data_8FVP
#
_model_server_result.job_id            wJr72E4FcEoIe6cZmjRHEA 
_model_server_result.datetime_utc      '2025-03-06 08:58:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fvp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":701}' 
#
_entry.id    8FVP 
#
_exptl.entry_id    8FVP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FVP 
_cell.length_a            63.033 
_cell.length_b            70.407 
_cell.length_c            150.112 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FVP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 71 B CYS 223 1_555 B SG CYS 103 B CYS 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf2 B SG CYS 171 B CYS 323 1_555 B SG CYS 206 B CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
disulf ? disulf3 B SG CYS 223 B CYS 375 1_555 B SG CYS 226 B CYS 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
disulf ? disulf4 B SG CYS 305 B CYS 457 1_555 B SG CYS 375 B CYS 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf5 B SG CYS 325 B CYS 477 1_555 B SG CYS 374 B CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf6 B SG CYS 334 B CYS 486 1_555 B SG CYS 357 B CYS 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf7 B SG CYS 382 B CYS 534 1_555 B SG CYS 449 B CYS 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf8 B SG CYS 400 B CYS 552 1_555 B SG CYS 448 B CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf9 B SG CYS 410 B CYS 562 1_555 B SG CYS 436 B CYS 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf10 B SG CYS 456 B CYS 608 1_555 B SG CYS 527 B CYS 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf11 B SG CYS 474 B CYS 626 1_555 B SG CYS 526 B CYS 678 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf12 B SG CYS 483 B CYS 635 1_555 B SG CYS 502 B CYS 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
covale ? covale1 C C1 PPI 1 L PPI 1 1_555 C N YD5 2 L YD5 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? 
covale ? covale2 C C YD5 2 L YD5 2 1_555 C N NLE 3 L NLE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale3 C C4 YD5 2 L YD5 2 1_555 C NG DPP 7 L DPP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale4 C C NLE 3 L NLE 3 1_555 C N 7T2 4 L 7T2 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? 
covale ? covale5 C C 7T2 4 L 7T2 4 1_555 C N SER 5 L SER 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale6 C C SER 5 L SER 5 1_555 C N 7T2 6 L 7T2 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? 
covale ? covale7 C C 7T2 6 L 7T2 6 1_555 C N DPP 7 L DPP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale8 C C DPP 7 L DPP 7 1_555 C N GLY 8 L GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale9 C C GLY 8 L GLY 8 1_555 C N NH2 9 L NH2 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 B O VAL 181 B VAL 333 1_555 D CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.136 ? 
metalc ? metalc2 B O CYS 206 B CYS 358 1_555 D CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.138 ? 
metalc ? metalc3 B OD2 ASP 208 B ASP 360 1_555 D CA CA . B CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8FVP 
_atom_sites.fract_transf_matrix[1][1]    0.015865 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014203 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006662 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CA B 1 701 1 CA CA . 
E 5 HOH A 1 201 18 HOH HOH . 
E 5 HOH A 2 202 30 HOH HOH . 
E 5 HOH A 3 203 28 HOH HOH . 
E 5 HOH A 4 204 17 HOH HOH . 
E 5 HOH A 5 205 69 HOH HOH . 
E 5 HOH A 6 206 112 HOH HOH . 
E 5 HOH A 7 207 5 HOH HOH . 
E 5 HOH A 8 208 25 HOH HOH . 
E 5 HOH A 9 209 50 HOH HOH . 
E 5 HOH A 10 210 2 HOH HOH . 
E 5 HOH A 11 211 4 HOH HOH . 
E 5 HOH A 12 212 53 HOH HOH . 
E 5 HOH A 13 213 23 HOH HOH . 
E 5 HOH A 14 214 48 HOH HOH . 
E 5 HOH A 15 215 133 HOH HOH . 
E 5 HOH A 16 216 65 HOH HOH . 
E 5 HOH A 17 217 125 HOH HOH . 
E 5 HOH A 18 218 74 HOH HOH . 
E 5 HOH A 19 219 67 HOH HOH . 
E 5 HOH A 20 220 88 HOH HOH . 
E 5 HOH A 21 221 156 HOH HOH . 
E 5 HOH A 22 222 58 HOH HOH . 
E 5 HOH A 23 223 163 HOH HOH . 
E 5 HOH A 24 224 84 HOH HOH . 
F 5 HOH B 1 801 12 HOH HOH . 
F 5 HOH B 2 802 147 HOH HOH . 
F 5 HOH B 3 803 43 HOH HOH . 
F 5 HOH B 4 804 54 HOH HOH . 
F 5 HOH B 5 805 1 HOH HOH . 
F 5 HOH B 6 806 102 HOH HOH . 
F 5 HOH B 7 807 47 HOH HOH . 
F 5 HOH B 8 808 42 HOH HOH . 
F 5 HOH B 9 809 82 HOH HOH . 
F 5 HOH B 10 810 96 HOH HOH . 
F 5 HOH B 11 811 149 HOH HOH . 
F 5 HOH B 12 812 32 HOH HOH . 
F 5 HOH B 13 813 6 HOH HOH . 
F 5 HOH B 14 814 114 HOH HOH . 
F 5 HOH B 15 815 60 HOH HOH . 
F 5 HOH B 16 816 79 HOH HOH . 
F 5 HOH B 17 817 63 HOH HOH . 
F 5 HOH B 18 818 100 HOH HOH . 
F 5 HOH B 19 819 13 HOH HOH . 
F 5 HOH B 20 820 22 HOH HOH . 
F 5 HOH B 21 821 39 HOH HOH . 
F 5 HOH B 22 822 73 HOH HOH . 
F 5 HOH B 23 823 20 HOH HOH . 
F 5 HOH B 24 824 31 HOH HOH . 
F 5 HOH B 25 825 7 HOH HOH . 
F 5 HOH B 26 826 16 HOH HOH . 
F 5 HOH B 27 827 94 HOH HOH . 
F 5 HOH B 28 828 15 HOH HOH . 
F 5 HOH B 29 829 164 HOH HOH . 
F 5 HOH B 30 830 95 HOH HOH . 
F 5 HOH B 31 831 131 HOH HOH . 
F 5 HOH B 32 832 120 HOH HOH . 
F 5 HOH B 33 833 90 HOH HOH . 
F 5 HOH B 34 834 77 HOH HOH . 
F 5 HOH B 35 835 122 HOH HOH . 
F 5 HOH B 36 836 119 HOH HOH . 
F 5 HOH B 37 837 34 HOH HOH . 
F 5 HOH B 38 838 105 HOH HOH . 
F 5 HOH B 39 839 46 HOH HOH . 
F 5 HOH B 40 840 62 HOH HOH . 
F 5 HOH B 41 841 68 HOH HOH . 
F 5 HOH B 42 842 158 HOH HOH . 
F 5 HOH B 43 843 76 HOH HOH . 
F 5 HOH B 44 844 75 HOH HOH . 
F 5 HOH B 45 845 26 HOH HOH . 
F 5 HOH B 46 846 103 HOH HOH . 
F 5 HOH B 47 847 113 HOH HOH . 
F 5 HOH B 48 848 151 HOH HOH . 
F 5 HOH B 49 849 81 HOH HOH . 
F 5 HOH B 50 850 93 HOH HOH . 
F 5 HOH B 51 851 56 HOH HOH . 
F 5 HOH B 52 852 137 HOH HOH . 
F 5 HOH B 53 853 101 HOH HOH . 
F 5 HOH B 54 854 188 HOH HOH . 
F 5 HOH B 55 855 184 HOH HOH . 
F 5 HOH B 56 856 187 HOH HOH . 
F 5 HOH B 57 857 186 HOH HOH . 
G 5 HOH L 1 101 38 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -2.642 
_atom_site.Cartn_y               24.1 
_atom_site.Cartn_z               -26.089 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        46.91 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           701 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           388 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#