data_8FYX # _model_server_result.job_id jpEMK2zOUJ3ZNIatMVRl8g _model_server_result.datetime_utc '2024-10-11 00:25:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8fyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 8FYX # _exptl.entry_id 8FYX _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 385.503 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Buspirone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8FYX _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8FYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 239 _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 109 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 317 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 187 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.029 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H31 N5 O2' _chem_comp.formula_weight 385.503 _chem_comp.id YLX _chem_comp.mon_nstd_flag . _chem_comp.name Buspirone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Buspirone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 N3 YLX doub 587 n y C16 C17 YLX sing 588 n y N3 C15 YLX sing 589 n y C17 C18 YLX doub 590 n y C14 C13 YLX sing 591 n n C14 N2 YLX sing 592 n n C5 C6 YLX sing 593 n n C5 C4 YLX sing 594 n n C15 N2 YLX sing 595 n n C15 N4 YLX doub 596 n y C13 N1 YLX sing 597 n n N2 C19 YLX sing 598 n n C18 N4 YLX sing 599 n y C6 C2 YLX sing 600 n n C4 C3 YLX sing 601 n n N1 C20 YLX sing 602 n n N1 C12 YLX sing 603 n n C20 C19 YLX sing 604 n n C3 C2 YLX sing 605 n n C2 C1 YLX sing 606 n n C2 C7 YLX sing 607 n n C12 C11 YLX sing 608 n n O C YLX doub 609 n n C10 C11 YLX sing 610 n n C10 C9 YLX sing 611 n n C1 C YLX sing 612 n n C N YLX sing 613 n n C7 C8 YLX sing 614 n n N C8 YLX sing 615 n n N C9 YLX sing 616 n n C8 O1 YLX doub 617 n n C1 H1 YLX sing 618 n n C1 H2 YLX sing 619 n n C3 H3 YLX sing 620 n n C3 H4 YLX sing 621 n n C4 H5 YLX sing 622 n n C4 H6 YLX sing 623 n n C10 H7 YLX sing 624 n n C10 H8 YLX sing 625 n n C11 H9 YLX sing 626 n n C11 H10 YLX sing 627 n n C12 H11 YLX sing 628 n n C12 H12 YLX sing 629 n n C13 H13 YLX sing 630 n n C13 H14 YLX sing 631 n n C14 H15 YLX sing 632 n n C14 H16 YLX sing 633 n n C16 H17 YLX sing 634 n n C17 H18 YLX sing 635 n n C18 H19 YLX sing 636 n n C19 H20 YLX sing 637 n n C19 H21 YLX sing 638 n n C20 H22 YLX sing 639 n n C20 H23 YLX sing 640 n n C5 H24 YLX sing 641 n n C5 H25 YLX sing 642 n n C6 H26 YLX sing 643 n n C6 H27 YLX sing 644 n n C7 H28 YLX sing 645 n n C7 H29 YLX sing 646 n n C9 H30 YLX sing 647 n n C9 H31 YLX sing 648 n n # _atom_sites.entry_id 8FYX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 YLX R 1 501 501 YLX BUS . F 6 J40 R 1 502 506 J40 J40 . G 7 Y01 R 1 503 507 Y01 Y01 . H 7 Y01 R 1 504 508 Y01 Y01 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 YLX . . . E 5 137.1 127.13 167.889 1 76.33 ? C1 YLX 501 R 1 HETATM 2 C C2 YLX . . . E 5 138.386 127.78 167.337 1 76.33 ? C2 YLX 501 R 1 HETATM 3 C C3 YLX . . . E 5 139.484 126.702 167.173 1 76.33 ? C3 YLX 501 R 1 HETATM 4 C C4 YLX . . . E 5 139.061 125.936 165.92 1 76.33 ? C4 YLX 501 R 1 HETATM 5 N N YLX . . . E 5 136.382 129.375 168.57 1 76.33 ? N YLX 501 R 1 HETATM 6 C C YLX . . . E 5 136.042 128.196 167.933 1 76.33 ? C YLX 501 R 1 HETATM 7 O O YLX . . . E 5 134.945 128.06 167.409 1 76.33 ? O YLX 501 R 1 HETATM 8 C C10 YLX . . . E 5 135.16 131.456 167.887 1 76.33 ? C10 YLX 501 R 1 HETATM 9 C C11 YLX . . . E 5 135.615 132.814 168.453 1 76.33 ? C11 YLX 501 R 1 HETATM 10 C C12 YLX . . . E 5 135.714 133.912 167.397 1 76.33 ? C12 YLX 501 R 1 HETATM 11 C C13 YLX . . . E 5 136.251 134.272 165.003 1 76.33 ? C13 YLX 501 R 1 HETATM 12 C C14 YLX . . . E 5 137.439 135.015 164.393 1 76.33 ? C14 YLX 501 R 1 HETATM 13 C C15 YLX . . . E 5 138.688 137.064 164.98 1 76.33 ? C15 YLX 501 R 1 HETATM 14 C C16 YLX . . . E 5 139.647 138.272 163.327 1 76.33 ? C16 YLX 501 R 1 HETATM 15 C C17 YLX . . . E 5 140.244 139.1 164.247 1 76.33 ? C17 YLX 501 R 1 HETATM 16 C C18 YLX . . . E 5 139.947 138.85 165.562 1 76.33 ? C18 YLX 501 R 1 HETATM 17 C C19 YLX . . . E 5 138.414 135.271 166.612 1 76.33 ? C19 YLX 501 R 1 HETATM 18 C C20 YLX . . . E 5 138.045 133.795 166.61 1 76.33 ? C20 YLX 501 R 1 HETATM 19 C C5 YLX . . . E 5 138.426 127.048 164.976 1 76.33 ? C5 YLX 501 R 1 HETATM 20 C C6 YLX . . . E 5 138.241 128.297 165.876 1 76.33 ? C6 YLX 501 R 1 HETATM 21 C C7 YLX . . . E 5 138.799 128.893 168.324 1 76.33 ? C7 YLX 501 R 1 HETATM 22 C C8 YLX . . . E 5 137.693 129.739 168.895 1 76.33 ? C8 YLX 501 R 1 HETATM 23 C C9 YLX . . . E 5 135.294 130.315 168.906 1 76.33 ? C9 YLX 501 R 1 HETATM 24 N N1 YLX . . . E 5 136.618 133.598 166.274 1 76.33 ? N1 YLX 501 R 1 HETATM 25 N N2 YLX . . . E 5 138.034 135.939 165.364 1 76.33 ? N2 YLX 501 R 1 HETATM 26 N N3 YLX . . . E 5 138.87 137.238 163.665 1 76.33 ? N3 YLX 501 R 1 HETATM 27 N N4 YLX . . . E 5 139.168 137.841 165.96 1 76.33 ? N4 YLX 501 R 1 HETATM 28 O O1 YLX . . . E 5 137.916 130.691 169.63 1 76.33 ? O1 YLX 501 R 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #