data_8FWZ
#
_model_server_result.job_id            p--dVzLpDjERW3FiMXG65A 
_model_server_result.datetime_utc      '2024-11-16 14:32:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fwz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    8FWZ 
#
_exptl.entry_id    8FWZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              302.224 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2R)-2-hydroxy-3-{[(4-oxo-4,5-dihydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}propyl]phosphonic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FWZ 
_cell.length_a            59.881 
_cell.length_b            80.066 
_cell.length_c            89.71 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FWZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C10 H15 N4 O5 P' 
_chem_comp.formula_weight    302.224 
_chem_comp.id                YCE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2R)-2-hydroxy-3-{[(4-oxo-4,5-dihydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}propyl]phosphonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O17 P16 YCE doub 352 n n 
O18 P16 YCE sing 353 n n 
P16 O19 YCE sing 354 n n 
P16 C15 YCE sing 355 n n 
C15 C14 YCE sing 356 n n 
C14 O20 YCE sing 357 n n 
C14 C13 YCE sing 358 n n 
C09 N08 YCE sing 359 n y 
C09 C10 YCE doub 360 n y 
N08 C07 YCE sing 361 n y 
C13 N12 YCE sing 362 n n 
C10 C11 YCE sing 363 n n 
C10 C06 YCE sing 364 n y 
C07 C06 YCE doub 365 n y 
C07 C02 YCE sing 366 n n 
N12 C11 YCE sing 367 n n 
O01 C02 YCE doub 368 n n 
C06 N05 YCE sing 369 n n 
C02 N03 YCE sing 370 n n 
N05 C04 YCE doub 371 n n 
N03 C04 YCE sing 372 n n 
N12 H121 YCE sing 373 n n 
C13 H131 YCE sing 374 n n 
C13 H132 YCE sing 375 n n 
C15 H152 YCE sing 376 n n 
C15 H151 YCE sing 377 n n 
C04 H041 YCE sing 378 n n 
C09 H091 YCE sing 379 n n 
C11 H112 YCE sing 380 n n 
C11 H111 YCE sing 381 n n 
C14 H141 YCE sing 382 n n 
N03 H031 YCE sing 383 n n 
N08 H081 YCE sing 384 n n 
O18 H2 YCE sing 385 n n 
O19 H3 YCE sing 386 n n 
O20 H201 YCE sing 387 n n 
#
_atom_sites.entry_id                     8FWZ 
_atom_sites.fract_transf_matrix[1][1]    0.0167 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01249 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011147 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 YCE A 1 301 1 YCE LIG . 
D 3 PO4 A 1 302 1 PO4 PO4 . 
E 2 YCE B 1 301 2 YCE LIG . 
F 4 HOH A 1 401 170 HOH HOH . 
F 4 HOH A 2 402 2 HOH HOH . 
F 4 HOH A 3 403 106 HOH HOH . 
F 4 HOH A 4 404 85 HOH HOH . 
F 4 HOH A 5 405 171 HOH HOH . 
F 4 HOH A 6 406 1 HOH HOH . 
F 4 HOH A 7 407 93 HOH HOH . 
F 4 HOH A 8 408 98 HOH HOH . 
F 4 HOH A 9 409 28 HOH HOH . 
F 4 HOH A 10 410 141 HOH HOH . 
F 4 HOH A 11 411 101 HOH HOH . 
F 4 HOH A 12 412 107 HOH HOH . 
F 4 HOH A 13 413 108 HOH HOH . 
F 4 HOH A 14 414 84 HOH HOH . 
F 4 HOH A 15 415 19 HOH HOH . 
F 4 HOH A 16 416 104 HOH HOH . 
F 4 HOH A 17 417 45 HOH HOH . 
F 4 HOH A 18 418 156 HOH HOH . 
F 4 HOH A 19 419 24 HOH HOH . 
F 4 HOH A 20 420 113 HOH HOH . 
F 4 HOH A 21 421 97 HOH HOH . 
F 4 HOH A 22 422 17 HOH HOH . 
F 4 HOH A 23 423 26 HOH HOH . 
F 4 HOH A 24 424 96 HOH HOH . 
F 4 HOH A 25 425 91 HOH HOH . 
F 4 HOH A 26 426 157 HOH HOH . 
F 4 HOH A 27 427 47 HOH HOH . 
F 4 HOH A 28 428 3 HOH HOH . 
F 4 HOH A 29 429 72 HOH HOH . 
F 4 HOH A 30 430 105 HOH HOH . 
