data_8FUZ # _model_server_result.job_id eGYqo6KZLKYjvZdlHoXULA _model_server_result.datetime_utc '2024-10-26 02:28:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fuz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":602}' # _entry.id 8FUZ # _exptl.entry_id 8FUZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 663.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FUZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FUZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 336 A CYS 331 1_555 I C2 IMP . A IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale2 B SG CYS 336 B CYS 331 1_555 K C2 IMP . B IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale3 C SG CYS 336 C CYS 331 1_555 M C2 IMP . C IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 D SG CYS 336 D CYS 331 1_555 O C2 IMP . D IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale5 E SG CYS 336 E CYS 331 1_555 Q C2 IMP . E IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale6 F SG CYS 336 F CYS 331 1_555 S C2 IMP . F IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale7 G SG CYS 336 G CYS 331 1_555 U C2 IMP . G IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale8 H SG CYS 336 H CYS 331 1_555 W C2 IMP . H IMP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8FUZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 IMP A 1 601 601 IMP IMP . J 3 NAD A 1 602 602 NAD NAD . K 2 IMP B 1 601 601 IMP IMP . L 3 NAD B 1 602 602 NAD NAD . M 2 IMP C 1 601 601 IMP IMP . N 3 NAD C 1 602 602 NAD NAD . O 2 IMP D 1 601 601 IMP IMP . P 3 NAD D 1 602 602 NAD NAD . Q 2 IMP E 1 601 601 IMP IMP . R 3 NAD E 1 602 602 NAD NAD . S 2 IMP F 1 601 601 IMP IMP . T 3 NAD F 1 602 602 NAD NAD . U 2 IMP G 1 601 601 IMP IMP . V 3 NAD G 1 602 602 NAD NAD . W 2 IMP H 1 601 601 IMP IMP . X 3 NAD H 1 602 602 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . L 3 181.517 201.222 142.922 1 42.47 ? PA NAD 602 B 1 HETATM 2 O O1A NAD . . . L 3 181.158 201.049 144.347 1 28.7 ? O1A NAD 602 B 1 HETATM 3 O O2A NAD . . . L 3 181.192 202.477 142.197 1 39.06 ? O2A NAD 602 B 1 HETATM 4 O O5B NAD . . . L 3 183.089 201.043 142.681 1 36 ? O5B NAD 602 B 1 HETATM 5 C C5B NAD . . . L 3 183.781 199.832 142.864 1 31.33 ? C5B NAD 602 B 1 HETATM 6 C C4B NAD . . . L 3 185.113 200.027 143.559 1 33.07 ? C4B NAD 602 B 1 HETATM 7 O O4B NAD . . . L 3 185.422 201.377 143.908 1 31.38 ? O4B NAD 602 B 1 HETATM 8 C C3B NAD . . . L 3 185.017 199.272 144.864 1 33.15 ? C3B NAD 602 B 1 HETATM 9 O O3B NAD . . . L 3 186.295 198.688 145.035 1 34.03 ? O3B NAD 602 B 1 HETATM 10 C C2B NAD . . . L 3 184.727 200.39 145.842 1 31.48 ? C2B NAD 602 B 1 HETATM 11 O O2B NAD . . . L 3 184.932 200 147.19 1 32.03 ? O2B NAD 602 B 1 HETATM 12 C C1B NAD . . . L 3 185.608 201.506 145.311 1 29.97 ? C1B NAD 602 B 1 HETATM 13 N N9A NAD . . . L 3 185.232 202.866 145.753 1 31.07 ? N9A NAD 602 B 1 HETATM 14 C C8A NAD . . . L 3 183.994 203.332 145.86 1 31.5 ? C8A NAD 602 B 1 HETATM 15 N N7A NAD . . . L 3 183.991 204.605 146.283 1 30.93 ? N7A NAD 602 B 1 HETATM 16 C C5A NAD . . . L 3 185.245 204.988 146.461 1 31.17 ? C5A NAD 602 B 1 HETATM 17 C C6A NAD . . . L 3 185.933 206.215 146.894 1 30.3 ? C6A NAD 602 B 1 HETATM 18 N N6A NAD . . . L 3 185.276 207.317 147.243 1 26.9 ? N6A NAD 602 B 1 HETATM 19 N N1A NAD . . . L 3 187.267 206.175 146.938 1 31.9 ? N1A NAD 602 B 1 HETATM 20 C C2A NAD . . . L 3 187.962 205.087 146.606 1 29.54 ? C2A NAD 602 B 1 HETATM 21 N N3A NAD . . . L 3 187.393 203.959 146.191 1 27.16 ? N3A NAD 602 B 1 HETATM 22 C C4A NAD . . . L 3 186.063 203.838 146.108 1 29.89 ? C4A NAD 602 B 1 HETATM 23 O O3 NAD . . . L 3 180.815 200.096 142.057 1 42.91 ? O3 NAD 602 B 1 HETATM 24 P PN NAD . . . L 3 180.471 198.606 142.437 1 45.35 ? PN NAD 602 B 1 HETATM 25 O O1N NAD . . . L 3 179.66 198.444 143.665 1 29.59 ? O1N NAD 602 B 1 HETATM 26 O O2N NAD . . . L 3 181.74 197.837 142.334 1 42.35 ? O2N NAD 602 B 1 HETATM 27 O O5D NAD . . . L 3 179.541 198.131 141.233 1 39.4 ? O5D NAD 602 B 1 HETATM 28 C C5D NAD . . . L 3 179.226 198.883 140.059 1 32.85 ? C5D NAD 602 B 1 HETATM 29 C C4D NAD . . . L 3 177.724 199.001 139.891 1 33.1 ? C4D NAD 602 B 1 HETATM 30 O O4D NAD . . . L 3 177.086 197.808 139.45 1 32.26 ? O4D NAD 602 B 1 HETATM 31 C C3D NAD . . . L 3 177.178 199.308 141.257 1 34.85 ? C3D NAD 602 B 1 HETATM 32 O O3D NAD . . . L 3 176.811 200.67 141.239 1 37.06 ? O3D NAD 602 B 1 HETATM 33 C C2D NAD . . . L 3 176.05 198.323 141.519 1 35.6 ? C2D NAD 602 B 1 HETATM 34 O O2D NAD . . . L 3 174.764 198.89 141.786 1 35.57 ? O2D NAD 602 B 1 HETATM 35 C C1D NAD . . . L 3 176.027 197.407 140.318 1 29.62 ? C1D NAD 602 B 1 HETATM 36 N N1N NAD . . . L 3 176.257 196.121 140.932 1 31.15 ? N1N NAD 602 B 1 HETATM 37 C C2N NAD . . . L 3 175.358 195.659 141.812 1 29.81 ? C2N NAD 602 B 1 HETATM 38 C C3N NAD . . . L 3 175.55 194.442 142.437 1 31.24 ? C3N NAD 602 B 1 HETATM 39 C C7N NAD . . . L 3 174.583 193.868 143.427 1 30.27 ? C7N NAD 602 B 1 HETATM 40 O O7N NAD . . . L 3 174.703 192.711 143.731 1 33.64 ? O7N NAD 602 B 1 HETATM 41 N N7N NAD . . . L 3 173.631 194.613 143.967 1 29.02 ? N7N NAD 602 B 1 HETATM 42 C C4N NAD . . . L 3 176.683 193.718 142.129 1 30.18 ? C4N NAD 602 B 1 HETATM 43 C C5N NAD . . . L 3 177.603 194.228 141.228 1 29.62 ? C5N NAD 602 B 1 HETATM 44 C C6N NAD . . . L 3 177.362 195.451 140.653 1 30.36 ? C6N NAD 602 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #