data_8G1P # _model_server_result.job_id gSbC7-x3xzJzjiLWFd-6-w _model_server_result.datetime_utc '2024-10-19 22:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8g1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 8G1P # _exptl.entry_id 8G1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8G1P _cell.length_a 79.523 _cell.length_b 115.672 _cell.length_c 119.654 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8G1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,I,J,M,N,O,S 1 1 D,E,F,H,K,L,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 L N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 260 n n C1 C2 GOL sing 261 n n C1 H11 GOL sing 262 n n C1 H12 GOL sing 263 n n O1 HO1 GOL sing 264 n n C2 O2 GOL sing 265 n n C2 C3 GOL sing 266 n n C2 H2 GOL sing 267 n n O2 HO2 GOL sing 268 n n C3 O3 GOL sing 269 n n C3 H31 GOL sing 270 n n C3 H32 GOL sing 271 n n O3 HO3 GOL sing 272 n n # _atom_sites.entry_id 8G1P _atom_sites.fract_transf_matrix[1][1] 0.012575 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008357 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 GOL A 1 201 201 GOL GOL . J 6 FWZ C 1 301 1 FWZ UNL . K 6 FWZ F 1 301 2 FWZ UNL . L 5 GOL H 1 1501 1501 GOL GOL . M 7 HOH A 1 301 53 HOH HOH . M 7 HOH A 2 302 45 HOH HOH . M 7 HOH A 3 303 71 HOH HOH . M 7 HOH A 4 304 34 HOH HOH . M 7 HOH A 5 305 191 HOH HOH . M 7 HOH A 6 306 8 HOH HOH . M 7 HOH A 7 307 137 HOH HOH . M 7 HOH A 8 308 27 HOH HOH . M 7 HOH A 9 309 42 HOH HOH . M 7 HOH A 10 310 20 HOH HOH . M 7 HOH A 11 311 39 HOH HOH . M 7 HOH A 12 312 6 HOH HOH . M 7 HOH A 13 313 41 HOH HOH . M 7 HOH A 14 314 151 HOH HOH . M 7 HOH A 15 315 37 HOH HOH . M 7 HOH A 16 316 49 HOH HOH . M 7 HOH A 17 317 51 HOH HOH . M 7 HOH A 18 318 122 HOH HOH . M 7 HOH A 19 319 167 HOH HOH . M 7 HOH A 20 320 23 HOH HOH . M 7 HOH A 21 321 63 HOH HOH . M 7 HOH A 22 322 24 HOH HOH . M 7 HOH A 23 323 206 HOH HOH . N 7 HOH B 1 201 52 HOH HOH . N 7 HOH B 2 202 108 HOH HOH . N 7 HOH B 3 203 127 HOH HOH . N 7 HOH B 4 204 159 HOH HOH . N 7 HOH B 5 205 3 HOH HOH . N 7 HOH B 6 206 26 HOH HOH . N 7 HOH B 7 207 64 HOH HOH . N 7 HOH B 8 208 102 HOH HOH . N 7 HOH B 9 209 7 HOH HOH . N 7 HOH B 10 210 180 HOH HOH . N 7 HOH B 11 211 100 HOH HOH . N 7 HOH B 12 212 129 HOH HOH . N 7 HOH B 13 213 112 HOH HOH . N 7 HOH B 14 214 17 HOH HOH . N 7 HOH B 15 215 189 HOH HOH . N 7 HOH B 16 216 194 HOH HOH . N 7 HOH B 17 217 91 HOH HOH . N 7 HOH B 18 218 152 HOH HOH . O 7 HOH C 1 401 126 HOH HOH . O 7 HOH C 2 402 120 HOH HOH . O 7 HOH C 3 403 50 HOH HOH . O 7 HOH C 4 404 