F 4 HOH A 31 431 120 HOH HOH . 
F 4 HOH A 32 432 30 HOH HOH . 
F 4 HOH A 33 433 55 HOH HOH . 
F 4 HOH A 34 434 68 HOH HOH . 
F 4 HOH A 35 435 13 HOH HOH . 
F 4 HOH A 36 436 133 HOH HOH . 
F 4 HOH A 37 437 144 HOH HOH . 
F 4 HOH A 38 438 60 HOH HOH . 
F 4 HOH A 39 439 146 HOH HOH . 
F 4 HOH A 40 440 75 HOH HOH . 
F 4 HOH A 41 441 165 HOH HOH . 
F 4 HOH A 42 442 34 HOH HOH . 
F 4 HOH A 43 443 83 HOH HOH . 
F 4 HOH A 44 444 32 HOH HOH . 
F 4 HOH A 45 445 126 HOH HOH . 
F 4 HOH A 46 446 43 HOH HOH . 
F 4 HOH A 47 447 121 HOH HOH . 
F 4 HOH A 48 448 148 HOH HOH . 
F 4 HOH A 49 449 175 HOH HOH . 
F 4 HOH A 50 450 29 HOH HOH . 
F 4 HOH A 51 451 102 HOH HOH . 
F 4 HOH A 52 452 129 HOH HOH . 
F 4 HOH A 53 453 65 HOH HOH . 
F 4 HOH A 54 454 42 HOH HOH . 
F 4 HOH A 55 455 35 HOH HOH . 
F 4 HOH A 56 456 94 HOH HOH . 
F 4 HOH A 57 457 51 HOH HOH . 
F 4 HOH A 58 458 50 HOH HOH . 
F 4 HOH A 59 459 95 HOH HOH . 
F 4 HOH A 60 460 151 HOH HOH . 
F 4 HOH A 61 461 4 HOH HOH . 
F 4 HOH A 62 462 111 HOH HOH . 
F 4 HOH A 63 463 131 HOH HOH . 
F 4 HOH A 64 464 49 HOH HOH . 
F 4 HOH A 65 465 176 HOH HOH . 
F 4 HOH A 66 466 81 HOH HOH . 
F 4 HOH A 67 467 124 HOH HOH . 
F 4 HOH A 68 468 162 HOH HOH . 
F 4 HOH A 69 469 100 HOH HOH . 
F 4 HOH A 70 470 112 HOH HOH . 
F 4 HOH A 71 471 168 HOH HOH . 
F 4 HOH A 72 472 138 HOH HOH . 
F 4 HOH A 73 473 63 HOH HOH . 
G 4 HOH B 1 401 172 HOH HOH . 
G 4 HOH B 2 402 18 HOH HOH . 
G 4 HOH B 3 403 10 HOH HOH . 
G 4 HOH B 4 404 158 HOH HOH . 
G 4 HOH B 5 405 174 HOH HOH . 
G 4 HOH B 6 406 118 HOH HOH . 
G 4 HOH B 7 407 7 HOH HOH . 
G 4 HOH B 8 408 109 HOH HOH . 
G 4 HOH B 9 409 48 HOH HOH . 
G 4 HOH B 10 410 103 HOH HOH . 
G 4 HOH B 11 411 160 HOH HOH . 
G 4 HOH B 12 412 143 HOH HOH . 
G 4 HOH B 13 413 154 HOH HOH . 
G 4 HOH B 14 414 163 HOH HOH . 
G 4 HOH B 15 415 54 HOH HOH . 
G 4 HOH B 16 416 167 HOH HOH . 
G 4 HOH B 17 417 64 HOH HOH . 
G 4 HOH B 18 418 155 HOH HOH . 
G 4 HOH B 19 419 139 HOH HOH . 
G 4 HOH B 20 420 74 HOH HOH . 
G 4 HOH B 21 421 57 HOH HOH . 
G 4 HOH B 22 422 21 HOH HOH . 
G 4 HOH B 23 423 142 HOH HOH . 
G 4 HOH B 24 424 15 HOH HOH . 
G 4 HOH B 25 425 69 HOH HOH . 
G 4 HOH B 26 426 5 HOH HOH . 
G 4 HOH B 27 427 78 HOH HOH . 
G 4 HOH B 28 428 61 HOH HOH . 
G 4 HOH B 29 429 80 HOH HOH . 
G 4 HOH B 30 430 123 HOH HOH . 
G 4 HOH B 31 431 62 HOH HOH . 
G 4 HOH B 32 432 153 HOH HOH . 
G 4 HOH B 33 433 114 HOH HOH . 
G 4 HOH B 34 434 16 HOH HOH . 
G 4 HOH B 35 435 115 HOH HOH . 
G 4 HOH B 36 436 36 HOH HOH . 
G 4 HOH B 37 437 40 HOH HOH . 
G 4 HOH B 38 438 23 HOH HOH . 
G 4 HOH B 39 439 27 HOH HOH . 
G 4 HOH B 40 440 152 HOH HOH . 
G 4 HOH B 41 441 82 HOH HOH . 
G 4 HOH B 42 442 178 HOH HOH . 
G 4 HOH B 43 443 22 HOH HOH . 
G 4 HOH B 44 444 145 HOH HOH . 
G 4 HOH B 45 445 89 HOH HOH . 
G 4 HOH B 46 446 76 HOH HOH . 
G 4 HOH B 47 447 6 HOH HOH . 
G 4 HOH B 48 448 41 HOH HOH . 
G 4 HOH B 49 449 20 HOH HOH . 
G 4 HOH B 50 450 46 HOH HOH . 
G 4 HOH B 51 451 79 HOH HOH . 
G 4 HOH B 52 452 38 HOH HOH . 
G 4 HOH B 53 453 166 HOH HOH . 
G 4 HOH B 54 454 14 HOH HOH . 
G 4 HOH B 55 455 53 HOH HOH . 
G 4 HOH B 56 456 70 HOH HOH . 
G 4 HOH B 57 457 90 HOH HOH . 
G 4 HOH B 58 458 147 HOH HOH . 
G 4 HOH B 59 459 130 HOH HOH . 
G 4 HOH B 60 460 31 HOH HOH . 
G 4 HOH B 61 461 177 HOH HOH . 
G 4 HOH B 62 462 116 HOH HOH . 
G 4 HOH B 63 463 9 HOH HOH . 
G 4 HOH B 64 464 11 HOH HOH . 
G 4 HOH B 65 465 99 HOH HOH . 
G 4 HOH B 66 466 92 HOH HOH . 
G 4 HOH B 67 467 125 HOH HOH . 
G 4 HOH B 68 468 117 HOH HOH . 
G 4 HOH B 69 469 149 HOH HOH . 
G 4 HOH B 70 470 135 HOH HOH . 
G 4 HOH B 71 471 88 HOH HOH . 
G 4 HOH B 72 472 71 HOH HOH . 
G 4 HOH B 73 473 87 HOH HOH . 
G 4 HOH B 74 474 86 HOH HOH . 
G 4 HOH B 75 475 37 HOH HOH . 
G 4 HOH B 76 476 161 HOH HOH . 
G 4 HOH B 77 477 59 HOH HOH . 
G 4 HOH B 78 478 52 HOH HOH . 
G 4 HOH B 79 479 8 HOH HOH . 
G 4 HOH B 80 480 122 HOH HOH . 
G 4 HOH B 81 481 159 HOH HOH . 
G 4 HOH B 82 482 39 HOH HOH . 
G 4 HOH B 83 483 77 HOH HOH . 
G 4 HOH B 84 484 173 HOH HOH . 
G 4 HOH B 85 485 12 HOH HOH . 
G 4 HOH B 86 486 66 HOH HOH . 
G 4 HOH B 87 487 110 HOH HOH . 
G 4 HOH B 88 488 33 HOH HOH . 
G 4 HOH B 89 489 127 HOH HOH . 
G 4 HOH B 90 490 67 HOH HOH . 
G 4 HOH B 91 491 164 HOH HOH . 
G 4 HOH B 92 492 119 HOH HOH . 
G 4 HOH B 93 493 25 HOH HOH . 
G 4 HOH B 94 494 132 HOH HOH . 
G 4 HOH B 95 495 128 HOH HOH . 
G 4 HOH B 96 496 140 HOH HOH . 
G 4 HOH B 97 497 44 HOH HOH . 
G 4 HOH B 98 498 150 HOH HOH . 
G 4 HOH B 99 499 137 HOH HOH . 
G 4 HOH B 100 500 136 HOH HOH . 
G 4 HOH B 101 501 56 HOH HOH . 
G 4 HOH B 102 502 169 HOH HOH . 
G 4 HOH B 103 503 134 HOH HOH . 
G 4 HOH B 104 504 58 HOH HOH . 
G 4 HOH B 105 505 73 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 YCE . . . C 2 -1.016 106.725 104.749 1 52.8 ? C10 YCE 301 A 1 
HETATM 2 N N12 YCE . . . C 2 1.149 107.88 105.035 1 51.64 ? N12 YCE 301 A 1 
HETATM 3 C C13 YCE . . . C 2 1.641 107.411 103.739 1 52.22 ? C13 YCE 301 A 1 
HETATM 4 C C15 YCE . . . C 2 1.749 107.826 101.223 1 39.59 ? C15 YCE 301 A 1 
HETATM 5 C C02 YCE . . . C 2 -2.41 103.591 105.771 1 35.4 ? C02 YCE 301 A 1 
HETATM 6 C C04 YCE . . . C 2 -1.548 104.465 107.865 1 35.1 ? C04 YCE 301 A 1 
HETATM 7 C C06 YCE . . . C 2 -1.322 105.757 105.682 1 41.98 ? C06 YCE 301 A 1 
HETATM 8 C C07 YCE . . . C 2 -1.955 104.776 104.992 1 39.28 ? C07 YCE 301 A 1 
HETATM 9 C C09 YCE . . . C 2 -1.5 106.252 103.523 1 46.33 ? C09 YCE 301 A 1 
HETATM 10 C C11 YCE . . . C 2 -0.301 108.028 105.112 1 52.55 ? C11 YCE 301 A 1 
HETATM 11 C C14 YCE . . . C 2 1.138 108.262 102.548 1 56.56 ? C14 YCE 301 A 1 
HETATM 12 N N03 YCE . . . C 2 -2.22 103.437 107.153 1 31.32 ? N03 YCE 301 A 1 
HETATM 13 N N05 YCE . . . C 2 -1.099 105.633 107.128 1 33.97 ? N05 YCE 301 A 1 
HETATM 14 N N08 YCE . . . C 2 -2.053 105.08 103.712 1 35.04 ? N08 YCE 301 A 1 
HETATM 15 O O01 YCE . . . C 2 -2.927 102.79 105.189 1 32.37 ? O01 YCE 301 A 1 
HETATM 16 O O17 YCE . . . C 2 1.422 107.495 98.755 1 36.92 ? O17 YCE 301 A 1 
HETATM 17 O O18 YCE . . . C 2 0.877 109.727 99.339 1 40.17 ? O18 YCE 301 A 1 
HETATM 18 O O19 YCE . . . C 2 -0.687 108.103 99.877 1 41.28 ? O19 YCE 301 A 1 
HETATM 19 O O20 YCE . . . C 2 1.32 109.627 102.8 1 91.37 ? O20 YCE 301 A 1 
HETATM 20 P P16 YCE . . . C 2 0.759 108.317 99.728 1 39.2 ? P16 YCE 301 A 1 
HETATM 21 H H121 YCE . . . C 2 1.586 108.752 105.262 1 61.96 ? H121 YCE 301 A 1 
HETATM 22 H H131 YCE . . . C 2 2.726 107.439 103.75 1 62.66 ? H131 YCE 301 A 1 
HETATM 23 H H132 YCE . . . C 2 1.324 106.389 103.589 1 62.66 ? H132 YCE 301 A 1 
HETATM 24 H H152 YCE . . . C 2 2.738 108.264 101.14 1 47.51 ? H152 YCE 301 A 1 
HETATM 25 H H151 YCE . . . C 2 1.849 106.746 101.229 1 47.51 ? H151 YCE 301 A 1 
HETATM 26 H H041 YCE . . . C 2 -1.383 104.385 108.932 1 42.12 ? H041 YCE 301 A 1 
HETATM 27 H H091 YCE . . . C 2 -1.428 106.766 102.572 1 55.6 ? H091 YCE 301 A 1 
HETATM 28 H H112 YCE . . . C 2 -0.569 108.3 106.128 1 63.06 ? H112 YCE 301 A 1 
HETATM 29 H H111 YCE . . . C 2 -0.626 108.818 104.443 1 63.06 ? H111 YCE 301 A 1 
HETATM 30 H H141 YCE . . . C 2 0.073 108.107 102.455 1 67.88 ? H141 YCE 301 A 1 
HETATM 31 H H031 YCE . . . C 2 -2.537 102.612 107.624 1 37.58 ? H031 YCE 301 A 1 
HETATM 32 H H081 YCE . . . C 2 -2.482 104.514 103.007 1 42.04 ? H081 YCE 301 A 1 
HETATM 33 H H201 YCE . . . C 2 2.185 109.77 103.151 1 109.64 ? H201 YCE 301 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           33 
#