data_8FXZ
#
_model_server_result.job_id            zkRvDpbhyjZbuHvZG_Y4BQ 
_model_server_result.datetime_utc      '2025-03-12 11:48:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8fxz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"T","auth_seq_id":303}' 
#
_entry.id    8FXZ 
#
_exptl.entry_id    8FXZ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    21 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8FXZ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8FXZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetradecameric 
_pdbx_struct_assembly.oligomeric_count      14 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
? 3 FA N N 
? 3 GA N N 
? 3 HA N N 
? 3 IA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 42 A CYS 56 1_555 A SG CYS 203 A CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 111 A CYS 125 1_555 A SG CYS 143 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf3 A SG CYS 146 A CYS 160 1_555 A SG CYS 191 A CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 16 H CYS 16 1_555 B SG CYS 82 H CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 C SG CYS 42 B CYS 56 1_555 C SG CYS 203 B CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 C SG CYS 111 B CYS 125 1_555 C SG CYS 143 B CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf7 C SG CYS 146 B CYS 160 1_555 C SG CYS 191 B CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf8 D SG CYS 16 C CYS 16 1_555 D SG CYS 82 C CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 E SG CYS 42 D CYS 56 1_555 E SG CYS 203 D CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf10 E SG CYS 111 D CYS 125 1_555 E SG CYS 143 D CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf11 E SG CYS 146 D CYS 160 1_555 E SG CYS 191 D CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf12 F SG CYS 16 E CYS 16 1_555 F SG CYS 82 E CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf13 G SG CYS 42 F CYS 56 1_555 G SG CYS 203 F CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf14 G SG CYS 111 F CYS 125 1_555 G SG CYS 143 F CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf15 G SG CYS 146 F CYS 160 1_555 G SG CYS 191 F CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf16 H SG CYS 16 G CYS 16 1_555 H SG CYS 82 G CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf17 I SG CYS 42 I CYS 56 1_555 I SG CYS 203 I CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf18 I SG CYS 111 I CYS 125 1_555 I SG CYS 143 I CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf19 I SG CYS 146 I CYS 160 1_555 I SG CYS 191 I CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf20 J SG CYS 16 J CYS 16 1_555 J SG CYS 82 J CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf21 K SG CYS 42 K CYS 56 1_555 K SG CYS 203 K CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf22 K SG CYS 111 K CYS 125 1_555 K SG CYS 143 K CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf23 K SG CYS 146 K CYS 160 1_555 K SG CYS 191 K CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf24 L SG CYS 16 L CYS 16 1_555 L SG CYS 82 L CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf25 M SG CYS 42 M CYS 56 1_555 M SG CYS 203 M CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf26 M SG CYS 111 M CYS 125 1_555 M SG CYS 143 M CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf27 M SG CYS 146 M CYS 160 1_555 M SG CYS 191 M CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf28 N SG CYS 16 N CYS 16 1_555 N SG CYS 82 N CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 235 n n 
C1 O1 NAG sing 236 n n 
C1 O5 NAG sing 237 n n 
C1 H1 NAG sing 238 n n 
C2 C3 NAG sing 239 n n 
C2 N2 NAG sing 240 n n 
C2 H2 NAG sing 241 n n 
C3 C4 NAG sing 242 n n 
C3 O3 NAG sing 243 n n 
C3 H3 NAG sing 244 n n 
C4 C5 NAG sing 245 n n 
C4 O4 NAG sing 246 n n 
C4 H4 NAG sing 247 n n 
C5 C6 NAG sing 248 n n 
C5 O5 NAG sing 249 n n 
C5 H5 NAG sing 250 n n 
C6 O6 NAG sing 251 n n 
C6 H61 NAG sing 252 n n 
C6 H62 NAG sing 253 n n 
C7 C8 NAG sing 254 n n 
C7 N2 NAG sing 255 n n 
C7 O7 NAG doub 256 n n 
C8 H81 NAG sing 257 n n 
C8 H82 NAG sing 258 n n 
C8 H83 NAG sing 259 n n 
N2 HN2 NAG sing 260 n n 
O1 HO1 NAG sing 261 n n 
O3 HO3 NAG sing 262 n n 
O4 HO4 NAG sing 263 n n 
O6 HO6 NAG sing 264 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     8FXZ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 3 NAG A 1 301 301 NAG NAG . 
P 3 NAG A 1 302 302 NAG NAG . 
Q 3 NAG A 1 303 303 NAG NAG . 
R 3 NAG B 1 301 301 NAG NAG . 
S 3 NAG B 1 302 302 NAG NAG . 
T 3 NAG B 1 303 303 NAG NAG . 
U 3 NAG D 1 301 301 NAG NAG . 
V 3 NAG D 1 302 302 NAG NAG . 
W 3 NAG D 1 303 303 NAG NAG . 
X 3 NAG F 1 301 301 NAG NAG . 
Y 3 NAG F 1 302 302 NAG NAG . 
Z 3 NAG F 1 303 303 NAG NAG . 
AA 3 NAG I 1 301 301 NAG NAG . 
BA 3 NAG I 1 302 302 NAG NAG . 
CA 3 NAG I 1 303 303 NAG NAG . 
DA 3 NAG K 1 301 301 NAG NAG . 
EA 3 NAG K 1 302 302 NAG NAG . 
FA 3 NAG K 1 303 303 NAG NAG . 
GA 3 NAG M 1 301 301 NAG NAG . 
HA 3 NAG M 1 302 302 NAG NAG . 
IA 3 NAG M 1 303 303 NAG NAG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . T 3 171.094 110.904 118.259 1 49.42 ? C1 NAG 303 B 1 
HETATM 2 C C2 NAG . . . T 3 170.5 111.95 117.337 1 39.92 ? C2 NAG 303 B 1 
HETATM 3 C C3 NAG . . . T 3 169.199 111.437 116.737 1 49.41 ? C3 NAG 303 B 1 
HETATM 4 C C4 NAG . . . T 3 169.428 110.098 116.052 1 48.16 ? C4 NAG 303 B 1 
HETATM 5 C C5 NAG . . . T 3 170.095 109.12 117.012 1 50.04 ? C5 NAG 303 B 1 
HETATM 6 C C6 NAG . . . T 3 170.488 107.822 116.351 1 50.34 ? C6 NAG 303 B 1 
HETATM 7 C C7 NAG . . . T 3 171.241 113.836 118.716 1 48.49 ? C7 NAG 303 B 1 
HETATM 8 C C8 NAG . . . T 3 170.845 115.125 119.364 1 53.14 ? C8 NAG 303 B 1 
HETATM 9 N N2 NAG . . . T 3 170.282 113.205 118.034 1 38.14 ? N2 NAG 303 B 1 
HETATM 10 O O3 NAG . . . T 3 168.708 112.386 115.797 1 56.66 ? O3 NAG 303 B 1 
HETATM 11 O O4 NAG . . . T 3 168.187 109.553 115.62 1 54.97 ? O4 NAG 303 B 1 
HETATM 12 O O5 NAG . . . T 3 171.3 109.694 117.539 1 58.01 ? O5 NAG 303 B 1 
HETATM 13 O O6 NAG . . . T 3 170.528 106.755 117.289 1 52.56 ? O6 NAG 303 B 1 
HETATM 14 O O7 NAG . . . T 3 172.375 113.391 118.8 1 52.41 ? O7 NAG 303 B 1 
HETATM 15 H H2 NAG . . . T 3 171.129 112.105 116.607 1 48.21 ? H2 NAG 303 B 1 
HETATM 16 H H3 NAG . . . T 3 168.541 111.324 117.448 1 48.53 ? H3 NAG 303 B 1 
HETATM 17 H H4 NAG . . . T 3 170.007 110.229 115.277 1 48.57 ? H4 NAG 303 B 1 
HETATM 18 H H5 NAG . . . T 3 169.481 108.93 117.747 1 48.36 ? H5 NAG 303 B 1 
HETATM 19 H H61 NAG . . . T 3 171.369 107.924 115.944 1 48.87 ? H61 NAG 303 B 1 
HETATM 20 H H62 NAG . . . T 3 169.837 107.61 115.655 1 49.34 ? H62 NAG 303 B 1 
HETATM 21 H H81 NAG . . . T 3 171.605 115.488 119.855 1 49.35 ? H81 NAG 303 B 1 
HETATM 22 H H82 NAG . . . T 3 170.104 114.966 119.98 1 48.85 ? H82 NAG 303 B 1 
HETATM 23 H H83 NAG . . . T 3 170.567 115.761 118.678 1 49.59 ? H83 NAG 303 B 1 
HETATM 24 H HN2 NAG . . . T 3 169.453 113.583 117.999 1 48.11 ? HN2 NAG 303 B 1 
HETATM 25 H HO3 NAG . . . T 3 167.965 112.075 115.422 1 49.99 ? HO3 NAG 303 B 1 
HETATM 26 H HO4 NAG . . . T 3 168.292 109.167 114.828 1 49.63 ? HO4 NAG 303 B 1 
HETATM 27 H HO6 NAG . . . T 3 170.851 106.028 116.895 1 49.18 ? HO6 NAG 303 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    34 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          24 
_model_server_stats.element_count           27 
#