data_8FU7 # _model_server_result.job_id 76YPr7mbgUTm3cin4XzjDA _model_server_result.datetime_utc '2024-11-21 08:35:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1201}' # _entry.id 8FU7 # _exptl.entry_id 8FU7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 48 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FU7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 HA N N ? 2 IA N N ? 2 JA N N ? 2 KA N N ? 2 LA N N ? 2 MA N N ? 2 NA N N ? 2 OA N N ? 2 PA N N ? 2 QA N N ? 2 RA N N ? 2 SA N N ? 2 TA N N ? 2 UA N N ? 2 VA N N ? 2 WA N N ? 2 XA N N ? 2 YA N N # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 235 n n C1 O1 NAG sing 236 n n C1 O5 NAG sing 237 n n C1 H1 NAG sing 238 n n C2 C3 NAG sing 239 n n C2 N2 NAG sing 240 n n C2 H2 NAG sing 241 n n C3 C4 NAG sing 242 n n C3 O3 NAG sing 243 n n C3 H3 NAG sing 244 n n C4 C5 NAG sing 245 n n C4 O4 NAG sing 246 n n C4 H4 NAG sing 247 n n C5 C6 NAG sing 248 n n C5 O5 NAG sing 249 n n C5 H5 NAG sing 250 n n C6 O6 NAG sing 251 n n C6 H61 NAG sing 252 n n C6 H62 NAG sing 253 n n C7 C8 NAG sing 254 n n C7 N2 NAG sing 255 n n C7 O7 NAG doub 256 n n C8 H81 NAG sing 257 n n C8 H82 NAG sing 258 n n C8 H83 NAG sing 259 n n N2 HN2 NAG sing 260 n n O1 HO1 NAG sing 261 n n O3 HO3 NAG sing 262 n n O4 HO4 NAG sing 263 n n O6 HO6 NAG sing 264 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8FU7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NAG A 1 1201 1195 NAG NAG . E 2 NAG A 1 1202 1196 NAG NAG . F 2 NAG A 1 1203 1201 NAG NAG . G 2 NAG A 1 1204 1202 NAG NAG . H 2 NAG A 1 1205 1203 NAG NAG . I 2 NAG A 1 1206 1204 NAG NAG . J 2 NAG A 1 1207 1205 NAG NAG . K 2 NAG A 1 1208 1206 NAG NAG . L 2 NAG A 1 1209 1207 NAG NAG . M 2 NAG A 1 1210 1208 NAG NAG . N 2 NAG A 1 1211 1209 NAG NAG . O 2 NAG A 1 1212 1210 NAG NAG . P 2 NAG A 1 1213 1211 NAG NAG . Q 2 NAG A 1 1214 1213 NAG NAG . R 2 NAG A 1 1215 1214 NAG NAG . S 2 NAG A 1 1216 1215 NAG NAG . T 2 NAG B 1 1201 1216 NAG NAG . U 2 NAG B 1 1202 1217 NAG NAG . V 2 NAG B 1 1203 1218 NAG NAG . W 2 NAG B 1 1204 1219 NAG NAG . X 2 NAG B 1 1205 1220 NAG NAG . Y 2 NAG B 1 1206 1221 NAG NAG . Z 2 NAG B 1 1207 1222 NAG NAG . AA 2 NAG B 1 1208 1223 NAG NAG . BA 2 NAG B 1 1209 1224 NAG NAG . CA 2 NAG B 1 1210 1225 NAG NAG . DA 2 NAG B 1 1211 1226 NAG NAG . EA 2 NAG B 1 1212 1227 NAG NAG . FA 2 NAG B 1 1213 1228 NAG NAG . GA 2 NAG B 1 1214 1229 NAG NAG . HA 2 NAG B 1 1215 1230 NAG NAG . IA 2 NAG B 1 1216 1231 NAG NAG . JA 2 NAG C 1 1201 1232 NAG NAG . KA 2 NAG C 1 1202 1233 NAG NAG . LA 2 NAG C 1 1203 1234 NAG NAG . MA 2 NAG C 1 1204 1235 NAG NAG . NA 2 NAG C 1 1205 1236 NAG NAG . OA 2 NAG C 1 1206 1237 NAG NAG . PA 2 NAG C 1 1207 1238 NAG NAG . QA 2 NAG C 1 1208 1239 NAG NAG . RA 2 NAG C 1 1209 1240 NAG NAG . SA 2 NAG C 1 1210 1241 NAG NAG . TA 2 NAG C 1 1211 1242 NAG NAG . UA 2 NAG C 1 1212 1243 NAG NAG . VA 2 NAG C 1 1213 1244 NAG NAG . WA 2 NAG C 1 1214 1245 NAG NAG . XA 2 NAG C 1 1215 1246 NAG NAG . YA 2 NAG C 1 1216 1247 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . D 2 158.151 141.846 207.435 1 115.58 ? C1 NAG 1201 A 1 HETATM 2 C C2 NAG . . . D 2 159.551 142.117 208.079 1 115.58 ? C2 NAG 1201 A 1 HETATM 3 C C3 NAG . . . D 2 159.462 141.8 209.592 1 113.67 ? C3 NAG 1201 A 1 HETATM 4 C C4 NAG . . . D 2 158.376 142.701 210.218 1 117.93 ? C4 NAG 1201 A 1 HETATM 5 C C5 NAG . . . D 2 157.026 142.423 209.513 1 125.68 ? C5 NAG 1201 A 1 HETATM 6 C C6 NAG . . . D 2 155.923 143.321 210.043 1 114.96 ? C6 NAG 1201 A 1 HETATM 7 C C7 NAG . . . D 2 161.803 141.643 207.285 1 99.98 ? C7 NAG 1201 A 1 HETATM 8 C C8 NAG . . . D 2 162.808 140.77 206.593 1 96.31 ? C8 NAG 1201 A 1 HETATM 9 N N2 NAG . . . D 2 160.541 141.247 207.428 1 97.03 ? N2 NAG 1201 A 1 HETATM 10 O O1 NAG . . . D 2 158.205 142.155 205.988 1 94.22 ? O1 NAG 1201 A 1 HETATM 11 O O3 NAG . . . D 2 160.722 142.059 210.226 1 102.05 ? O3 NAG 1201 A 1 HETATM 12 O O4 NAG . . . D 2 158.274 142.406 211.608 1 109.39 ? O4 NAG 1201 A 1 HETATM 13 O O5 NAG . . . D 2 157.152 142.679 208.07 1 111.75 ? O5 NAG 1201 A 1 HETATM 14 O O6 NAG . . . D 2 155.69 143.098 211.429 1 108.34 ? O6 NAG 1201 A 1 HETATM 15 O O7 NAG . . . D 2 162.163 142.742 207.728 1 95.05 ? O7 NAG 1201 A 1 # _model_server_stats.io_time_ms 90 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #