 127.295 97.062 1 60.24 ? C05 YBK 2201 A 1 HETATM 14 C C06 YBK . . . F 3 134.741 128.57 97.571 1 61.64 ? C06 YBK 2201 A 1 HETATM 15 C C07 YBK . . . F 3 134.401 128.86 98.921 1 61.34 ? C07 YBK 2201 A 1 HETATM 16 C C08 YBK . . . F 3 134.677 130.17 99.436 1 63.36 ? C08 YBK 2201 A 1 HETATM 17 C C09 YBK . . . F 3 134.351 130.442 100.78 1 66.88 ? C09 YBK 2201 A 1 HETATM 18 N N11 YBK . . . F 3 133.788 129.49 101.536 1 69.58 ? N11 YBK 2201 A 1 HETATM 19 C C14 YBK . . . F 3 134.805 126.996 95.6 1 62.08 ? C14 YBK 2201 A 1 HETATM 20 O O15 YBK . . . F 3 134.228 126.111 95.069 1 66.05 ? O15 YBK 2201 A 1 HETATM 21 N N16 YBK . . . F 3 135.854 127.738 94.903 1 65.24 ? N16 YBK 2201 A 1 HETATM 22 C C18 YBK . . . F 3 137.369 126.564 93.233 1 64.08 ? C18 YBK 2201 A 1 HETATM 23 O O19 YBK . . . F 3 138.386 127.069 94.017 1 71.53 ? O19 YBK 2201 A 1 HETATM 24 C C23 YBK . . . F 3 138.174 127.177 89.029 1 75.93 ? C23 YBK 2201 A 1 HETATM 25 C C25 YBK . . . F 3 136.873 127.105 89.569 1 74.4 ? C25 YBK 2201 A 1 HETATM 26 N N26 YBK . . . F 3 136.705 126.913 90.879 1 70.09 ? N26 YBK 2201 A 1 HETATM 27 C C27 YBK . . . F 3 135.709 127.25 88.814 1 74.94 ? C27 YBK 2201 A 1 HETATM 28 C C29 YBK . . . F 3 134.267 126.595 86.99 1 83.14 ? C29 YBK 2201 A 1 HETATM 29 C C30 YBK . . . F 3 133.378 127.611 87.346 1 79.51 ? C30 YBK 2201 A 1 HETATM 30 C C32 YBK . . . F 3 133.636 128.434 88.432 1 76.11 ? C32 YBK 2201 A 1 HETATM 31 C C33 YBK . . . F 3 134.804 128.276 89.166 1 73.58 ? C33 YBK 2201 A 1 HETATM 32 C C34 YBK . . . F 3 140.738 127.093 89.292 1 78.65 ? C34 YBK 2201 A 1 HETATM 33 C C35 YBK . . . F 3 141.682 126.281 90.184 1 86.54 ? C35 YBK 2201 A 1 HETATM 34 C C36 YBK . . . F 3 141.145 128.568 89.171 1 84.6 ? C36 YBK 2201 A 1 HETATM 35 O O37 YBK . . . F 3 140.789 126.531 88.015 1 84.93 ? O37 YBK 2201 A 1 HETATM 36 C C38 YBK . . . F 3 137.162 125.087 93.503 1 70.78 ? C38 YBK 2201 A 1 HETATM 37 F F24 YBK . . . F 3 138.365 127.385 87.701 1 82.94 ? F24 YBK 2201 A 1 HETATM 38 F F31 YBK . . . F 3 132.239 127.783 86.655 1 83.88 ? F31 YBK 2201 A 1 HETATM 39 F F39 YBK . . . F 3 136.891 124.864 94.809 1 73.63 ? F39 YBK 2201 A 1 HETATM 40 F F40 YBK . . . F 3 138.294 124.426 93.209 1 76.51 ? F40 YBK 2201 A 1 HETATM 41 F F41 YBK . . . F 3 136.155 124.61 92.746 1 72.48 ? F41 YBK 2201 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 41 #