data_8FUZ # _model_server_result.job_id q3vUCEj63Ujenyu_6MwW6Q _model_server_result.datetime_utc '2024-10-26 02:33:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fuz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":602}' # _entry.id 8FUZ # _exptl.entry_id 8FUZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 663.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FUZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FUZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 336 A CYS 331 1_555 I C2 IMP . A IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale2 B SG CYS 336 B CYS 331 1_555 K C2 IMP . B IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale3 C SG CYS 336 C CYS 331 1_555 M C2 IMP . C IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 D SG CYS 336 D CYS 331 1_555 O C2 IMP . D IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale5 E SG CYS 336 E CYS 331 1_555 Q C2 IMP . E IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale6 F SG CYS 336 F CYS 331 1_555 S C2 IMP . F IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale7 G SG CYS 336 G CYS 331 1_555 U C2 IMP . G IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale8 H SG CYS 336 H CYS 331 1_555 W C2 IMP . H IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8FUZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 IMP A 1 601 601 IMP IMP . J 3 NAD A 1 602 602 NAD NAD . K 2 IMP B 1 601 601 IMP IMP . L 3 NAD B 1 602 602 NAD NAD . M 2 IMP C 1 601 601 IMP IMP . N 3 NAD C 1 602 602 NAD NAD . O 2 IMP D 1 601 601 IMP IMP . P 3 NAD D 1 602 602 NAD NAD . Q 2 IMP E 1 601 601 IMP IMP . R 3 NAD E 1 602 602 NAD NAD . S 2 IMP F 1 601 601 IMP IMP . T 3 NAD F 1 602 602 NAD NAD . U 2 IMP G 1 601 601 IMP IMP . V 3 NAD G 1 602 602 NAD NAD . W 2 IMP H 1 601 601 IMP IMP . X 3 NAD H 1 602 602 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . J 3 201.054 155.664 142.99 1 35.34 ? PA NAD 602 A 1 HETATM 2 O O1A NAD . . . J 3 201.539 156.125 144.3 1 29.1 ? O1A NAD 602 A 1 HETATM 3 O O2A NAD . . . J 3 201.898 155.269 141.838 1 25.94 ? O2A NAD 602 A 1 HETATM 4 O O5B NAD . . . J 3 200.179 154.374 143.296 1 31.34 ? O5B NAD 602 A 1 HETATM 5 C C5B NAD . . . J 3 200.506 153.175 142.636 1 22.68 ? C5B NAD 602 A 1 HETATM 6 C C4B NAD . . . J 3 200.272 151.977 143.526 1 25.22 ? C4B NAD 602 A 1 HETATM 7 O O4B NAD . . . J 3 201.529 151.534 144.016 1 30.59 ? O4B NAD 602 A 1 HETATM 8 C C3B NAD . . . J 3 199.435 152.29 144.749 1 24.97 ? C3B NAD 602 A 1 HETATM 9 O O3B NAD . . . J 3 198.697 151.105 145.004 1 24.87 ? O3B NAD 602 A 1 HETATM 10 C C2B NAD . . . J 3 200.476 152.528 145.818 1 26.44 ? C2B NAD 602 A 1 HETATM 11 O O2B NAD . . . J 3 199.963 152.331 147.126 1 22.96 ? O2B NAD 602 A 1 HETATM 12 C C1B NAD . . . J 3 201.569 151.557 145.423 1 25.52 ? C1B NAD 602 A 1 HETATM 13 N N9A NAD . . . J 3 202.922 151.968 145.823 1 23.38 ? N9A NAD 602 A 1 HETATM 14 C C8A NAD . . . J 3 203.376 153.211 145.906 1 27.61 ? C8A NAD 602 A 1 HETATM 15 N N7A NAD . . . J 3 204.656 153.217 146.304 1 24.28 ? N7A NAD 602 A 1 HETATM 16 C C5A NAD . . . J 3 205.042 151.964 146.482 1 24.34 ? C5A NAD 602 A 1 HETATM 17 C C6A NAD . . . J 3 206.272 151.276 146.896 1 22.73 ? C6A NAD 602 A 1 HETATM 18 N N6A NAD . . . J 3 207.38 151.938 147.217 1 25.43 ? N6A NAD 602 A 1 HETATM 19 N N1A NAD . . . J 3 206.228 149.943 146.946 1 24.25 ? N1A NAD 602 A 1 HETATM 20 C C2A NAD . . . J 3 205.135 149.244 146.639 1 23.71 ? C2A NAD 602 A 1 HETATM 21 N N3A NAD . . . J 3 203.999 149.81 146.244 1 24.54 ? N3A NAD 602 A 1 HETATM 22 C C4A NAD . . . J 3 203.891 151.14 146.159 1 24.68 ? C4A NAD 602 A 1 HETATM 23 O O3 NAD . . . J 3 200.12 156.808 142.424 1 32.31 ? O3 NAD 602 A 1 HETATM 24 P PN NAD . . . J 3 198.562 156.804 142.433 1 37.29 ? PN NAD 602 A 1 HETATM 25 O O1N NAD . . . J 3 198.122 157.541 143.638 1 30.82 ? O1N NAD 602 A 1 HETATM 26 O O2N NAD . . . J 3 198.068 155.419 142.22 1 34.01 ? O2N NAD 602 A 1 HETATM 27 O O5D NAD . . . J 3 198.223 157.721 141.166 1 34.17 ? O5D NAD 602 A 1 HETATM 28 C C5D NAD . . . J 3 199.206 158.194 140.244 1 27.03 ? C5D NAD 602 A 1 HETATM 29 C C4D NAD . . . J 3 199.086 159.627 139.705 1 23.55 ? C4D NAD 602 A 1 HETATM 30 O O4D NAD . . . J 3 197.765 160.088 139.466 1 26.39 ? O4D NAD 602 A 1 HETATM 31 C C3D NAD . . . J 3 199.697 160.674 140.604 1 25.08 ? C3D NAD 602 A 1 HETATM 32 O O3D NAD . . . J 3 200.114 161.73 139.755 1 27.3 ? O3D NAD 602 A 1 HETATM 33 C C2D NAD . . . J 3 198.522 161.213 141.379 1 25.41 ? C2D NAD 602 A 1 HETATM 34 O O2D NAD . . . J 3 198.791 162.529 141.887 1 29.73 ? O2D NAD 602 A 1 HETATM 35 C C1D NAD . . . J 3 197.42 161.167 140.335 1 24.49 ? C1D NAD 602 A 1 HETATM 36 N N1N NAD . . . J 3 196.135 160.951 140.971 1 21.8 ? N1N NAD 602 A 1 HETATM 37 C C2N NAD . . . J 3 195.67 161.858 141.838 1 20.89 ? C2N NAD 602 A 1 HETATM 38 C C3N NAD . . . J 3 194.449 161.67 142.458 1 24.84 ? C3N NAD 602 A 1 HETATM 39 C C7N NAD . . . J 3 193.874 162.635 143.445 1 24.98 ? C7N NAD 602 A 1 HETATM 40 O O7N NAD . . . J 3 192.715 162.516 143.743 1 27.02 ? O7N NAD 602 A 1 HETATM 41 N N7N NAD . . . J 3 194.619 163.584 143.987 1 18.37 ? N7N NAD 602 A 1 HETATM 42 C C4N NAD . . . J 3 193.717 160.542 142.157 1 23.65 ? C4N NAD 602 A 1 HETATM 43 C C5N NAD . . . J 3 194.219 159.617 141.26 1 22.62 ? C5N NAD 602 A 1 HETATM 44 C C6N NAD . . . J 3 195.444 159.855 140.688 1 20.49 ? C6N NAD 602 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 44 #