data_8G46 # _model_server_result.job_id '_vEFlE4498XgWkJwJ8YVhg' _model_server_result.datetime_utc '2024-10-19 05:29:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8g46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 8G46 # _exptl.entry_id 8G46 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8G46 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8G46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 62 B CYS 58 1_555 F C11 YK3 . B YK3 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc1 B SG CYS 104 B CYS 100 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc2 B SG CYS 107 B CYS 103 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc3 B SG CYS 181 B CYS 177 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc4 B SG CYS 183 B CYS 179 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8G46 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN B 1 1001 1001 ZN ZN . F 6 YK3 B 1 1002 501 YK3 MMH . G 7 HOH A 1 1201 33 HOH HOH . G 7 HOH A 2 1202 46 HOH HOH . G 7 HOH A 3 1203 119 HOH HOH . G 7 HOH A 4 1204 89 HOH HOH . G 7 HOH A 5 1205 40 HOH HOH . G 7 HOH A 6 1206 24 HOH HOH . G 7 HOH A 7 1207 137 HOH HOH . G 7 HOH A 8 1208 11 HOH HOH . G 7 HOH A 9 1209 84 HOH HOH . G 7 HOH A 10 1210 134 HOH HOH . G 7 HOH A 11 1211 63 HOH HOH . G 7 HOH A 12 1212 81 HOH HOH . G 7 HOH A 13 1213 85 HOH HOH . G 7 HOH A 14 1214 3 HOH HOH . G 7 HOH A 15 1215 15 HOH HOH . G 7 HOH A 16 1216 150 HOH HOH . G 7 HOH A 17 1217 26 HOH HOH . G 7 HOH A 18 1218 90 HOH HOH . G 7 HOH A 19 1219 55 HOH HOH . G 7 HOH A 20 1220 152 HOH HOH . G 7 HOH A 21 1221 72 HOH HOH . G 7 HOH A 22 1222 22 HOH HOH . G 7 HOH A 23 1223 91 HOH HOH . G 7 HOH A 24 1224 43 HOH HOH . G 7 HOH A 25 1225 54 HOH HOH . G 7 HOH A 26 1226 197 HOH HOH . G 7 HOH A 27 1227 80 HOH HOH . G 7 HOH A 28 1228 37 HOH HOH . G 7 HOH A 29 1229 50 HOH HOH . G 7 HOH A 30 1230 7 HOH HOH . G 7 HOH A 31 1231 109 HOH HOH . G 7 HOH A 32 1232 161 HOH HOH . G 7 HOH A 33 1233 14 HOH HOH . G 7 HOH A 34 1234 153 HOH HOH . G 7 HOH A 35 1235 29 HOH HOH . G 7 HOH A 36 1236 79 HOH HOH . G 7 HOH A 37 1237 140 HOH HOH . G 7 HOH A 38 1238 25 HOH HOH . G 7 HOH A 39 1239 141 HOH HOH . G 7 HOH A 40 1240 36 HOH HOH . G 7 HOH A 41 1241 9 HOH HOH . G 7 HOH A 42 1242 41 HOH HOH . G 7 HOH A 43 1243 32 HOH HOH . G 7 HOH A 44 1244 170 HOH HOH . G 7 HOH A 45 1245 73 HOH HOH . G 7 HOH A 46 1246 51 HOH HOH . G 7 HOH A 47 1247 160 HOH HOH . G 7 HOH A 48 1248 34 HOH HOH . G 7 HOH A 49 1249 2 HOH HOH . G 7 HOH A 50 1250 27 HOH HOH . G 7 HOH A 51 1251 18 HOH HOH . G 7 HOH A 52 1252 4 HOH HOH . G 7 HOH A 53 1253 35 HOH HOH . G 7 HOH A 54 1254 174 HOH HOH . G 7 HOH A 55 1255 42 HOH HOH . G 7 HOH A 56 1256 75 HOH HOH . G 7 HOH A 57 1257 20 HOH HOH . G 7 HOH A 58 1258 52 HOH HOH . G 7 HOH A 59 1259 58 HOH HOH . G 7 HOH A 60 1260 176 HOH HOH . G 7 HOH A 61 1261 6 HOH HOH . G 7 HOH A 62 1262 106 HOH HOH . G 7 HOH A 63 1263 104 HOH HOH . G 7 HOH A 64 1264 21 HOH HOH . G 7 HOH A 65 1265 183 HOH HOH . G 7 HOH A 66 1266 38 HOH HOH . G 7 HOH A 67 1267 47 HOH HOH . G 7 HOH A 68 1268 10 HOH HOH . G 7 HOH A 69 1269 82 HOH HOH . G 7 HOH A 70 1270 99 HOH HOH . G 7 HOH A 71 1271 74 HOH HOH . G 7 HOH A 72 1272 62 HOH HOH . G 7 HOH A 73 1273 71 HOH HOH . G 7 HOH A 74 1274 45 HOH HOH . G 7 HOH A 75 1275 5 HOH HOH . G 7 HOH A 76 1276 17 HOH HOH . G 7 HOH A 77 1277 60 HOH HOH . G 7 HOH A 78 1278 94 HOH HOH . G 7 HOH A 79 1279 114 HOH HOH . G 7 HOH A 80 1280 181 HOH HOH . G 7 HOH A 81 1281 118 HOH HOH . G 7 HOH A 82 1282 139 HOH HOH . G 7 HOH A 83 1283 158 HOH HOH . G 7 HOH A 84 1284 111 HOH HOH . G 7 HOH A 85 1285 61 HOH HOH . G 7 HOH A 86 1286 105 HOH HOH . G 7 HOH A 87 1287 48 HOH HOH . G 7 HOH A 88 1288 122 HOH HOH . G 7 HOH A 89 1289 151 HOH HOH . G 7 HOH A 90 1290 169 HOH HOH . G 7 HOH A 91 1291 163 HOH HOH . G 7 HOH A 92 1292 244 HOH HOH . G 7 HOH A 93 1293 249 HOH HOH . G 7 HOH A 94 1294 250 HOH HOH . G 7 HOH A 95 1295 248 HOH HOH . H 7 HOH B 1 1101 252 HOH HOH . H 7 HOH B 2 1102 86 HOH HOH . H 7 HOH B 3 1103 8 HOH HOH . H 7 HOH B 4 1104 31 HOH HOH . H 7 HOH B 5 1105 116 HOH HOH . H 7 HOH B 6 1106 93 HOH HOH . H 7 HOH B 7 1107 70 HOH HOH . H 7 HOH B 8 1108 56 HOH HOH . H 7 HOH B 9 1109 19 HOH HOH . H 7 HOH B 10 1110 65 HOH HOH . H 7 HOH B 11 1111 132 HOH HOH . H 7 HOH B 12 1112 157 HOH HOH . H 7 HOH B 13 1113 16 HOH HOH . H 7 HOH B 14 1114 228 HOH HOH . H 7 HOH B 15 1115 198 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 139.212 _atom_site.Cartn_y 122.004 _atom_site.Cartn_z 102.791 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #