data_8FUF
#
_model_server_result.job_id            1iKo27aIBqEQbaKoqT2xRw 
_model_server_result.datetime_utc      '2024-11-24 02:57:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fuf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1201}' 
#
_entry.id    8FUF 
#
_exptl.entry_id    8FUF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              607.354 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8FUF 
_cell.length_a            274.011 
_cell.length_b            274.011 
_cell.length_c            143.078 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FUF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    'P 3 2"' 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I 1 1 
C,D,J 2 1 
E,F,K 3 1 
G,H,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C17 H27 N3 O17 P2' 
_chem_comp.formula_weight    607.354 
_chem_comp.id                UD1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1' C2' UD1 sing 356 n n 
C1' O1' UD1 sing 357 n n 
C1' O5' UD1 sing 358 n n 
C1' H1' UD1 sing 359 n n 
C2' C3' UD1 sing 360 n n 
C2' N2' UD1 sing 361 n n 
C2' H2' UD1 sing 362 n n 
C3' C4' UD1 sing 363 n n 
C3' O3' UD1 sing 364 n n 
C3' H3' UD1 sing 365 n n 
C4' C5' UD1 sing 366 n n 
C4' O4' UD1 sing 367 n n 
C4' H4' UD1 sing 368 n n 
C5' C6' UD1 sing 369 n n 
C5' O5' UD1 sing 370 n n 
C5' H5' UD1 sing 371 n n 
C6' O6' UD1 sing 372 n n 
C6' "H6'1" UD1 sing 373 n n 
C6' "H6'2" UD1 sing 374 n n 
C7' C8' UD1 sing 375 n n 
C7' N2' UD1 sing 376 n n 
C7' O7' UD1 doub 377 n n 
C8' "H8'1" UD1 sing 378 n n 
C8' "H8'2" UD1 sing 379 n n 
C8' "H8'3" UD1 sing 380 n n 
N2' HN2' UD1 sing 381 n n 
O1' PB UD1 sing 382 n n 
O3' HO3' UD1 sing 383 n n 
O4' HO4' UD1 sing 384 n n 
O6' HO6' UD1 sing 385 n n 
N1 C2 UD1 sing 386 n n 
N1 C6 UD1 sing 387 n n 
N1 C1B UD1 sing 388 n n 
C2 N3 UD1 sing 389 n n 
C2 O2 UD1 doub 390 n n 
N3 C4 UD1 sing 391 n n 
N3 HN3 UD1 sing 392 n n 
C4 C5 UD1 sing 393 n n 
C4 O4 UD1 doub 394 n n 
C5 C6 UD1 doub 395 n n 
C5 H5 UD1 sing 396 n n 
C6 H6 UD1 sing 397 n n 
C1B C2B UD1 sing 398 n n 
C1B O4B UD1 sing 399 n n 
C1B H1B UD1 sing 400 n n 
C2B O2' UD1 sing 401 n n 
C2B C3B UD1 sing 402 n n 
C2B H2B UD1 sing 403 n n 
O2' HO2' UD1 sing 404 n n 
C3B C4B UD1 sing 405 n n 
C3B O3B UD1 sing 406 n n 
C3B H3B UD1 sing 407 n n 
C4B O4B UD1 sing 408 n n 
C4B C5B UD1 sing 409 n n 
C4B H4B UD1 sing 410 n n 
O3B HO3A UD1 sing 411 n n 
C5B O5B UD1 sing 412 n n 
C5B "H5'1" UD1 sing 413 n n 
C5B "H5'2" UD1 sing 414 n n 
O5B PA UD1 sing 415 n n 
PA O1A UD1 doub 416 n n 
PA O2A UD1 sing 417 n n 
PA O3A UD1 sing 418 n n 
O2A HOA2 UD1 sing 419 n n 
O3A PB UD1 sing 420 n n 
PB O1B UD1 doub 421 n n 
PB O2B UD1 sing 422 n n 
O2B HOB2 UD1 sing 423 n n 
#
_atom_sites.entry_id                     8FUF 
_atom_sites.fract_transf_matrix[1][1]    0.003649 
_atom_sites.fract_transf_matrix[1][2]    0.002107 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004214 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006989 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 UD1 A 1 1201 1201 UD1 UD1 . 
J 3 UD1 C 1 1201 1201 UD1 UD1 . 
K 3 UD1 E 1 1201 1201 UD1 UD1 . 
L 3 UD1 G 1 1201 1201 UD1 UD1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1' UD1 . . . L 3 -91.062 101.763 106.176 1 220.04 ? C1' UD1 1201 G 1 
HETATM 2 C C2' UD1 . . . L 3 -91.398 100.673 105.186 0.39 238.81 ? C2' UD1 1201 G 1 
HETATM 3 C C3' UD1 . . . L 3 -91.816 101.35 103.891 0.56 212.95 ? C3' UD1 1201 G 1 
HETATM 4 C C4' UD1 . . . L 3 -93.052 102.197 104.161 1 186.95 ? C4' UD1 1201 G 1 
HETATM 5 C C5' UD1 . . . L 3 -92.822 103.163 105.327 0.81 194.37 ? C5' UD1 1201 G 1 
HETATM 6 C C6' UD1 . . . L 3 -94.111 103.781 105.817 0.83 148.7 ? C6' UD1 1201 G 1 
HETATM 7 C C7' UD1 . . . L 3 -89.605 99.184 105.952 0.79 213.17 ? C7' UD1 1201 G 1 
HETATM 8 C C8' UD1 . . . L 3 -88.533 98.229 105.533 1 184.37 ? C8' UD1 1201 G 1 
HETATM 9 N N2' UD1 . . . L 3 -90.302 99.746 104.961 0.45 251.53 ? N2' UD1 1201 G 1 
HETATM 10 O O1' UD1 . . . L 3 -90.081 102.603 105.581 0.64 184.76 ? O1' UD1 1201 G 1 
HETATM 11 O O3' UD1 . . . L 3 -92.083 100.368 102.897 1 193.41 ? O3' UD1 1201 G 1 
HETATM 12 O O4' UD1 . . . L 3 -93.39 102.943 102.997 0.75 175.21 ? O4' UD1 1201 G 1 
HETATM 13 O O5' UD1 . . . L 3 -92.239 102.492 106.467 0.06 223.73 ? O5' UD1 1201 G 1 
HETATM 14 O O6' UD1 . . . L 3 -95.167 102.829 105.819 1 130.5 ? O6' UD1 1201 G 1 
HETATM 15 O O7' UD1 . . . L 3 -89.827 99.437 107.133 1 190.47 ? O7' UD1 1201 G 1 
HETATM 16 N N1 UD1 . . . L 3 -88.151 107.526 113.368 1 154.81 ? N1 UD1 1201 G 1 
HETATM 17 C C2 UD1 . . . L 3 -88.302 108.28 114.515 1 135.76 ? C2 UD1 1201 G 1 
HETATM 18 N N3 UD1 . . . L 3 -87.138 108.551 115.191 1 136.01 ? N3 UD1 1201 G 1 
HETATM 19 C C4 UD1 . . . L 3 -85.864 108.15 114.84 1 151.19 ? C4 UD1 1201 G 1 
HETATM 20 C C5 UD1 . . . L 3 -85.789 107.369 113.639 1 151.75 ? C5 UD1 1201 G 1 
HETATM 21 C C6 UD1 . . . L 3 -86.914 107.086 112.955 1 137.84 ? C6 UD1 1201 G 1 
HETATM 22 O O2 UD1 . . . L 3 -89.388 108.682 114.907 1 120.79 ? O2 UD1 1201 G 1 
HETATM 23 O O4 UD1 . . . L 3 -84.901 108.475 115.552 1 139.25 ? O4 UD1 1201 G 1 
HETATM 24 C C1B UD1 . . . L 3 -89.37 107.199 112.607 1 143.76 ? C1B UD1 1201 G 1 
HETATM 25 C C2B UD1 . . . L 3 -89.462 107.877 111.242 1 116.59 ? C2B UD1 1201 G 1 
HETATM 26 O O2' UD1 . . . L 3 -90.019 109.181 111.362 1 139.28 ? O2' UD1 1201 G 1 
HETATM 27 C C3B UD1 . . . L 3 -90.413 106.924 110.514 1 101.11 ? C3B UD1 1201 G 1 
HETATM 28 C C4B UD1 . . . L 3 -90.016 105.555 111.073 1 91.48 ? C4B UD1 1201 G 1 
HETATM 29 O O4B UD1 . . . L 3 -89.38 105.809 112.348 1 109.93 ? O4B UD1 1201 G 1 
HETATM 30 O O3B UD1 . . . L 3 -91.773 107.221 110.809 1 112.91 ? O3B UD1 1201 G 1 
HETATM 31 C C5B UD1 . . . L 3 -89.094 104.739 110.2 1 105.01 ? C5B UD1 1201 G 1 
HETATM 32 O O5B UD1 . . . L 3 -89.863 103.784 109.437 1 115.72 ? O5B UD1 1201 G 1 
HETATM 33 P PA UD1 . . . L 3 -89.484 102.248 109.424 1 117.66 ? PA UD1 1201 G 1 
HETATM 34 O O1A UD1 . . . L 3 -90.581 101.395 109.924 1 171.26 -1 O1A UD1 1201 G 1 
HETATM 35 O O2A UD1 . . . L 3 -88.158 102.084 110.166 1 127.94 ? O2A UD1 1201 G 1 
HETATM 36 O O3A UD1 . . . L 3 -89.191 101.937 107.894 1 174.5 ? O3A UD1 1201 G 1 
HETATM 37 P PB UD1 . . . L 3 -88.892 102.776 106.576 1 110.5 ? PB UD1 1201 G 1 
HETATM 38 O O1B UD1 . . . L 3 -87.611 102.37 105.963 1 176.69 -1 O1B UD1 1201 G 1 
HETATM 39 O O2B UD1 . . . L 3 -88.887 104.245 107.001 1 116.49 ? O2B UD1 1201 G 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#