43 HOH HOH . O 7 HOH C 5 405 1 HOH HOH . O 7 HOH C 6 406 208 HOH HOH . O 7 HOH C 7 407 4 HOH HOH . O 7 HOH C 8 408 131 HOH HOH . O 7 HOH C 9 409 113 HOH HOH . O 7 HOH C 10 410 33 HOH HOH . O 7 HOH C 11 411 94 HOH HOH . O 7 HOH C 12 412 149 HOH HOH . O 7 HOH C 13 413 124 HOH HOH . O 7 HOH C 14 414 59 HOH HOH . O 7 HOH C 15 415 29 HOH HOH . O 7 HOH C 16 416 116 HOH HOH . O 7 HOH C 17 417 73 HOH HOH . O 7 HOH C 18 418 19 HOH HOH . O 7 HOH C 19 419 143 HOH HOH . O 7 HOH C 20 420 192 HOH HOH . O 7 HOH C 21 421 55 HOH HOH . O 7 HOH C 22 422 130 HOH HOH . O 7 HOH C 23 423 150 HOH HOH . O 7 HOH C 24 424 199 HOH HOH . O 7 HOH C 25 425 198 HOH HOH . O 7 HOH C 26 426 193 HOH HOH . O 7 HOH C 27 427 181 HOH HOH . O 7 HOH C 28 428 184 HOH HOH . O 7 HOH C 29 429 161 HOH HOH . O 7 HOH C 30 430 139 HOH HOH . O 7 HOH C 31 431 160 HOH HOH . O 7 HOH C 32 432 148 HOH HOH . P 7 HOH D 1 201 82 HOH HOH . P 7 HOH D 2 202 172 HOH HOH . P 7 HOH D 3 203 171 HOH HOH . P 7 HOH D 4 204 46 HOH HOH . P 7 HOH D 5 205 21 HOH HOH . P 7 HOH D 6 206 22 HOH HOH . P 7 HOH D 7 207 163 HOH HOH . P 7 HOH D 8 208 78 HOH HOH . P 7 HOH D 9 209 69 HOH HOH . P 7 HOH D 10 210 35 HOH HOH . P 7 HOH D 11 211 173 HOH HOH . P 7 HOH D 12 212 15 HOH HOH . P 7 HOH D 13 213 66 HOH HOH . P 7 HOH D 14 214 174 HOH HOH . P 7 HOH D 15 215 196 HOH HOH . P 7 HOH D 16 216 70 HOH HOH . P 7 HOH D 17 217 177 HOH HOH . P 7 HOH D 18 218 140 HOH HOH . P 7 HOH D 19 219 114 HOH HOH . P 7 HOH D 20 220 16 HOH HOH . P 7 HOH D 21 221 204 HOH HOH . P 7 HOH D 22 222 190 HOH HOH . P 7 HOH D 23 223 119 HOH HOH . P 7 HOH D 24 224 195 HOH HOH . P 7 HOH D 25 225 62 HOH HOH . P 7 HOH D 26 226 205 HOH HOH . P 7 HOH D 27 227 185 HOH HOH . P 7 HOH D 28 228 85 HOH HOH . P 7 HOH D 29 229 164 HOH HOH . Q 7 HOH E 1 201 83 HOH HOH . Q 7 HOH E 2 202 10 HOH HOH . Q 7 HOH E 3 203 79 HOH HOH . Q 7 HOH E 4 204 30 HOH HOH . Q 7 HOH E 5 205 44 HOH HOH . Q 7 HOH E 6 206 13 HOH HOH . Q 7 HOH E 7 207 36 HOH HOH . Q 7 HOH E 8 208 89 HOH HOH . Q 7 HOH E 9 209 90 HOH HOH . Q 7 HOH E 10 210 138 HOH HOH . Q 7 HOH E 11 211 81 HOH HOH . R 7 HOH F 1 401 5 HOH HOH . R 7 HOH F 2 402 47 HOH HOH . R 7 HOH F 3 403 11 HOH HOH . R 7 HOH F 4 404 99 HOH HOH . R 7 HOH F 5 405 68 HOH HOH . R 7 HOH F 6 406 93 HOH HOH . R 7 HOH F 7 407 158 HOH HOH . R 7 HOH F 8 408 12 HOH HOH . R 7 HOH F 9 409 67 HOH HOH . R 7 HOH F 10 410 48 HOH HOH . R 7 HOH F 11 411 61 HOH HOH . R 7 HOH F 12 412 101 HOH HOH . R 7 HOH F 13 413 9 HOH HOH . R 7 HOH F 14 414 31 HOH HOH . R 7 HOH F 15 415 25 HOH HOH . R 7 HOH F 16 416 97 HOH HOH . R 7 HOH