data_8G1N # _model_server_result.job_id SWG0ToPAnwyogho4cYYCiA _model_server_result.datetime_utc '2024-10-10 10:19:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8g1n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 8G1N # _exptl.entry_id 8G1N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8G1N _cell.length_a 70.802 _cell.length_b 70.802 _cell.length_c 188.442 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8G1N _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 92 A ARG 88 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc2 A OD1 ASP 97 A ASP 93 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc3 C MG MG . A MG 301 1_555 D O2 PO4 . A PO4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc4 C MG MG . A MG 301 1_555 D O3 PO4 . A PO4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc5 B OE2 GLU 98 B GLU 94 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc6 G MG MG . B MG 301 1_555 J O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 344 n n O1 HO1 PG4 sing 345 n n C1 C2 PG4 sing 346 n n C1 H11 PG4 sing 347 n n C1 H12 PG4 sing 348 n n C2 O2 PG4 sing 349 n n C2 H21 PG4 sing 350 n n C2 H22 PG4 sing 351 n n O2 C3 PG4 sing 352 n n C3 C4 PG4 sing 353 n n C3 H31 PG4 sing 354 n n C3 H32 PG4 sing 355 n n C4 O3 PG4 sing 356 n n C4 H41 PG4 sing 357 n n C4 H42 PG4 sing 358 n n O3 C5 PG4 sing 359 n n C5 C6 PG4 sing 360 n n C5 H51 PG4 sing 361 n n C5 H52 PG4 sing 362 n n C6 O4 PG4 sing 363 n n C6 H61 PG4 sing 364 n n C6 H62 PG4 sing 365 n n O4 C7 PG4 sing 366 n n C7 C8 PG4 sing 367 n n C7 H71 PG4 sing 368 n n C7 H72 PG4 sing 369 n n C8 O5 PG4 sing 370 n n C8 H81 PG4 sing 371 n n C8 H82 PG4 sing 372 n n O5 HO5 PG4 sing 373 n n # _atom_sites.entry_id 8G1N _atom_sites.fract_transf_matrix[1][1] 0.014124 _atom_sites.fract_transf_matrix[1][2] 0.008154 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016309 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005307 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 301 301 MG MG . D 3 PO4 A 1 302 302 PO4 PO4 . E 4 PEF A 1 303 303 PEF PEF . F 5 PG4 A 1 304 305 PG4 PG4 . G 2 MG B 1 301 301 MG MG . H 4 PEF B 1 302 302 PEF PEF . I 6 HOH A 1 401 401 HOH HOH . I 6 HOH A 2 402 404 HOH HOH . I 6 HOH A 3 403 402 HOH HOH . I 6 HOH A 4 404 403 HOH HOH . I 6 HOH A 5 405 406 HOH HOH . I 6 HOH A 6 406 405 HOH HOH . I 6 HOH A 7 407 407 HOH HOH . I 6 HOH A 8 408 408 HOH HOH . I 6 HOH A 9 409 412 HOH HOH . I 6 HOH A 10 410 411 HOH HOH . I 6 HOH A 11 411 409 HOH HOH . I 6 HOH A 12 412 410 HOH HOH . J 6 HOH B 1 401 402 HOH HOH . J 6 HOH B 2 402 401 HOH HOH . J 6 HOH B 3 403 404 HOH HOH . J 6 HOH B 4 404 405 HOH HOH . J 6 HOH B 5 405 406 HOH HOH . J 6 HOH B 6 406 403 HOH HOH . J 6 HOH B 7 407 407 HOH HOH . J 6 HOH B 8 408 408 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 5 59.18 3.248 -36.507 1 57.72 ? O1 PG4 304 A 1 HETATM 2 C C1 PG4 . . . F 5 57.773 3.253 -36.332 1 58.15 ? C1 PG4 304 A 1 HETATM 3 C C2 PG4 . . . F 5 57.291 4.575 -35.82 1 69.17 ? C2 PG4 304 A 1 HETATM 4 O O2 PG4 . . . F 5 55.889 4.683 -36.023 1 65.57 ? O2 PG4 304 A 1 HETATM 5 C C3 PG4 . . . F 5 55.376 5.96 -35.67 1 70.33 ? C3 PG4 304 A 1 HETATM 6 C C4 PG4 . . . F 5 54.127 6.235 -36.44 1 75.22 ? C4 PG4 304 A 1 HETATM 7 O O3 PG4 . . . F 5 52.991 6.121 -35.596 1 74.25 ? O3 PG4 304 A 1 HETATM 8 C C5 PG4 . . . F 5 52.214 7.29 -35.808 1 76.03 ? C5 PG4 304 A 1 HETATM 9 C C6 PG4 . . . F 5 51.087 7.322 -34.831 1 90.64 ? C6 PG4 304 A 1 HETATM 10 O O4 PG4 . . . F 5 50.551 8.635 -34.777 1 90.03 ? O4 PG4 304 A 1 HETATM 11 C C7 PG4 . . . F 5 49.253 8.527 -34.212 1 85.62 ? C7 PG4 304 A 1 HETATM 12 C C8 PG4 . . . F 5 48.76 9.887 -33.824 1 99.6 ? C8 PG4 304 A 1 HETATM 13 O O5 PG4 . . . F 5 48.557 10.674 -34.986 1 84.13 ? O5 PG4 304 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 123 _model_server_stats.create_model_time_ms 56 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 37 _model_server_stats.element_count 13 #