F 17 417 28 HOH HOH . R 7 HOH F 18 418 183 HOH HOH . R 7 HOH F 19 419 74 HOH HOH . R 7 HOH F 20 420 147 HOH HOH . R 7 HOH F 21 421 92 HOH HOH . R 7 HOH F 22 422 169 HOH HOH . R 7 HOH F 23 423 54 HOH HOH . R 7 HOH F 24 424 182 HOH HOH . R 7 HOH F 25 425 179 HOH HOH . R 7 HOH F 26 426 157 HOH HOH . R 7 HOH F 27 427 186 HOH HOH . R 7 HOH F 28 428 86 HOH HOH . R 7 HOH F 29 429 207 HOH HOH . R 7 HOH F 30 430 154 HOH HOH . R 7 HOH F 31 431 111 HOH HOH . R 7 HOH F 32 432 176 HOH HOH . R 7 HOH F 33 433 32 HOH HOH . R 7 HOH F 34 434 188 HOH HOH . R 7 HOH F 35 435 56 HOH HOH . R 7 HOH F 36 436 95 HOH HOH . R 7 HOH F 37 437 165 HOH HOH . R 7 HOH F 38 438 155 HOH HOH . R 7 HOH F 39 439 197 HOH HOH . R 7 HOH F 40 440 134 HOH HOH . R 7 HOH F 41 441 115 HOH HOH . S 7 HOH G 1 1501 96 HOH HOH . S 7 HOH G 2 1502 60 HOH HOH . S 7 HOH G 3 1503 40 HOH HOH . S 7 HOH G 4 1504 109 HOH HOH . S 7 HOH G 5 1505 88 HOH HOH . S 7 HOH G 6 1506 87 HOH HOH . S 7 HOH G 7 1507 136 HOH HOH . S 7 HOH G 8 1508 135 HOH HOH . S 7 HOH G 9 1509 84 HOH HOH . S 7 HOH G 10 1510 98 HOH HOH . S 7 HOH G 11 1511 168 HOH HOH . S 7 HOH G 12 1512 65 HOH HOH . S 7 HOH G 13 1513 170 HOH HOH . S 7 HOH G 14 1514 187 HOH HOH . S 7 HOH G 15 1515 178 HOH HOH . T 7 HOH H 1 1601 80 HOH HOH . T 7 HOH H 2 1602 14 HOH HOH . T 7 HOH H 3 1603 128 HOH HOH . T 7 HOH H 4 1604 58 HOH HOH . T 7 HOH H 5 1605 132 HOH HOH . T 7 HOH H 6 1606 142 HOH HOH . T 7 HOH H 7 1607 146 HOH HOH . T 7 HOH H 8 1608 2 HOH HOH . T 7 HOH H 9 1609 76 HOH HOH . T 7 HOH H 10 1610 106 HOH HOH . T 7 HOH H 11 1611 125 HOH HOH . T 7 HOH H 12 1612 57 HOH HOH . T 7 HOH H 13 1613 103 HOH HOH . T 7 HOH H 14 1614 77 HOH HOH . T 7 HOH H 15 1615 72 HOH HOH . T 7 HOH H 16 1616 203 HOH HOH . T 7 HOH H 17 1617 141 HOH HOH . T 7 HOH H 18 1618 202 HOH HOH . T 7 HOH H 19 1619 200 HOH HOH . T 7 HOH H 20 1620 153 HOH HOH . T 7 HOH H 21 1621 175 HOH HOH . T 7 HOH H 22 1622 123 HOH HOH . T 7 HOH H 23 1623 201 HOH HOH . T 7 HOH H 24 1624 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 5 10.669 -16.505 -13.691 1 45.73 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . I 5 9.65 -17.247 -13.098 1 53.03 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . I 5 11.783 -17.506 -14.047 1 57.28 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . I 5 11.684 -17.961 -15.355 1 54.25 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . I 5 13.097 -16.744 -13.784 1 54.97 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . I 5 14.113 -17.693 -13.83 1 58.33 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #